EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAPG00000013668 (Gene tree)
Gene ID
-
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Plus strand
Length
26956 bases
Position
chrAVPZ01000855.1:297842-324797
Accession
26721
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000012945PAT1PF09770.91.1e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000016703PATL1-2012334-ENSCAPP00000012945777 (aa)--
Gene Model
Click here to download ENSCAPG00000013668's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013668's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000013668PATL16234.356ENSG00000229474PATL29936.813Homo_sapiens
ENSCAPG00000013668PATL19990.674ENSG00000166889PATL110090.674Homo_sapiens
ENSCAPG00000013668PATL18631.758ENSAPOG00000022988patl27332.657Acanthochromis_polyacanthus
ENSCAPG00000013668PATL18551.799ENSAPOG00000021290patl19945.612Acanthochromis_polyacanthus
ENSCAPG00000013668PATL19991.062ENSAMEG00000014215PATL110090.544Ailuropoda_melanoleuca
ENSCAPG00000013668PATL16633.652ENSAMEG00000014997PATL27635.071Ailuropoda_melanoleuca
ENSCAPG00000013668PATL19944.294ENSACIG00000005182patl19945.668Amphilophus_citrinellus
ENSCAPG00000013668PATL15352.163ENSAOCG00000021993patl19545.570Amphiprion_ocellaris
ENSCAPG00000013668PATL16166.667ENSAPEG00000021391patl17968.333Amphiprion_percula
ENSCAPG00000013668PATL16833.081ENSAPEG00000011299patl27532.325Amphiprion_percula
ENSCAPG00000013668PATL18881.818ENSATEG00000002230patl18352.809Anabas_testudineus
ENSCAPG00000013668PATL16334.195ENSATEG00000019567patl26135.648Anabas_testudineus
ENSCAPG00000013668PATL17170.344ENSAPLG00000013394PATL19970.545Anas_platyrhynchos
ENSCAPG00000013668PATL15339.225ENSAPLG00000003980PATL26438.741Anas_platyrhynchos
ENSCAPG00000013668PATL19978.036ENSACAG00000006607PATL110077.519Anolis_carolinensis
ENSCAPG00000013668PATL19991.192ENSANAG00000023078PATL110091.192Aotus_nancymaae
ENSCAPG00000013668PATL16168.333ENSACLG00000005144patl18450.485Astatotilapia_calliptera
ENSCAPG00000013668PATL15936.575ENSACLG00000010326patl25436.993Astatotilapia_calliptera
ENSCAPG00000013668PATL19132.316ENSAMXG00000020293patl25738.278Astyanax_mexicanus
ENSCAPG00000013668PATL15451.675ENSAMXG00000010731patl19947.037Astyanax_mexicanus
ENSCAPG00000013668PATL19991.051ENSBTAG00000005913PATL110090.933Bos_taurus
ENSCAPG00000013668PATL19991.192ENSCJAG00000016192PATL110091.062Callithrix_jacchus
ENSCAPG00000013668PATL15735.556ENSCJAG00000002379PATL27335.952Callithrix_jacchus
ENSCAPG00000013668PATL16634.429ENSCAFG00000013629PATL27435.697Canis_familiaris
ENSCAPG00000013668PATL19990.933ENSCAFG00000007581PATL110090.415Canis_familiaris
ENSCAPG00000013668PATL19991.123ENSCAFG00020001648PATL110090.339Canis_lupus_dingo
ENSCAPG00000013668PATL16634.429ENSCAFG00020022169PATL27435.697Canis_lupus_dingo
ENSCAPG00000013668PATL16235.628ENSCHIG00000026665PATL27437.767Capra_hircus
ENSCAPG00000013668PATL19989.896ENSCHIG00000025913PATL110089.896Capra_hircus
ENSCAPG00000013668PATL19990.897ENSTSYG00000012748PATL19690.767Carlito_syrichta
ENSCAPG00000013668PATL19996.962ENSCPOG00000006827PATL110096.962Cavia_porcellus
ENSCAPG00000013668PATL19991.451ENSCCAG00000023759PATL110091.451Cebus_capucinus
ENSCAPG00000013668PATL19991.321ENSCATG00000009629PATL110091.321Cercocebus_atys
ENSCAPG00000013668PATL15734.899ENSCLAG00000014407PATL27335.806Chinchilla_lanigera
ENSCAPG00000013668PATL19993.611ENSCLAG00000003427PATL110093.481Chinchilla_lanigera
ENSCAPG00000013668PATL19091.822ENSCSAG00000006095PATL110091.822Chlorocebus_sabaeus
ENSCAPG00000013668PATL16792.723ENSCHOG00000001611PATL18392.723Choloepus_hoffmanni
ENSCAPG00000013668PATL15339.277ENSCPBG00000006150PATL26038.702Chrysemys_picta_bellii
ENSCAPG00000013668PATL16234.969ENSCANG00000013856PATL27436.620Colobus_angolensis_palliatus
ENSCAPG00000013668PATL19991.310ENSCANG00000039197PATL19992.000Colobus_angolensis_palliatus
ENSCAPG00000013668PATL19990.544ENSCGRG00001024927Patl110090.544Cricetulus_griseus_chok1gshd
ENSCAPG00000013668PATL19991.004ENSCGRG00000000461Patl110091.004Cricetulus_griseus_crigri
ENSCAPG00000013668PATL19166.667ENSCSEG00000008261patl18256.977Cynoglossus_semilaevis
ENSCAPG00000013668PATL18730.511ENSCSEG00000009438patl25835.529Cynoglossus_semilaevis
ENSCAPG00000013668PATL18851.435ENSCVAG00000006664patl110045.970Cyprinodon_variegatus
ENSCAPG00000013668PATL15431.667ENSCVAG00000016203patl26130.952Cyprinodon_variegatus
ENSCAPG00000013668PATL18632.599ENSDARG00000089567patl27035.027Danio_rerio
ENSCAPG00000013668PATL19946.467ENSDARG00000017423patl110046.154Danio_rerio
ENSCAPG00000013668PATL19985.584ENSDNOG00000038865PATL19889.338Dasypus_novemcinctus
ENSCAPG00000013668PATL19990.415ENSDORG00000000237Patl110090.415Dipodomys_ordii
ENSCAPG00000013668PATL15036.667ENSDORG00000026649Patl27235.641Dipodomys_ordii
ENSCAPG00000013668PATL19990.944ENSEASG00005007963PATL110090.944Equus_asinus_asinus
ENSCAPG00000013668PATL19990.815ENSECAG00000011411PATL110090.815Equus_caballus
ENSCAPG00000013668PATL16733.837ENSELUG00000023244patl25536.019Esox_lucius
ENSCAPG00000013668PATL18580.645ENSELUG00000024249patl19845.390Esox_lucius
ENSCAPG00000013668PATL16234.016ENSFCAG00000027170PATL27434.752Felis_catus
ENSCAPG00000013668PATL19990.933ENSFCAG00000015573PATL110090.415Felis_catus
ENSCAPG00000013668PATL19631.619ENSFALG00000009768PATL29831.673Ficedula_albicollis
ENSCAPG00000013668PATL19979.974ENSFALG00000012150PATL19978.776Ficedula_albicollis
ENSCAPG00000013668PATL15134.165ENSFDAG00000012242PATL27335.516Fukomys_damarensis
ENSCAPG00000013668PATL19990.352ENSFDAG00000016128PATL110090.352Fukomys_damarensis
ENSCAPG00000013668PATL16168.333ENSFHEG00000017790patl18362.500Fundulus_heteroclitus
ENSCAPG00000013668PATL15632.962ENSGMOG00000005666patl29933.654Gadus_morhua
ENSCAPG00000013668PATL19976.662ENSGALG00000042641PATL110076.271Gallus_gallus
ENSCAPG00000013668PATL15339.423ENSGALG00000002167PATL27138.849Gallus_gallus
ENSCAPG00000013668PATL16360.274ENSGAFG00000006508patl18460.274Gambusia_affinis
ENSCAPG00000013668PATL18632.101ENSGAFG00000019344patl25637.381Gambusia_affinis
ENSCAPG00000013668PATL19947.821ENSGACG00000016448patl19948.917Gasterosteus_aculeatus
ENSCAPG00000013668PATL19982.147ENSGAGG00000004461PATL110082.808Gopherus_agassizii
ENSCAPG00000013668PATL19990.674ENSGGOG00000004335PATL110090.674Gorilla_gorilla
ENSCAPG00000013668PATL16234.560ENSGGOG00000025923PATL27436.150Gorilla_gorilla
ENSCAPG00000013668PATL16235.052ENSHBUG00000005929patl26136.730Haplochromis_burtoni
ENSCAPG00000013668PATL16168.333ENSHBUG00000005365patl18450.485Haplochromis_burtoni
ENSCAPG00000013668PATL19990.155ENSHGLG00000018173PATL110090.026Heterocephalus_glaber_female
ENSCAPG00000013668PATL19989.309ENSHGLG00100003453PATL110089.179Heterocephalus_glaber_male
ENSCAPG00000013668PATL19730.440ENSHCOG00000016754patl29330.233Hippocampus_comes
ENSCAPG00000013668PATL19455.696ENSHCOG00000001898patl18258.025Hippocampus_comes
ENSCAPG00000013668PATL16733.396ENSIPUG00000020692patl25735.545Ictalurus_punctatus
ENSCAPG00000013668PATL16634.483ENSSTOG00000033848PATL27236.386Ictidomys_tridecemlineatus
ENSCAPG00000013668PATL19891.316ENSSTOG00000013764PATL19991.316Ictidomys_tridecemlineatus
ENSCAPG00000013668PATL19990.601ENSJJAG00000010135Patl110090.601Jaculus_jaculus
ENSCAPG00000013668PATL16261.667ENSKMAG00000020848patl19749.247Kryptolebias_marmoratus
ENSCAPG00000013668PATL16832.558ENSKMAG00000021275patl25434.679Kryptolebias_marmoratus
ENSCAPG00000013668PATL19071.154ENSLBEG00000023617patl18158.537Labrus_bergylta
ENSCAPG00000013668PATL18731.511ENSLBEG00000022344patl25536.175Labrus_bergylta
ENSCAPG00000013668PATL19856.527ENSLACG00000004640PATL19955.974Latimeria_chalumnae
ENSCAPG00000013668PATL19946.498ENSLOCG00000000717patl19947.052Lepisosteus_oculatus
ENSCAPG00000013668PATL19990.803ENSLAFG00000015161PATL110090.803Loxodonta_africana
ENSCAPG00000013668PATL15137.000ENSLAFG00000031124PATL27336.250Loxodonta_africana
ENSCAPG00000013668PATL19991.321ENSMFAG00000040851PATL110091.321Macaca_fascicularis
ENSCAPG00000013668PATL19991.321ENSMMUG00000017287PATL110091.321Macaca_mulatta
ENSCAPG00000013668PATL19991.321ENSMNEG00000038692PATL110091.321Macaca_nemestrina
ENSCAPG00000013668PATL19991.192ENSMLEG00000030044PATL110091.192Mandrillus_leucophaeus
ENSCAPG00000013668PATL16034.105ENSMAMG00000013327patl26035.337Mastacembelus_armatus
ENSCAPG00000013668PATL18780.645ENSMAMG00000003950patl19946.822Mastacembelus_armatus
ENSCAPG00000013668PATL16168.333ENSMZEG00005013404patl18450.485Maylandia_zebra
ENSCAPG00000013668PATL15936.575ENSMZEG00005014292patl25436.993Maylandia_zebra
ENSCAPG00000013668PATL19276.999ENSMGAG00000003406PATL19976.011Meleagris_gallopavo
ENSCAPG00000013668PATL18592.025ENSMAUG00000012059Patl19692.025Mesocricetus_auratus
ENSCAPG00000013668PATL19986.996ENSMICG00000004172PATL19892.114Microcebus_murinus
ENSCAPG00000013668PATL19990.674ENSMOCG00000010087Patl110090.674Microtus_ochrogaster
ENSCAPG00000013668PATL15734.157ENSMOCG00000015367Patl27234.663Microtus_ochrogaster
ENSCAPG00000013668PATL19945.396ENSMMOG00000013711patl110045.925Mola_mola
ENSCAPG00000013668PATL15432.057ENSMMOG00000001299patl26031.340Mola_mola
ENSCAPG00000013668PATL19984.974ENSMODG00000020201PATL110084.197Monodelphis_domestica
ENSCAPG00000013668PATL16634.682ENSMODG00000017690PATL27136.385Monodelphis_domestica
ENSCAPG00000013668PATL16433.008ENSMALG00000008131patl25334.507Monopterus_albus
ENSCAPG00000013668PATL17654.155ENSMALG00000018706patl19754.155Monopterus_albus
ENSCAPG00000013668PATL19990.285MGP_CAROLIEiJ_G0022739Patl110090.285Mus_caroli
ENSCAPG00000013668PATL19990.415ENSMUSG00000046139Patl110090.415Mus_musculus
ENSCAPG00000013668PATL19990.674MGP_PahariEiJ_G0014233Patl110090.674Mus_pahari
ENSCAPG00000013668PATL19990.544MGP_SPRETEiJ_G0023652Patl110090.544Mus_spretus
ENSCAPG00000013668PATL19990.933ENSMPUG00000014607PATL110090.415Mustela_putorius_furo
ENSCAPG00000013668PATL19988.342ENSMLUG00000011169PATL110087.824Myotis_lucifugus
ENSCAPG00000013668PATL19989.820ENSNGAG00000003682Patl110089.691Nannospalax_galili
ENSCAPG00000013668PATL16234.639ENSNBRG00000011745patl25836.493Neolamprologus_brichardi
ENSCAPG00000013668PATL19987.990ENSNLEG00000013081PATL110087.990Nomascus_leucogenys
ENSCAPG00000013668PATL16234.765ENSNLEG00000005673PATL27536.150Nomascus_leucogenys
ENSCAPG00000013668PATL16388.095ENSMEUG00000009391PATL17588.095Notamacropus_eugenii
ENSCAPG00000013668PATL16792.000ENSOPRG00000007963PATL17992.000Ochotona_princeps
ENSCAPG00000013668PATL17394.024ENSODEG00000001792PATL19594.024Octodon_degus
ENSCAPG00000013668PATL16168.333ENSONIG00000004170patl110047.742Oreochromis_niloticus
ENSCAPG00000013668PATL16235.597ENSONIG00000011519patl25437.143Oreochromis_niloticus
ENSCAPG00000013668PATL15185.390ENSOANG00000011117-9685.714Ornithorhynchus_anatinus
ENSCAPG00000013668PATL15037.065ENSOANG00000001538-8437.221Ornithorhynchus_anatinus
ENSCAPG00000013668PATL16133.544ENSOCUG00000006339PATL27534.815Oryctolagus_cuniculus
ENSCAPG00000013668PATL19991.192ENSOCUG00000002156PATL110091.192Oryctolagus_cuniculus
ENSCAPG00000013668PATL16433.202ENSORLG00000005780patl25635.402Oryzias_latipes
ENSCAPG00000013668PATL16433.794ENSORLG00020016506patl26133.202Oryzias_latipes_hni
ENSCAPG00000013668PATL16433.399ENSORLG00015014500patl26333.136Oryzias_latipes_hsok
ENSCAPG00000013668PATL18732.374ENSOMEG00000021628patl29430.087Oryzias_melastigma
ENSCAPG00000013668PATL19991.192ENSOGAG00000004351PATL110091.192Otolemur_garnettii
ENSCAPG00000013668PATL15634.921ENSOGAG00000004709PATL27235.613Otolemur_garnettii
ENSCAPG00000013668PATL16435.560ENSOARG00000003762PATL27237.284Ovis_aries
ENSCAPG00000013668PATL19990.743ENSOARG00000012005PATL19690.743Ovis_aries
ENSCAPG00000013668PATL19990.803ENSPPAG00000034275PATL110090.803Pan_paniscus
ENSCAPG00000013668PATL16234.490ENSPPAG00000007221PATL27336.150Pan_paniscus
ENSCAPG00000013668PATL19991.525ENSPPRG00000020639PATL110091.004Panthera_pardus
ENSCAPG00000013668PATL16233.811ENSPPRG00000004279PATL27434.515Panthera_pardus
ENSCAPG00000013668PATL19991.062ENSPTIG00000019298PATL110090.544Panthera_tigris_altaica
ENSCAPG00000013668PATL16233.607ENSPTIG00000018964PATL27434.279Panthera_tigris_altaica
ENSCAPG00000013668PATL16234.151ENSPTRG00000041536PATL27335.915Pan_troglodytes
ENSCAPG00000013668PATL19983.420ENSPTRG00000003697PATL110083.420Pan_troglodytes
ENSCAPG00000013668PATL19991.321ENSPANG00000035620PATL110091.321Papio_anubis
ENSCAPG00000013668PATL15335.915ENSPKIG00000016887patl25535.915Paramormyrops_kingsleyae
ENSCAPG00000013668PATL19945.655ENSPKIG00000016224patl19947.124Paramormyrops_kingsleyae
ENSCAPG00000013668PATL19981.525ENSPSIG00000016206PATL19681.525Pelodiscus_sinensis
ENSCAPG00000013668PATL15337.232ENSPSIG00000017690PATL29636.320Pelodiscus_sinensis
ENSCAPG00000013668PATL18853.237ENSPMGG00000002644patl19945.773Periophthalmus_magnuspinnatus
ENSCAPG00000013668PATL16035.294ENSPMGG00000014550patl26336.085Periophthalmus_magnuspinnatus
ENSCAPG00000013668PATL16233.947ENSPEMG00000016509Patl27034.783Peromyscus_maniculatus_bairdii
ENSCAPG00000013668PATL19991.123ENSPEMG00000014215Patl110090.933Peromyscus_maniculatus_bairdii
ENSCAPG00000013668PATL19986.287ENSPCIG00000010852PATL110085.511Phascolarctos_cinereus
ENSCAPG00000013668PATL15735.477ENSPCIG00000018256PATL27636.634Phascolarctos_cinereus
ENSCAPG00000013668PATL18368.333ENSPFOG00000007768patl110046.209Poecilia_formosa
ENSCAPG00000013668PATL19731.209ENSPFOG00000007305patl25537.055Poecilia_formosa
ENSCAPG00000013668PATL19731.201ENSPLAG00000020713patl25537.055Poecilia_latipinna
ENSCAPG00000013668PATL18952.133ENSPLAG00000018465patl19749.547Poecilia_latipinna
ENSCAPG00000013668PATL19947.748ENSPMEG00000006555patl19749.249Poecilia_mexicana
ENSCAPG00000013668PATL19731.688ENSPMEG00000018942patl25537.055Poecilia_mexicana
ENSCAPG00000013668PATL17348.276ENSPREG00000003874patl17049.310Poecilia_reticulata
ENSCAPG00000013668PATL19991.192ENSPPYG00000003230PATL110091.192Pongo_abelii
ENSCAPG00000013668PATL15336.957ENSPCOG00000000295PATL29937.912Propithecus_coquereli
ENSCAPG00000013668PATL19990.544ENSPCOG00000020770PATL110090.544Propithecus_coquereli
ENSCAPG00000013668PATL18586.910ENSPVAG00000015239PATL110086.149Pteropus_vampyrus
ENSCAPG00000013668PATL15835.886ENSPNYG00000017381patl26136.516Pundamilia_nyererei
ENSCAPG00000013668PATL16968.333ENSPNYG00000018936patl19750.450Pundamilia_nyererei
ENSCAPG00000013668PATL19944.498ENSPNAG00000017907patl19946.172Pygocentrus_nattereri
ENSCAPG00000013668PATL16135.699ENSPNAG00000002315patl25737.324Pygocentrus_nattereri
ENSCAPG00000013668PATL19989.896ENSRNOG00000021052Patl110089.896Rattus_norvegicus
ENSCAPG00000013668PATL19981.165ENSRBIG00000032263PATL110081.165Rhinopithecus_bieti
ENSCAPG00000013668PATL19991.192ENSRROG00000032861PATL110091.192Rhinopithecus_roxellana
ENSCAPG00000013668PATL19991.192ENSSBOG00000025195PATL110091.192Saimiri_boliviensis_boliviensis
ENSCAPG00000013668PATL19985.935ENSSHAG00000004309PATL110085.161Sarcophilus_harrisii
ENSCAPG00000013668PATL19942.321ENSSFOG00015009614patl19945.998Scleropages_formosus
ENSCAPG00000013668PATL18631.700ENSSFOG00015000720patl25537.028Scleropages_formosus
ENSCAPG00000013668PATL16434.394ENSSMAG00000017262patl26335.731Scophthalmus_maximus
ENSCAPG00000013668PATL19163.934ENSSMAG00000009482patl18155.556Scophthalmus_maximus
ENSCAPG00000013668PATL19170.000ENSSDUG00000005362patl17663.889Seriola_dumerili
ENSCAPG00000013668PATL18732.253ENSSDUG00000022927patl26034.021Seriola_dumerili
ENSCAPG00000013668PATL16733.769ENSSLDG00000017922patl27233.333Seriola_lalandi_dorsalis
ENSCAPG00000013668PATL19168.333ENSSLDG00000019146patl17662.500Seriola_lalandi_dorsalis
ENSCAPG00000013668PATL15435.780ENSSARG00000009047PATL28035.181Sorex_araneus
ENSCAPG00000013668PATL17995.238ENSSARG00000009600PATL18095.238Sorex_araneus
ENSCAPG00000013668PATL19979.819ENSSPUG00000009453PATL110079.301Sphenodon_punctatus
ENSCAPG00000013668PATL15451.559ENSSPAG00000003187patl19946.230Stegastes_partitus
ENSCAPG00000013668PATL15834.879ENSSPAG00000004784patl26135.337Stegastes_partitus
ENSCAPG00000013668PATL19991.667ENSSSCG00000013124PATL110091.321Sus_scrofa
ENSCAPG00000013668PATL15136.476ENSTGUG00000004619-9837.037Taeniopygia_guttata
ENSCAPG00000013668PATL19979.534ENSTGUG00000006222PATL110078.340Taeniopygia_guttata
ENSCAPG00000013668PATL19355.696ENSTRUG00000000709patl19944.010Takifugu_rubripes
ENSCAPG00000013668PATL16134.375ENSTRUG00000005647patl25835.566Takifugu_rubripes
ENSCAPG00000013668PATL18989.791ENSTBEG00000000796PATL19089.791Tupaia_belangeri
ENSCAPG00000013668PATL17191.919ENSTTRG00000009389PATL18491.837Tursiops_truncatus
ENSCAPG00000013668PATL16633.333ENSUAMG00000018533PATL27334.988Ursus_americanus
ENSCAPG00000013668PATL19891.459ENSUMAG00000018634PATL110090.818Ursus_maritimus
ENSCAPG00000013668PATL16633.398ENSUMAG00000007738PATL27335.225Ursus_maritimus
ENSCAPG00000013668PATL16195.918ENSVPAG00000009224PATL17396.000Vicugna_pacos
ENSCAPG00000013668PATL19991.276ENSVVUG00000016668PATL110090.818Vulpes_vulpes
ENSCAPG00000013668PATL16634.623ENSVVUG00000011576PATL27435.934Vulpes_vulpes
ENSCAPG00000013668PATL15337.198ENSXETG00000014167patl27933.716Xenopus_tropicalis
ENSCAPG00000013668PATL16066.667ENSXCOG00000010808patl19866.667Xiphophorus_couchianus
ENSCAPG00000013668PATL16266.667ENSXMAG00000013834patl18460.000Xiphophorus_maculatus

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