EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000013851 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Plus strand
Length
17286 bases
Position
chrAVPZ01000733.1:6964370-6981655
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000013167CPSF73-100_CPF11718.82e-5511
ENSCAPP00000013167Beta-CaspPF10996.83e-3411
ENSCAPP00000013167Lactamase_BPF00753.277.2e-1911
ENSCAPP00000013167RMMBLPF07521.126.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000016927CPSF3-2012004-ENSCAPP00000013167667 (aa)--
Gene Model
Click here to download ENSCAPG00000013851's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013851's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000013851CPSF36631.166ENSCAPG00000012788INTS116931.166
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000013851CPSF310097.901ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCAPG00000013851CPSF37396.907ENSAPOG00000012241CPSF38996.154Acanthochromis_polyacanthus
ENSCAPG00000013851CPSF39985.564ENSAPOG00000022087cpsf39685.564Acanthochromis_polyacanthus
ENSCAPG00000013851CPSF310097.901ENSAMEG00000008493CPSF39897.901Ailuropoda_melanoleuca
ENSCAPG00000013851CPSF39486.825ENSACIG00000023663CPSF39986.825Amphilophus_citrinellus
ENSCAPG00000013851CPSF39483.599ENSACIG00000009846cpsf39983.599Amphilophus_citrinellus
ENSCAPG00000013851CPSF39987.988ENSAOCG00000010077CPSF39687.988Amphiprion_ocellaris
ENSCAPG00000013851CPSF39985.714ENSAOCG00000022056cpsf39191.115Amphiprion_ocellaris
ENSCAPG00000013851CPSF39987.988ENSAPEG00000021167CPSF39985.238Amphiprion_percula
ENSCAPG00000013851CPSF39985.865ENSAPEG00000019526cpsf39982.962Amphiprion_percula
ENSCAPG00000013851CPSF39985.865ENSATEG00000003959cpsf39983.439Anabas_testudineus
ENSCAPG00000013851CPSF39983.333ENSATEG00000014525CPSF39683.333Anabas_testudineus
ENSCAPG00000013851CPSF310094.753ENSAPLG00000006941CPSF39894.753Anas_platyrhynchos
ENSCAPG00000013851CPSF39592.126ENSACAG00000001759CPSF39992.126Anolis_carolinensis
ENSCAPG00000013851CPSF310091.904ENSANAG00000031254CPSF39991.904Aotus_nancymaae
ENSCAPG00000013851CPSF39986.015ENSACLG00000014484cpsf39986.015Astatotilapia_calliptera
ENSCAPG00000013851CPSF39486.667ENSACLG00000018846CPSF39986.667Astatotilapia_calliptera
ENSCAPG00000013851CPSF39987.688ENSAMXG00000004786cpsf39985.056Astyanax_mexicanus
ENSCAPG00000013851CPSF310098.051ENSBTAG00000019735CPSF39898.051Bos_taurus
ENSCAPG00000013851CPSF39159.390WBGene00013460cpsf-38759.390Caenorhabditis_elegans
ENSCAPG00000013851CPSF310097.451ENSCJAG00000006276CPSF39897.451Callithrix_jacchus
ENSCAPG00000013851CPSF310097.901ENSCAFG00000003375CPSF39397.901Canis_familiaris
ENSCAPG00000013851CPSF39098.339ENSCAFG00020026799CPSF39798.339Canis_lupus_dingo
ENSCAPG00000013851CPSF310098.051ENSCHIG00000013973CPSF39898.051Capra_hircus
ENSCAPG00000013851CPSF310097.751ENSTSYG00000002967CPSF39897.751Carlito_syrichta
ENSCAPG00000013851CPSF310099.850ENSCPOG00000011299CPSF39899.850Cavia_porcellus
ENSCAPG00000013851CPSF310097.601ENSCCAG00000036730CPSF39997.601Cebus_capucinus
ENSCAPG00000013851CPSF310095.060ENSCATG00000014770CPSF39799.113Cercocebus_atys
ENSCAPG00000013851CPSF310099.250ENSCLAG00000002727CPSF39899.250Chinchilla_lanigera
ENSCAPG00000013851CPSF310089.805ENSCSAG00000007125CPSF39789.805Chlorocebus_sabaeus
ENSCAPG00000013851CPSF389100.000ENSCHOG00000000180CPSF38571.053Choloepus_hoffmanni
ENSCAPG00000013851CPSF39994.595ENSCPBG00000014074CPSF39694.595Chrysemys_picta_bellii
ENSCAPG00000013851CPSF39968.155ENSCING00000007214-9668.155Ciona_intestinalis
ENSCAPG00000013851CPSF310084.799ENSCANG00000034435CPSF39784.799Colobus_angolensis_palliatus
ENSCAPG00000013851CPSF310097.451ENSCGRG00001013134Cpsf39897.451Cricetulus_griseus_chok1gshd
ENSCAPG00000013851CPSF310097.451ENSCGRG00000018319Cpsf39897.451Cricetulus_griseus_crigri
ENSCAPG00000013851CPSF39987.256ENSCSEG00000002021CPSF39986.862Cynoglossus_semilaevis
ENSCAPG00000013851CPSF39988.288ENSCVAG00000015067CPSF39688.288Cyprinodon_variegatus
ENSCAPG00000013851CPSF39988.138ENSDARG00000027649cpsf39688.138Danio_rerio
ENSCAPG00000013851CPSF310096.557ENSDNOG00000008940CPSF39396.557Dasypus_novemcinctus
ENSCAPG00000013851CPSF39597.634ENSDORG00000014263Cpsf39797.634Dipodomys_ordii
ENSCAPG00000013851CPSF39967.218FBgn0261065Cpsf739667.218Drosophila_melanogaster
ENSCAPG00000013851CPSF39286.460ENSETEG00000003893CPSF39486.460Echinops_telfairi
ENSCAPG00000013851CPSF39978.394ENSEBUG00000009018cpsf39678.540Eptatretus_burgeri
ENSCAPG00000013851CPSF310097.901ENSEASG00005003970CPSF39897.901Equus_asinus_asinus
ENSCAPG00000013851CPSF310097.901ENSECAG00000019911CPSF39897.901Equus_caballus
ENSCAPG00000013851CPSF310081.859ENSEEUG00000015422CPSF39881.859Erinaceus_europaeus
ENSCAPG00000013851CPSF39988.120ENSELUG00000013775cpsf39985.197Esox_lucius
ENSCAPG00000013851CPSF310098.051ENSFCAG00000007852CPSF310097.991Felis_catus
ENSCAPG00000013851CPSF39793.972ENSFALG00000006572CPSF310093.972Ficedula_albicollis
ENSCAPG00000013851CPSF39998.647ENSFDAG00000006317CPSF39798.647Fukomys_damarensis
ENSCAPG00000013851CPSF39985.263ENSFHEG00000014774cpsf39685.263Fundulus_heteroclitus
ENSCAPG00000013851CPSF36169.756ENSFHEG00000012186CPSF39969.756Fundulus_heteroclitus
ENSCAPG00000013851CPSF39986.787ENSGMOG00000003157cpsf39686.787Gadus_morhua
ENSCAPG00000013851CPSF310094.003ENSGALG00000016424CPSF39993.701Gallus_gallus
ENSCAPG00000013851CPSF39988.120ENSGAFG00000008016CPSF39688.120Gambusia_affinis
ENSCAPG00000013851CPSF39482.989ENSGAFG00000019449cpsf39982.989Gambusia_affinis
ENSCAPG00000013851CPSF37091.863ENSGAGG00000025583CPSF39391.863Gopherus_agassizii
ENSCAPG00000013851CPSF310095.455ENSGGOG00000001757CPSF310097.795Gorilla_gorilla
ENSCAPG00000013851CPSF39986.015ENSHBUG00000001188cpsf39983.599Haplochromis_burtoni
ENSCAPG00000013851CPSF36181.975ENSHBUG00000014332CPSF39981.975Haplochromis_burtoni
ENSCAPG00000013851CPSF310098.351ENSHGLG00000000666CPSF39798.351Heterocephalus_glaber_female
ENSCAPG00000013851CPSF310098.351ENSHGLG00100007765CPSF39798.351Heterocephalus_glaber_male
ENSCAPG00000013851CPSF39986.336ENSHCOG00000015957CPSF39586.336Hippocampus_comes
ENSCAPG00000013851CPSF39985.435ENSHCOG00000007251cpsf39685.435Hippocampus_comes
ENSCAPG00000013851CPSF39986.787ENSIPUG00000023488cpsf39686.787Ictalurus_punctatus
ENSCAPG00000013851CPSF310097.301ENSSTOG00000004476CPSF39897.301Ictidomys_tridecemlineatus
ENSCAPG00000013851CPSF310096.552ENSJJAG00000023415Cpsf39896.552Jaculus_jaculus
ENSCAPG00000013851CPSF39984.962ENSKMAG00000002806cpsf39684.962Kryptolebias_marmoratus
ENSCAPG00000013851CPSF39987.988ENSKMAG00000007317CPSF39687.988Kryptolebias_marmoratus
ENSCAPG00000013851CPSF39979.850ENSLBEG00000020569cpsf39279.850Labrus_bergylta
ENSCAPG00000013851CPSF35680.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSCAPG00000013851CPSF39588.801ENSLBEG00000013492CPSF39688.801Labrus_bergylta
ENSCAPG00000013851CPSF39983.008ENSLACG00000008308CPSF39683.008Latimeria_chalumnae
ENSCAPG00000013851CPSF39988.456ENSLOCG00000016823cpsf39688.456Lepisosteus_oculatus
ENSCAPG00000013851CPSF310097.451ENSLAFG00000009467CPSF39897.451Loxodonta_africana
ENSCAPG00000013851CPSF310097.751ENSMFAG00000001339CPSF39997.678Macaca_fascicularis
ENSCAPG00000013851CPSF39797.682ENSMMUG00000018038CPSF310097.682Macaca_mulatta
ENSCAPG00000013851CPSF310084.708ENSMNEG00000039447CPSF39784.708Macaca_nemestrina
ENSCAPG00000013851CPSF310097.901ENSMLEG00000026825CPSF39897.901Mandrillus_leucophaeus
ENSCAPG00000013851CPSF39485.443ENSMAMG00000008835CPSF39985.443Mastacembelus_armatus
ENSCAPG00000013851CPSF39985.564ENSMAMG00000003076cpsf39685.564Mastacembelus_armatus
ENSCAPG00000013851CPSF39986.015ENSMZEG00005014358cpsf39983.599Maylandia_zebra
ENSCAPG00000013851CPSF39988.739ENSMZEG00005006258CPSF39986.667Maylandia_zebra
ENSCAPG00000013851CPSF310094.153ENSMGAG00000013995CPSF310094.153Meleagris_gallopavo
ENSCAPG00000013851CPSF35694.415ENSMAUG00000000166Cpsf310094.415Mesocricetus_auratus
ENSCAPG00000013851CPSF310092.354ENSMICG00000002363CPSF310091.875Microcebus_murinus
ENSCAPG00000013851CPSF310092.954ENSMOCG00000020067Cpsf39792.954Microtus_ochrogaster
ENSCAPG00000013851CPSF37577.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSCAPG00000013851CPSF39782.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSCAPG00000013851CPSF310094.955ENSMODG00000014703CPSF39894.955Monodelphis_domestica
ENSCAPG00000013851CPSF39583.438ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSCAPG00000013851CPSF39986.165ENSMALG00000016416cpsf39983.758Monopterus_albus
ENSCAPG00000013851CPSF310097.151MGP_CAROLIEiJ_G0017640Cpsf39897.151Mus_caroli
ENSCAPG00000013851CPSF310097.151ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSCAPG00000013851CPSF310097.001MGP_PahariEiJ_G0029397Cpsf39897.001Mus_pahari
ENSCAPG00000013851CPSF310097.151MGP_SPRETEiJ_G0018481Cpsf39897.151Mus_spretus
ENSCAPG00000013851CPSF310097.301ENSMPUG00000013213CPSF39897.301Mustela_putorius_furo
ENSCAPG00000013851CPSF310097.156ENSMLUG00000010636CPSF39897.156Myotis_lucifugus
ENSCAPG00000013851CPSF310097.151ENSNGAG00000019836Cpsf39897.151Nannospalax_galili
ENSCAPG00000013851CPSF39985.564ENSNBRG00000004770cpsf39983.121Neolamprologus_brichardi
ENSCAPG00000013851CPSF39486.667ENSNBRG00000010525CPSF39986.667Neolamprologus_brichardi
ENSCAPG00000013851CPSF310097.751ENSNLEG00000013359CPSF310097.682Nomascus_leucogenys
ENSCAPG00000013851CPSF39765.325ENSMEUG00000013117-9465.325Notamacropus_eugenii
ENSCAPG00000013851CPSF310088.006ENSOPRG00000008902CPSF39888.006Ochotona_princeps
ENSCAPG00000013851CPSF310098.801ENSODEG00000003129CPSF39898.801Octodon_degus
ENSCAPG00000013851CPSF39986.316ENSONIG00000018812cpsf39686.316Oreochromis_niloticus
ENSCAPG00000013851CPSF38595.213ENSOANG00000008577CPSF310095.213Ornithorhynchus_anatinus
ENSCAPG00000013851CPSF310097.451ENSOCUG00000003728CPSF39897.451Oryctolagus_cuniculus
ENSCAPG00000013851CPSF39983.759ENSORLG00000018854cpsf39683.759Oryzias_latipes
ENSCAPG00000013851CPSF39983.910ENSORLG00020013331cpsf39683.910Oryzias_latipes_hni
ENSCAPG00000013851CPSF39983.759ENSORLG00015011017cpsf39683.759Oryzias_latipes_hsok
ENSCAPG00000013851CPSF39983.910ENSOMEG00000010647cpsf39283.910Oryzias_melastigma
ENSCAPG00000013851CPSF310087.556ENSOGAG00000001680CPSF39887.556Otolemur_garnettii
ENSCAPG00000013851CPSF310098.051ENSOARG00000015073CPSF39898.051Ovis_aries
ENSCAPG00000013851CPSF310097.901ENSPPAG00000042457CPSF39897.901Pan_paniscus
ENSCAPG00000013851CPSF310097.751ENSPPRG00000016790CPSF310097.682Panthera_pardus
ENSCAPG00000013851CPSF310097.751ENSPTIG00000003920CPSF310097.638Panthera_tigris_altaica
ENSCAPG00000013851CPSF310097.901ENSPTRG00000011638CPSF39897.901Pan_troglodytes
ENSCAPG00000013851CPSF310097.601ENSPANG00000016798CPSF39897.601Papio_anubis
ENSCAPG00000013851CPSF39989.323ENSPKIG00000023646cpsf39988.992Paramormyrops_kingsleyae
ENSCAPG00000013851CPSF310093.853ENSPSIG00000016144CPSF39893.853Pelodiscus_sinensis
ENSCAPG00000013851CPSF38585.515ENSPMGG00000006141-9985.515Periophthalmus_magnuspinnatus
ENSCAPG00000013851CPSF36179.753ENSPMGG00000015311CPSF39979.753Periophthalmus_magnuspinnatus
ENSCAPG00000013851CPSF310097.001ENSPEMG00000017668Cpsf39897.001Peromyscus_maniculatus_bairdii
ENSCAPG00000013851CPSF37890.595ENSPMAG00000004841cpsf39690.595Petromyzon_marinus
ENSCAPG00000013851CPSF310096.402ENSPCIG00000009823CPSF39896.626Phascolarctos_cinereus
ENSCAPG00000013851CPSF39984.685ENSPFOG00000015922cpsf39684.685Poecilia_formosa
ENSCAPG00000013851CPSF39987.669ENSPFOG00000010418-9687.669Poecilia_formosa
ENSCAPG00000013851CPSF39984.685ENSPLAG00000000882cpsf39684.685Poecilia_latipinna
ENSCAPG00000013851CPSF36180.941ENSPLAG00000021300-9980.941Poecilia_latipinna
ENSCAPG00000013851CPSF39984.835ENSPMEG00000018309cpsf39684.835Poecilia_mexicana
ENSCAPG00000013851CPSF39482.512ENSPREG00000014875cpsf39982.512Poecilia_reticulata
ENSCAPG00000013851CPSF39982.556ENSPREG00000004482CPSF39682.556Poecilia_reticulata
ENSCAPG00000013851CPSF310093.253ENSPPYG00000012666CPSF39793.253Pongo_abelii
ENSCAPG00000013851CPSF39264.274ENSPCAG00000015042CPSF39464.274Procavia_capensis
ENSCAPG00000013851CPSF39087.500ENSPCOG00000023016CPSF39787.500Propithecus_coquereli
ENSCAPG00000013851CPSF39997.744ENSPVAG00000005324CPSF39797.744Pteropus_vampyrus
ENSCAPG00000013851CPSF39986.015ENSPNYG00000004405cpsf39983.599Pundamilia_nyererei
ENSCAPG00000013851CPSF38191.513ENSPNYG00000021047CPSF39091.513Pundamilia_nyererei
ENSCAPG00000013851CPSF39987.538ENSPNAG00000023060cpsf39985.374Pygocentrus_nattereri
ENSCAPG00000013851CPSF39997.143ENSRNOG00000052418Cpsf39797.143Rattus_norvegicus
ENSCAPG00000013851CPSF310091.754ENSRBIG00000041615CPSF39993.199Rhinopithecus_bieti
ENSCAPG00000013851CPSF310097.901ENSRROG00000033792CPSF39897.901Rhinopithecus_roxellana
ENSCAPG00000013851CPSF39640.323YLR277CYSH19540.323Saccharomyces_cerevisiae
ENSCAPG00000013851CPSF310093.294ENSSBOG00000027263CPSF39793.294Saimiri_boliviensis_boliviensis
ENSCAPG00000013851CPSF310096.552ENSSHAG00000007024CPSF39896.552Sarcophilus_harrisii
ENSCAPG00000013851CPSF39989.323ENSSFOG00015002108cpsf39988.784Scleropages_formosus
ENSCAPG00000013851CPSF39587.697ENSSMAG00000020534CPSF39387.697Scophthalmus_maximus
ENSCAPG00000013851CPSF39986.316ENSSDUG00000002828cpsf39486.316Seriola_dumerili
ENSCAPG00000013851CPSF39988.288ENSSDUG00000018498CPSF39986.190Seriola_dumerili
ENSCAPG00000013851CPSF39986.316ENSSLDG00000008469cpsf39487.789Seriola_lalandi_dorsalis
ENSCAPG00000013851CPSF39988.288ENSSLDG00000005234CPSF39986.032Seriola_lalandi_dorsalis
ENSCAPG00000013851CPSF310079.910ENSSARG00000005186CPSF39879.910Sorex_araneus
ENSCAPG00000013851CPSF310091.207ENSSPUG00000015525CPSF39791.207Sphenodon_punctatus
ENSCAPG00000013851CPSF39985.714ENSSPAG00000018579cpsf39685.714Stegastes_partitus
ENSCAPG00000013851CPSF39987.988ENSSPAG00000002906CPSF39986.032Stegastes_partitus
ENSCAPG00000013851CPSF39998.048ENSSSCG00000020799CPSF39996.645Sus_scrofa
ENSCAPG00000013851CPSF310094.003ENSTGUG00000013016CPSF39894.003Taeniopygia_guttata
ENSCAPG00000013851CPSF36172.482ENSTRUG00000013905CPSF39972.482Takifugu_rubripes
ENSCAPG00000013851CPSF39985.113ENSTRUG00000007030cpsf39585.113Takifugu_rubripes
ENSCAPG00000013851CPSF38593.391ENSTBEG00000002707CPSF38293.391Tupaia_belangeri
ENSCAPG00000013851CPSF38793.548ENSTTRG00000000861CPSF38593.548Tursiops_truncatus
ENSCAPG00000013851CPSF39697.969ENSUAMG00000007535CPSF39297.969Ursus_americanus
ENSCAPG00000013851CPSF39797.836ENSUMAG00000003676CPSF310097.836Ursus_maritimus
ENSCAPG00000013851CPSF39595.268ENSVPAG00000008041CPSF310095.268Vicugna_pacos
ENSCAPG00000013851CPSF310097.901ENSVVUG00000002194CPSF39897.901Vulpes_vulpes
ENSCAPG00000013851CPSF39989.624ENSXETG00000008263cpsf39689.624Xenopus_tropicalis
ENSCAPG00000013851CPSF35679.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSCAPG00000013851CPSF39984.858ENSXCOG00000019695cpsf39684.858Xiphophorus_couchianus
ENSCAPG00000013851CPSF39984.535ENSXMAG00000009784cpsf39984.056Xiphophorus_maculatus
ENSCAPG00000013851CPSF39987.820ENSXMAG00000027291CPSF39687.820Xiphophorus_maculatus

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