EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013803 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 63231 bases
Position: chrAVPZ01000178.1:17996692-18059922
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000013140	RRM_1	PF00076.22	7.3e-34	1	3
ENSCAPP00000013140	RRM_1	PF00076.22	7.3e-34	2	3
ENSCAPP00000013140	RRM_1	PF00076.22	7.3e-34	3	3
ENSCAPP00000013155	RRM_1	PF00076.22	1.1e-33	1	3
ENSCAPP00000013155	RRM_1	PF00076.22	1.1e-33	2	3
ENSCAPP00000013155	RRM_1	PF00076.22	1.1e-33	3	3
ENSCAPP00000013150	RRM_1	PF00076.22	1.1e-33	1	3
ENSCAPP00000013150	RRM_1	PF00076.22	1.1e-33	2	3
ENSCAPP00000013150	RRM_1	PF00076.22	1.1e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000016900	SPEN-201	10524	-	ENSCAPP00000013140	3507 (aa)	-	-
ENSCAPT00000016915	SPEN-203	10362	-	ENSCAPP00000013155	3453 (aa)	-	-
ENSCAPT00000016910	SPEN-202	10401	-	ENSCAPP00000013150	3466 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013803	SPEN	100	81.846	ENSG00000065526	SPEN	99	97.980	Homo_sapiens
ENSCAPG00000013803	SPEN	93	81.421	ENSAPOG00000009853	-	81	72.917	Acanthochromis_polyacanthus
ENSCAPG00000013803	SPEN	84	83.432	ENSAPOG00000011411	si:ch1073-335m2.2	89	73.077	Acanthochromis_polyacanthus
ENSCAPG00000013803	SPEN	100	80.027	ENSAMEG00000011817	SPEN	99	83.286	Ailuropoda_melanoleuca
ENSCAPG00000013803	SPEN	76	78.195	ENSAOCG00000008077	si:ch1073-335m2.2	82	78.195	Amphiprion_ocellaris
ENSCAPG00000013803	SPEN	93	81.421	ENSAOCG00000014505	-	97	45.066	Amphiprion_ocellaris
ENSCAPG00000013803	SPEN	85	83.432	ENSAPEG00000013515	si:ch1073-335m2.2	88	83.432	Amphiprion_percula
ENSCAPG00000013803	SPEN	96	81.421	ENSAPEG00000010288	-	97	45.135	Amphiprion_percula
ENSCAPG00000013803	SPEN	97	79.470	ENSATEG00000005627	-	89	47.819	Anabas_testudineus
ENSCAPG00000013803	SPEN	92	79.781	ENSATEG00000007674	si:ch1073-335m2.2	70	79.781	Anabas_testudineus
ENSCAPG00000013803	SPEN	100	66.968	ENSAPLG00000012618	SPEN	100	66.575	Anas_platyrhynchos
ENSCAPG00000013803	SPEN	100	59.035	ENSACAG00000013761	SPEN	100	59.679	Anolis_carolinensis
ENSCAPG00000013803	SPEN	100	81.402	ENSANAG00000034428	SPEN	99	81.156	Aotus_nancymaae
ENSCAPG00000013803	SPEN	73	76.020	ENSACLG00000021433	si:ch1073-335m2.2	77	76.020	Astatotilapia_calliptera
ENSCAPG00000013803	SPEN	97	45.438	ENSACLG00000016922	-	94	74.163	Astatotilapia_calliptera
ENSCAPG00000013803	SPEN	90	80.132	ENSAMXG00000012485	spen	97	47.162	Astyanax_mexicanus
ENSCAPG00000013803	SPEN	100	81.325	ENSBTAG00000018729	SPEN	99	79.842	Bos_taurus
ENSCAPG00000013803	SPEN	100	80.961	ENSCJAG00000008527	SPEN	99	80.743	Callithrix_jacchus
ENSCAPG00000013803	SPEN	87	78.744	ENSCAFG00000016132	-	96	88.618	Canis_familiaris
ENSCAPG00000013803	SPEN	100	81.976	ENSCHIG00000025070	SPEN	99	80.794	Capra_hircus
ENSCAPG00000013803	SPEN	92	79.057	ENSTSYG00000036016	SPEN	99	79.669	Carlito_syrichta
ENSCAPG00000013803	SPEN	100	99.021	ENSCPOG00000014036	SPEN	100	99.021	Cavia_porcellus
ENSCAPG00000013803	SPEN	100	76.635	ENSCCAG00000020258	SPEN	99	77.928	Cebus_capucinus
ENSCAPG00000013803	SPEN	95	100.000	ENSCATG00000015079	SPEN	99	99.074	Cercocebus_atys
ENSCAPG00000013803	SPEN	99	88.194	ENSCLAG00000002018	SPEN	100	95.041	Chinchilla_lanigera
ENSCAPG00000013803	SPEN	100	81.644	ENSCSAG00000000841	SPEN	99	81.764	Chlorocebus_sabaeus
ENSCAPG00000013803	SPEN	100	67.571	ENSCPBG00000010477	SPEN	99	67.551	Chrysemys_picta_bellii
ENSCAPG00000013803	SPEN	100	80.762	ENSCANG00000034547	SPEN	99	80.408	Colobus_angolensis_palliatus
ENSCAPG00000013803	SPEN	99	78.109	ENSCGRG00001007725	Spen	99	78.081	Cricetulus_griseus_chok1gshd
ENSCAPG00000013803	SPEN	99	77.634	ENSCGRG00000010581	Spen	100	77.441	Cricetulus_griseus_crigri
ENSCAPG00000013803	SPEN	99	81.457	ENSCSEG00000003915	-	97	50.175	Cynoglossus_semilaevis
ENSCAPG00000013803	SPEN	100	42.771	ENSCVAG00000016346	-	93	47.037	Cyprinodon_variegatus
ENSCAPG00000013803	SPEN	69	61.172	ENSCVAG00000009075	si:ch1073-335m2.2	89	73.913	Cyprinodon_variegatus
ENSCAPG00000013803	SPEN	100	44.347	ENSDARG00000074245	spen	80	86.111	Danio_rerio
ENSCAPG00000013803	SPEN	75	61.446	ENSDARG00000074332	si:ch1073-335m2.2	77	70.335	Danio_rerio
ENSCAPG00000013803	SPEN	100	80.272	ENSDNOG00000041948	SPEN	99	80.223	Dasypus_novemcinctus
ENSCAPG00000013803	SPEN	99	76.934	ENSDORG00000023909	Spen	100	76.897	Dipodomys_ordii
ENSCAPG00000013803	SPEN	70	95.816	ENSETEG00000016692	-	67	95.816	Echinops_telfairi
ENSCAPG00000013803	SPEN	95	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSCAPG00000013803	SPEN	95	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSCAPG00000013803	SPEN	70	97.674	ENSEEUG00000010255	SPEN	75	97.674	Erinaceus_europaeus
ENSCAPG00000013803	SPEN	72	83.529	ENSELUG00000007726	si:ch1073-335m2.2	79	83.529	Esox_lucius
ENSCAPG00000013803	SPEN	89	62.672	ENSFALG00000003551	SPEN	100	63.019	Ficedula_albicollis
ENSCAPG00000013803	SPEN	99	84.568	ENSFDAG00000010212	SPEN	100	84.521	Fukomys_damarensis
ENSCAPG00000013803	SPEN	84	72.464	ENSFHEG00000004544	si:ch1073-335m2.2	57	72.947	Fundulus_heteroclitus
ENSCAPG00000013803	SPEN	92	80.226	ENSGMOG00000008156	si:ch1073-335m2.2	88	80.226	Gadus_morhua
ENSCAPG00000013803	SPEN	81	76.316	ENSGMOG00000008397	-	79	76.316	Gadus_morhua
ENSCAPG00000013803	SPEN	100	67.071	ENSGALG00000036932	SPEN	98	67.016	Gallus_gallus
ENSCAPG00000013803	SPEN	100	43.029	ENSGAFG00000015819	-	80	72.083	Gambusia_affinis
ENSCAPG00000013803	SPEN	84	83.951	ENSGACG00000001176	si:ch1073-335m2.2	86	81.437	Gasterosteus_aculeatus
ENSCAPG00000013803	SPEN	97	46.557	ENSGACG00000005341	-	91	48.282	Gasterosteus_aculeatus
ENSCAPG00000013803	SPEN	99	96.488	ENSGAGG00000020785	SPEN	99	67.687	Gopherus_agassizii
ENSCAPG00000013803	SPEN	100	81.544	ENSGGOG00000012041	SPEN	99	81.407	Gorilla_gorilla
ENSCAPG00000013803	SPEN	66	84.024	ENSHBUG00000023253	si:ch1073-335m2.2	82	84.024	Haplochromis_burtoni
ENSCAPG00000013803	SPEN	97	45.401	ENSHBUG00000020626	-	94	75.120	Haplochromis_burtoni
ENSCAPG00000013803	SPEN	100	82.061	ENSHGLG00000019259	SPEN	99	81.483	Heterocephalus_glaber_female
ENSCAPG00000013803	SPEN	89	87.719	ENSHGLG00100019294	SPEN	95	87.719	Heterocephalus_glaber_male
ENSCAPG00000013803	SPEN	89	81.746	ENSHCOG00000006004	si:ch1073-335m2.2	71	81.746	Hippocampus_comes
ENSCAPG00000013803	SPEN	81	66.986	ENSIPUG00000018212	si:ch1073-335m2.2	87	66.986	Ictalurus_punctatus
ENSCAPG00000013803	SPEN	99	79.739	ENSIPUG00000021668	spen	89	46.949	Ictalurus_punctatus
ENSCAPG00000013803	SPEN	99	81.188	ENSSTOG00000021428	SPEN	100	81.165	Ictidomys_tridecemlineatus
ENSCAPG00000013803	SPEN	100	79.824	ENSJJAG00000010882	Spen	99	79.884	Jaculus_jaculus
ENSCAPG00000013803	SPEN	97	44.227	ENSKMAG00000003882	-	72	54.311	Kryptolebias_marmoratus
ENSCAPG00000013803	SPEN	83	72.906	ENSKMAG00000021725	si:ch1073-335m2.2	53	72.906	Kryptolebias_marmoratus
ENSCAPG00000013803	SPEN	86	37.744	ENSLBEG00000019129	-	89	39.250	Labrus_bergylta
ENSCAPG00000013803	SPEN	92	76.796	ENSLBEG00000020855	si:ch1073-335m2.2	83	76.796	Labrus_bergylta
ENSCAPG00000013803	SPEN	95	95.652	ENSLACG00000003258	SPEN	97	95.652	Latimeria_chalumnae
ENSCAPG00000013803	SPEN	100	51.583	ENSLOCG00000007896	si:ch1073-335m2.2	98	53.638	Lepisosteus_oculatus
ENSCAPG00000013803	SPEN	100	79.086	ENSLAFG00000004524	SPEN	99	80.249	Loxodonta_africana
ENSCAPG00000013803	SPEN	100	81.480	ENSMFAG00000041974	SPEN	99	81.399	Macaca_fascicularis
ENSCAPG00000013803	SPEN	100	81.614	ENSMMUG00000008026	SPEN	99	81.467	Macaca_mulatta
ENSCAPG00000013803	SPEN	100	81.508	ENSMNEG00000042402	SPEN	99	81.769	Macaca_nemestrina
ENSCAPG00000013803	SPEN	100	81.836	ENSMLEG00000039293	SPEN	99	81.562	Mandrillus_leucophaeus
ENSCAPG00000013803	SPEN	93	69.406	ENSMAMG00000023870	si:ch1073-335m2.2	86	78.142	Mastacembelus_armatus
ENSCAPG00000013803	SPEN	77	76.020	ENSMZEG00005011762	si:ch1073-335m2.2	77	76.020	Maylandia_zebra
ENSCAPG00000013803	SPEN	89	42.719	ENSMZEG00005021491	-	93	74.163	Maylandia_zebra
ENSCAPG00000013803	SPEN	100	74.623	ENSMAUG00000008318	Spen	99	75.610	Mesocricetus_auratus
ENSCAPG00000013803	SPEN	100	81.803	ENSMICG00000030994	SPEN	99	81.833	Microcebus_murinus
ENSCAPG00000013803	SPEN	100	76.569	ENSMOCG00000016083	Spen	99	77.711	Microtus_ochrogaster
ENSCAPG00000013803	SPEN	100	66.639	ENSMODG00000003411	SPEN	99	66.199	Monodelphis_domestica
ENSCAPG00000013803	SPEN	97	78.808	ENSMALG00000008625	-	97	45.202	Monopterus_albus
ENSCAPG00000013803	SPEN	100	76.995	MGP_CAROLIEiJ_G0026745	Spen	99	77.093	Mus_caroli
ENSCAPG00000013803	SPEN	100	76.600	ENSMUSG00000040761	Spen	99	76.828	Mus_musculus
ENSCAPG00000013803	SPEN	100	76.016	MGP_PahariEiJ_G0029076	Spen	99	76.217	Mus_pahari
ENSCAPG00000013803	SPEN	100	76.750	MGP_SPRETEiJ_G0027724	Spen	99	76.951	Mus_spretus
ENSCAPG00000013803	SPEN	99	79.670	ENSMPUG00000016317	SPEN	100	82.402	Mustela_putorius_furo
ENSCAPG00000013803	SPEN	94	79.016	ENSMLUG00000010144	SPEN	98	94.837	Myotis_lucifugus
ENSCAPG00000013803	SPEN	99	82.710	ENSNGAG00000000641	Spen	99	86.138	Nannospalax_galili
ENSCAPG00000013803	SPEN	84	40.851	ENSNBRG00000022090	-	96	39.901	Neolamprologus_brichardi
ENSCAPG00000013803	SPEN	74	76.020	ENSNBRG00000005733	si:ch1073-335m2.2	84	76.020	Neolamprologus_brichardi
ENSCAPG00000013803	SPEN	100	81.480	ENSNLEG00000007652	SPEN	99	81.289	Nomascus_leucogenys
ENSCAPG00000013803	SPEN	91	92.708	ENSMEUG00000002422	SPEN	91	92.708	Notamacropus_eugenii
ENSCAPG00000013803	SPEN	93	85.505	ENSOPRG00000015800	SPEN	93	85.505	Ochotona_princeps
ENSCAPG00000013803	SPEN	100	88.713	ENSODEG00000016644	SPEN	99	88.741	Octodon_degus
ENSCAPG00000013803	SPEN	97	47.017	ENSONIG00000006573	-	95	79.771	Oreochromis_niloticus
ENSCAPG00000013803	SPEN	100	76.952	ENSOCUG00000010840	SPEN	99	76.622	Oryctolagus_cuniculus
ENSCAPG00000013803	SPEN	87	77.665	ENSORLG00000028894	-	99	77.665	Oryzias_latipes
ENSCAPG00000013803	SPEN	76	81.657	ENSORLG00000018414	si:ch1073-335m2.2	58	81.657	Oryzias_latipes
ENSCAPG00000013803	SPEN	76	81.657	ENSORLG00020009351	si:ch1073-335m2.2	83	81.657	Oryzias_latipes_hni
ENSCAPG00000013803	SPEN	87	77.665	ENSORLG00020007735	-	99	77.665	Oryzias_latipes_hni
ENSCAPG00000013803	SPEN	92	77.665	ENSORLG00015022085	-	93	77.665	Oryzias_latipes_hsok
ENSCAPG00000013803	SPEN	69	81.065	ENSORLG00015005537	si:ch1073-335m2.2	78	67.290	Oryzias_latipes_hsok
ENSCAPG00000013803	SPEN	73	65.639	ENSOMEG00000004509	si:ch1073-335m2.2	85	68.493	Oryzias_melastigma
ENSCAPG00000013803	SPEN	97	83.908	ENSOMEG00000007639	-	84	83.908	Oryzias_melastigma
ENSCAPG00000013803	SPEN	100	81.262	ENSOGAG00000025110	SPEN	99	80.961	Otolemur_garnettii
ENSCAPG00000013803	SPEN	100	80.621	ENSOARG00000008477	SPEN	99	80.904	Ovis_aries
ENSCAPG00000013803	SPEN	100	81.736	ENSPPAG00000035690	SPEN	100	81.462	Pan_paniscus
ENSCAPG00000013803	SPEN	100	81.709	ENSPTRG00000000210	SPEN	99	81.435	Pan_troglodytes
ENSCAPG00000013803	SPEN	100	80.591	ENSPANG00000006293	SPEN	99	80.720	Papio_anubis
ENSCAPG00000013803	SPEN	100	48.806	ENSPKIG00000010492	si:ch1073-335m2.2	99	48.204	Paramormyrops_kingsleyae
ENSCAPG00000013803	SPEN	85	85.000	ENSPKIG00000002617	SPEN	88	85.000	Paramormyrops_kingsleyae
ENSCAPG00000013803	SPEN	100	66.068	ENSPSIG00000008026	SPEN	100	65.848	Pelodiscus_sinensis
ENSCAPG00000013803	SPEN	99	78.326	ENSPEMG00000022997	Spen	100	78.396	Peromyscus_maniculatus_bairdii
ENSCAPG00000013803	SPEN	68	75.124	ENSPLAG00000016625	si:ch1073-335m2.2	71	75.124	Poecilia_latipinna
ENSCAPG00000013803	SPEN	100	43.218	ENSPMEG00000006764	-	80	71.548	Poecilia_mexicana
ENSCAPG00000013803	SPEN	74	75.124	ENSPMEG00000002674	si:ch1073-335m2.2	50	75.124	Poecilia_mexicana
ENSCAPG00000013803	SPEN	75	84.615	ENSPREG00000005357	si:ch1073-335m2.2	79	84.615	Poecilia_reticulata
ENSCAPG00000013803	SPEN	100	43.086	ENSPREG00000010399	-	80	71.548	Poecilia_reticulata
ENSCAPG00000013803	SPEN	100	81.873	ENSPPYG00000001834	SPEN	99	81.681	Pongo_abelii
ENSCAPG00000013803	SPEN	88	90.780	ENSPCAG00000009543	SPEN	92	86.068	Procavia_capensis
ENSCAPG00000013803	SPEN	100	80.959	ENSPCOG00000021735	SPEN	99	80.530	Propithecus_coquereli
ENSCAPG00000013803	SPEN	83	90.513	ENSPVAG00000013794	SPEN	83	90.571	Pteropus_vampyrus
ENSCAPG00000013803	SPEN	76	76.020	ENSPNYG00000009042	si:ch1073-335m2.2	87	76.020	Pundamilia_nyererei
ENSCAPG00000013803	SPEN	97	45.365	ENSPNYG00000012379	-	93	75.120	Pundamilia_nyererei
ENSCAPG00000013803	SPEN	92	70.000	ENSPNAG00000011452	si:ch1073-335m2.2	84	70.000	Pygocentrus_nattereri
ENSCAPG00000013803	SPEN	100	75.570	ENSRNOG00000033556	Spen	99	75.837	Rattus_norvegicus
ENSCAPG00000013803	SPEN	100	81.505	ENSRBIG00000039654	SPEN	100	81.084	Rhinopithecus_bieti
ENSCAPG00000013803	SPEN	100	81.371	ENSRROG00000035686	SPEN	100	80.944	Rhinopithecus_roxellana
ENSCAPG00000013803	SPEN	97	89.091	ENSSBOG00000028770	SPEN	99	89.091	Saimiri_boliviensis_boliviensis
ENSCAPG00000013803	SPEN	100	67.417	ENSSHAG00000004960	SPEN	98	93.295	Sarcophilus_harrisii
ENSCAPG00000013803	SPEN	91	83.158	ENSSFOG00015010267	si:ch1073-335m2.2	88	83.158	Scleropages_formosus
ENSCAPG00000013803	SPEN	85	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	89	65.741	Scleropages_formosus
ENSCAPG00000013803	SPEN	97	78.808	ENSSMAG00000008996	-	89	48.166	Scophthalmus_maximus
ENSCAPG00000013803	SPEN	82	72.596	ENSSMAG00000000125	si:ch1073-335m2.2	84	72.596	Scophthalmus_maximus
ENSCAPG00000013803	SPEN	96	82.514	ENSSDUG00000003476	-	81	73.222	Seriola_dumerili
ENSCAPG00000013803	SPEN	92	74.129	ENSSDUG00000008416	si:ch1073-335m2.2	90	74.129	Seriola_dumerili
ENSCAPG00000013803	SPEN	91	79.470	ENSSLDG00000012950	-	81	73.222	Seriola_lalandi_dorsalis
ENSCAPG00000013803	SPEN	63	72.596	ENSSLDG00000023347	si:ch1073-335m2.2	71	72.596	Seriola_lalandi_dorsalis
ENSCAPG00000013803	SPEN	89	62.950	ENSSPUG00000001866	-	100	62.623	Sphenodon_punctatus
ENSCAPG00000013803	SPEN	92	84.024	ENSSPAG00000012454	si:ch1073-335m2.2	89	84.024	Stegastes_partitus
ENSCAPG00000013803	SPEN	99	78.146	ENSSPAG00000006014	-	80	72.803	Stegastes_partitus
ENSCAPG00000013803	SPEN	84	79.929	ENSSSCG00000034484	SPEN	99	79.737	Sus_scrofa
ENSCAPG00000013803	SPEN	99	76.821	ENSTRUG00000024350	-	93	46.760	Takifugu_rubripes
ENSCAPG00000013803	SPEN	60	82.249	ENSTRUG00000021008	si:ch1073-335m2.2	70	82.249	Takifugu_rubripes
ENSCAPG00000013803	SPEN	96	74.968	ENSTNIG00000010907	-	94	74.589	Tetraodon_nigroviridis
ENSCAPG00000013803	SPEN	75	99.301	ENSTBEG00000003628	SPEN	75	99.306	Tupaia_belangeri
ENSCAPG00000013803	SPEN	82	94.884	ENSTTRG00000015704	SPEN	79	94.787	Tursiops_truncatus
ENSCAPG00000013803	SPEN	100	80.223	ENSUAMG00000009600	SPEN	99	82.507	Ursus_americanus
ENSCAPG00000013803	SPEN	100	79.298	ENSUMAG00000021641	SPEN	99	81.572	Ursus_maritimus
ENSCAPG00000013803	SPEN	95	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSCAPG00000013803	SPEN	100	54.062	ENSXETG00000023114	SPEN	99	53.363	Xenopus_tropicalis
ENSCAPG00000013803	SPEN	74	82.456	ENSXCOG00000004516	si:ch1073-335m2.2	79	82.456	Xiphophorus_couchianus
ENSCAPG00000013803	SPEN	100	43.064	ENSXMAG00000021384	-	80	69.456	Xiphophorus_maculatus