EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000013625 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2421 bases
Position: chrAVPZ01000234.1:2030841-2033261
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012865	RNA_pol_L_2	PF13656.6	2e-29	1	1
ENSCAPP00000012872	RNA_pol_L_2	PF13656.6	3.2e-29	1	1
ENSCAPP00000012865	RNA_pol_L	PF01193.24	2.1e-10	1	1
ENSCAPP00000012872	RNA_pol_L	PF01193.24	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016630	-	414	-	ENSCAPP00000012872	137 (aa)	-	-
ENSCAPT00000016623	-	348	-	ENSCAPP00000012865	115 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000013625	-	56	31.250	ENSCAPG00000006058	-	65	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013625	-	96	84.426	ENSANAG00000020385	-	82	98.592	Aotus_nancymaae
ENSCAPG00000013625	-	96	91.964	ENSBTAG00000005446	POLR2J	96	91.964	Bos_taurus
ENSCAPG00000013625	-	96	91.964	ENSCAFG00020013154	-	96	91.964	Canis_lupus_dingo
ENSCAPG00000013625	-	96	91.964	ENSCHIG00000009008	-	96	91.964	Capra_hircus
ENSCAPG00000013625	-	96	91.964	ENSCCAG00000029378	-	96	91.964	Cebus_capucinus
ENSCAPG00000013625	-	51	100.000	ENSCHOG00000008325	-	54	100.000	Choloepus_hoffmanni
ENSCAPG00000013625	-	86	100.000	ENSCPBG00000027774	-	83	100.000	Chrysemys_picta_bellii
ENSCAPG00000013625	-	96	91.964	ENSECAG00000022750	-	96	91.964	Equus_caballus
ENSCAPG00000013625	-	79	97.802	ENSGGOG00000038950	-	53	97.802	Gorilla_gorilla
ENSCAPG00000013625	-	51	77.143	ENSGGOG00000043186	-	71	77.049	Gorilla_gorilla
ENSCAPG00000013625	-	61	84.722	ENSGGOG00000003934	-	85	84.722	Gorilla_gorilla
ENSCAPG00000013625	-	54	93.548	ENSLACG00000022567	-	59	93.548	Latimeria_chalumnae
ENSCAPG00000013625	-	96	82.400	ENSMFAG00000039168	-	82	98.592	Macaca_fascicularis
ENSCAPG00000013625	-	96	91.964	ENSMLEG00000033262	-	96	91.964	Mandrillus_leucophaeus
ENSCAPG00000013625	-	96	91.964	ENSMICG00000010323	-	96	91.964	Microcebus_murinus
ENSCAPG00000013625	-	77	71.910	ENSPTRG00000052689	-	61	69.307	Pan_troglodytes
ENSCAPG00000013625	-	90	65.094	ENSPTRG00000050290	-	71	84.375	Pan_troglodytes
ENSCAPG00000013625	-	96	91.964	ENSPTRG00000019132	-	96	91.964	Pan_troglodytes
ENSCAPG00000013625	-	70	76.250	ENSPTRG00000028611	-	58	89.855	Pan_troglodytes
ENSCAPG00000013625	-	96	71.429	ENSPANG00000015179	-	82	98.592	Papio_anubis
ENSCAPG00000013625	-	96	88.393	ENSPKIG00000013014	-	96	88.393	Paramormyrops_kingsleyae
ENSCAPG00000013625	-	78	98.889	ENSPCAG00000003269	-	52	98.889	Procavia_capensis
ENSCAPG00000013625	-	96	91.964	ENSRBIG00000042413	-	96	91.964	Rhinopithecus_bieti
ENSCAPG00000013625	-	96	83.065	ENSRROG00000035578	-	91	90.196	Rhinopithecus_roxellana
ENSCAPG00000013625	-	77	100.000	ENSTTRG00000014846	-	70	94.898	Tursiops_truncatus
ENSCAPG00000013625	-	96	91.964	ENSVVUG00000023727	-	96	91.964	Vulpes_vulpes