EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013631 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 88892 bases
Position: chrAVPZ01000100.1:27975995-28064886
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000012897	PPR	PF01535.20	5.3e-30	1	4
ENSCAPP00000012897	PPR	PF01535.20	5.3e-30	2	4
ENSCAPP00000012897	PPR	PF01535.20	5.3e-30	3	4
ENSCAPP00000012897	PPR	PF01535.20	5.3e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016655	LRPPRC-201	3450	-	ENSCAPP00000012897	1149 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013631's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013631	LRPPRC	99	42.336	ENSAPOG00000016610	lrpprc	94	42.336	Acanthochromis_polyacanthus
ENSCAPG00000013631	LRPPRC	98	62.082	ENSAMEG00000005852	LRPPRC	97	63.482	Ailuropoda_melanoleuca
ENSCAPG00000013631	LRPPRC	97	43.235	ENSACIG00000009604	lrpprc	92	43.235	Amphilophus_citrinellus
ENSCAPG00000013631	LRPPRC	99	41.653	ENSAOCG00000005886	lrpprc	94	41.653	Amphiprion_ocellaris
ENSCAPG00000013631	LRPPRC	97	44.588	ENSAPEG00000002937	lrpprc	94	44.588	Amphiprion_percula
ENSCAPG00000013631	LRPPRC	97	44.075	ENSATEG00000010555	lrpprc	95	43.994	Anabas_testudineus
ENSCAPG00000013631	LRPPRC	99	48.763	ENSACAG00000029278	LRPPRC	96	48.763	Anolis_carolinensis
ENSCAPG00000013631	LRPPRC	99	61.172	ENSANAG00000027440	LRPPRC	96	61.172	Aotus_nancymaae
ENSCAPG00000013631	LRPPRC	97	42.781	ENSACLG00000023712	lrpprc	97	42.781	Astatotilapia_calliptera
ENSCAPG00000013631	LRPPRC	99	61.099	ENSCJAG00000000794	LRPPRC	96	61.099	Callithrix_jacchus
ENSCAPG00000013631	LRPPRC	99	62.279	ENSCHIG00000020173	LRPPRC	98	62.122	Capra_hircus
ENSCAPG00000013631	LRPPRC	88	75.082	ENSCPOG00000000204	LRPPRC	100	75.082	Cavia_porcellus
ENSCAPG00000013631	LRPPRC	99	61.087	ENSCCAG00000031900	LRPPRC	96	61.087	Cebus_capucinus
ENSCAPG00000013631	LRPPRC	99	61.217	ENSCATG00000014187	LRPPRC	90	64.033	Cercocebus_atys
ENSCAPG00000013631	LRPPRC	99	67.084	ENSCLAG00000005203	LRPPRC	96	67.084	Chinchilla_lanigera
ENSCAPG00000013631	LRPPRC	99	61.685	ENSCSAG00000013233	LRPPRC	96	61.685	Chlorocebus_sabaeus
ENSCAPG00000013631	LRPPRC	87	63.667	ENSCHOG00000003631	LRPPRC	81	63.667	Choloepus_hoffmanni
ENSCAPG00000013631	LRPPRC	99	59.545	ENSCANG00000034961	LRPPRC	100	82.266	Colobus_angolensis_palliatus
ENSCAPG00000013631	LRPPRC	100	59.735	ENSCGRG00001016261	Lrpprc	96	59.735	Cricetulus_griseus_chok1gshd
ENSCAPG00000013631	LRPPRC	100	59.735	ENSCGRG00000004072	Lrpprc	96	59.735	Cricetulus_griseus_crigri
ENSCAPG00000013631	LRPPRC	99	37.262	ENSCSEG00000003850	lrpprc	87	47.775	Cynoglossus_semilaevis
ENSCAPG00000013631	LRPPRC	99	40.464	ENSCVAG00000012967	lrpprc	95	40.464	Cyprinodon_variegatus
ENSCAPG00000013631	LRPPRC	99	38.966	ENSDARG00000043970	lrpprc	93	38.966	Danio_rerio
ENSCAPG00000013631	LRPPRC	99	61.087	ENSDNOG00000012594	-	96	61.087	Dasypus_novemcinctus
ENSCAPG00000013631	LRPPRC	81	47.523	ENSDNOG00000032336	-	95	47.523	Dasypus_novemcinctus
ENSCAPG00000013631	LRPPRC	100	64.118	ENSDORG00000012233	Lrpprc	96	64.118	Dipodomys_ordii
ENSCAPG00000013631	LRPPRC	99	59.985	ENSETEG00000006657	LRPPRC	96	59.985	Echinops_telfairi
ENSCAPG00000013631	LRPPRC	80	65.789	ENSEEUG00000012340	LRPPRC	80	65.789	Erinaceus_europaeus
ENSCAPG00000013631	LRPPRC	99	43.124	ENSELUG00000012803	lrpprc	98	43.124	Esox_lucius
ENSCAPG00000013631	LRPPRC	99	63.456	ENSFCAG00000013468	LRPPRC	96	63.456	Felis_catus
ENSCAPG00000013631	LRPPRC	99	43.967	ENSFALG00000012738	LRPPRC	99	43.967	Ficedula_albicollis
ENSCAPG00000013631	LRPPRC	100	63.216	ENSFDAG00000015328	LRPPRC	96	63.216	Fukomys_damarensis
ENSCAPG00000013631	LRPPRC	98	39.543	ENSFHEG00000019604	lrpprc	94	39.543	Fundulus_heteroclitus
ENSCAPG00000013631	LRPPRC	99	40.222	ENSGMOG00000008337	lrpprc	96	40.222	Gadus_morhua
ENSCAPG00000013631	LRPPRC	99	41.679	ENSGAFG00000001455	lrpprc	95	41.679	Gambusia_affinis
ENSCAPG00000013631	LRPPRC	99	40.058	ENSGACG00000010679	lrpprc	99	40.248	Gasterosteus_aculeatus
ENSCAPG00000013631	LRPPRC	97	42.160	ENSHBUG00000000393	lrpprc	91	42.012	Haplochromis_burtoni
ENSCAPG00000013631	LRPPRC	100	66.029	ENSHGLG00000006123	LRPPRC	96	66.103	Heterocephalus_glaber_female
ENSCAPG00000013631	LRPPRC	63	68.402	ENSHGLG00100005960	-	97	68.523	Heterocephalus_glaber_male
ENSCAPG00000013631	LRPPRC	97	40.150	ENSHCOG00000002107	lrpprc	95	40.150	Hippocampus_comes
ENSCAPG00000013631	LRPPRC	99	41.540	ENSIPUG00000009406	lrpprc	94	41.540	Ictalurus_punctatus
ENSCAPG00000013631	LRPPRC	100	75.781	ENSSTOG00000011185	LRPPRC	92	75.781	Ictidomys_tridecemlineatus
ENSCAPG00000013631	LRPPRC	100	62.206	ENSJJAG00000020475	Lrpprc	97	62.206	Jaculus_jaculus
ENSCAPG00000013631	LRPPRC	99	37.042	ENSKMAG00000003287	lrpprc	81	37.042	Kryptolebias_marmoratus
ENSCAPG00000013631	LRPPRC	99	40.091	ENSLBEG00000023225	lrpprc	87	49.667	Labrus_bergylta
ENSCAPG00000013631	LRPPRC	99	47.067	ENSLACG00000014030	LRPPRC	95	47.067	Latimeria_chalumnae
ENSCAPG00000013631	LRPPRC	97	50.052	ENSLOCG00000016390	lrpprc	88	50.052	Lepisosteus_oculatus
ENSCAPG00000013631	LRPPRC	99	54.261	ENSLAFG00000008614	LRPPRC	96	58.327	Loxodonta_africana
ENSCAPG00000013631	LRPPRC	99	61.217	ENSMFAG00000041560	LRPPRC	100	82.266	Macaca_fascicularis
ENSCAPG00000013631	LRPPRC	99	60.044	ENSMMUG00000019841	LRPPRC	100	81.773	Macaca_mulatta
ENSCAPG00000013631	LRPPRC	99	63.105	ENSMNEG00000031613	LRPPRC	96	61.510	Macaca_nemestrina
ENSCAPG00000013631	LRPPRC	98	42.250	ENSMAMG00000021835	lrpprc	95	42.702	Mastacembelus_armatus
ENSCAPG00000013631	LRPPRC	97	42.433	ENSMZEG00005027379	lrpprc	93	42.285	Maylandia_zebra
ENSCAPG00000013631	LRPPRC	100	60.838	ENSMAUG00000012118	Lrpprc	99	61.326	Mesocricetus_auratus
ENSCAPG00000013631	LRPPRC	99	62.767	ENSMICG00000010486	LRPPRC	96	62.767	Microcebus_murinus
ENSCAPG00000013631	LRPPRC	100	62.407	ENSMOCG00000006048	Lrpprc	96	62.407	Microtus_ochrogaster
ENSCAPG00000013631	LRPPRC	99	44.374	ENSMMOG00000007830	lrpprc	94	44.374	Mola_mola
ENSCAPG00000013631	LRPPRC	99	50.867	ENSMODG00000000648	LRPPRC	99	53.577	Monodelphis_domestica
ENSCAPG00000013631	LRPPRC	97	40.553	ENSMALG00000001271	lrpprc	93	40.553	Monopterus_albus
ENSCAPG00000013631	LRPPRC	99	61.527	ENSMPUG00000011800	LRPPRC	96	63.062	Mustela_putorius_furo
ENSCAPG00000013631	LRPPRC	99	62.059	ENSMLUG00000010575	LRPPRC	96	62.059	Myotis_lucifugus
ENSCAPG00000013631	LRPPRC	99	62.675	ENSNGAG00000013069	Lrpprc	96	62.675	Nannospalax_galili
ENSCAPG00000013631	LRPPRC	97	43.165	ENSNBRG00000013202	lrpprc	99	43.165	Neolamprologus_brichardi
ENSCAPG00000013631	LRPPRC	99	60.682	ENSNLEG00000016782	LRPPRC	96	60.682	Nomascus_leucogenys
ENSCAPG00000013631	LRPPRC	91	61.667	ENSOPRG00000016774	LRPPRC	89	61.667	Ochotona_princeps
ENSCAPG00000013631	LRPPRC	100	67.500	ENSODEG00000011211	LRPPRC	96	67.500	Octodon_degus
ENSCAPG00000013631	LRPPRC	99	41.606	ENSONIG00000000917	lrpprc	95	39.809	Oreochromis_niloticus
ENSCAPG00000013631	LRPPRC	53	52.361	ENSOANG00000014670	-	89	52.074	Ornithorhynchus_anatinus
ENSCAPG00000013631	LRPPRC	99	63.208	ENSOCUG00000015046	LRPPRC	92	63.208	Oryctolagus_cuniculus
ENSCAPG00000013631	LRPPRC	99	43.069	ENSORLG00000004605	lrpprc	99	43.069	Oryzias_latipes
ENSCAPG00000013631	LRPPRC	94	41.686	ENSORLG00020012536	lrpprc	99	40.551	Oryzias_latipes_hni
ENSCAPG00000013631	LRPPRC	98	42.668	ENSORLG00015018270	lrpprc	96	42.668	Oryzias_latipes_hsok
ENSCAPG00000013631	LRPPRC	99	60.985	ENSOGAG00000012798	LRPPRC	96	60.985	Otolemur_garnettii
ENSCAPG00000013631	LRPPRC	99	62.335	ENSOARG00000006522	LRPPRC	96	62.335	Ovis_aries
ENSCAPG00000013631	LRPPRC	99	59.971	ENSPPAG00000040876	LRPPRC	96	59.971	Pan_paniscus
ENSCAPG00000013631	LRPPRC	99	63.162	ENSPPRG00000006578	LRPPRC	96	63.162	Panthera_pardus
ENSCAPG00000013631	LRPPRC	99	63.235	ENSPTIG00000000933	LRPPRC	96	63.235	Panthera_tigris_altaica
ENSCAPG00000013631	LRPPRC	99	61.425	ENSPTRG00000011880	LRPPRC	96	61.425	Pan_troglodytes
ENSCAPG00000013631	LRPPRC	99	61.290	ENSPANG00000020731	LRPPRC	90	64.033	Papio_anubis
ENSCAPG00000013631	LRPPRC	99	40.249	ENSPKIG00000022232	lrpprc	92	47.982	Paramormyrops_kingsleyae
ENSCAPG00000013631	LRPPRC	63	50.971	ENSPSIG00000006830	-	93	50.971	Pelodiscus_sinensis
ENSCAPG00000013631	LRPPRC	69	38.300	ENSPMGG00000016597	lrpprc	96	38.300	Periophthalmus_magnuspinnatus
ENSCAPG00000013631	LRPPRC	96	37.029	ENSPMAG00000002147	lrpprc	99	37.029	Petromyzon_marinus
ENSCAPG00000013631	LRPPRC	99	41.703	ENSPFOG00000011227	lrpprc	97	41.673	Poecilia_formosa
ENSCAPG00000013631	LRPPRC	99	41.483	ENSPLAG00000004018	lrpprc	95	41.483	Poecilia_latipinna
ENSCAPG00000013631	LRPPRC	99	41.630	ENSPMEG00000016425	lrpprc	95	41.630	Poecilia_mexicana
ENSCAPG00000013631	LRPPRC	97	41.493	ENSPREG00000003662	lrpprc	94	41.493	Poecilia_reticulata
ENSCAPG00000013631	LRPPRC	61	64.303	ENSPPYG00000029532	-	99	64.303	Pongo_abelii
ENSCAPG00000013631	LRPPRC	77	85.714	ENSPCAG00000001430	LRPPRC	68	85.714	Procavia_capensis
ENSCAPG00000013631	LRPPRC	99	60.599	ENSPVAG00000002007	LRPPRC	96	60.599	Pteropus_vampyrus
ENSCAPG00000013631	LRPPRC	98	42.053	ENSPNYG00000000756	lrpprc	95	42.053	Pundamilia_nyererei
ENSCAPG00000013631	LRPPRC	99	42.269	ENSPNAG00000002895	lrpprc	95	42.082	Pygocentrus_nattereri
ENSCAPG00000013631	LRPPRC	100	60.838	ENSRNOG00000005877	Lrpprc	96	60.838	Rattus_norvegicus
ENSCAPG00000013631	LRPPRC	99	63.306	ENSRBIG00000031552	LRPPRC	96	58.781	Rhinopithecus_bieti
ENSCAPG00000013631	LRPPRC	99	61.013	ENSSBOG00000011807	LRPPRC	96	61.013	Saimiri_boliviensis_boliviensis
ENSCAPG00000013631	LRPPRC	99	51.947	ENSSHAG00000018725	LRPPRC	99	51.947	Sarcophilus_harrisii
ENSCAPG00000013631	LRPPRC	97	40.177	ENSSFOG00015001042	lrpprc	93	40.177	Scleropages_formosus
ENSCAPG00000013631	LRPPRC	99	41.917	ENSSDUG00000019062	lrpprc	94	41.917	Seriola_dumerili
ENSCAPG00000013631	LRPPRC	99	41.418	ENSSLDG00000023028	lrpprc	96	41.660	Seriola_lalandi_dorsalis
ENSCAPG00000013631	LRPPRC	89	56.496	ENSSARG00000000426	LRPPRC	100	56.496	Sorex_araneus
ENSCAPG00000013631	LRPPRC	97	42.300	ENSSPAG00000000162	lrpprc	91	42.300	Stegastes_partitus
ENSCAPG00000013631	LRPPRC	99	61.976	ENSSSCG00000008452	LRPPRC	96	61.976	Sus_scrofa
ENSCAPG00000013631	LRPPRC	97	43.442	ENSTGUG00000003759	LRPPRC	100	43.442	Taeniopygia_guttata
ENSCAPG00000013631	LRPPRC	89	41.023	ENSTRUG00000008409	lrpprc	88	41.023	Takifugu_rubripes
ENSCAPG00000013631	LRPPRC	98	41.336	ENSTNIG00000007470	lrpprc	99	41.336	Tetraodon_nigroviridis
ENSCAPG00000013631	LRPPRC	99	60.118	ENSTTRG00000006403	LRPPRC	96	60.118	Tursiops_truncatus
ENSCAPG00000013631	LRPPRC	98	63.455	ENSVPAG00000008993	LRPPRC	94	63.455	Vicugna_pacos
ENSCAPG00000013631	LRPPRC	99	47.399	ENSXETG00000009296	lrpprc	97	47.399	Xenopus_tropicalis
ENSCAPG00000013631	LRPPRC	98	41.501	ENSXCOG00000013343	lrpprc	95	40.555	Xiphophorus_couchianus
ENSCAPG00000013631	LRPPRC	97	41.580	ENSXMAG00000018108	lrpprc	94	41.580	Xiphophorus_maculatus