EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000013937 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 16167 bases
Position: chrAVPZ01000046.1:469856-486022
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000013297	zf-C2H2	PF00096.26	2.4e-19	1	3
ENSCAPP00000013297	zf-C2H2	PF00096.26	2.4e-19	2	3
ENSCAPP00000013297	zf-C2H2	PF00096.26	2.4e-19	3	3
ENSCAPP00000013297	zf-met	PF12874.7	8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000017057	PRDM4-201	2397	-	ENSCAPP00000013297	798 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013937	PRDM4	99	90.613	ENSG00000110851	PRDM4	95	97.183	Homo_sapiens
ENSCAPG00000013937	PRDM4	99	91.000	ENSAMEG00000016174	PRDM4	99	90.750	Ailuropoda_melanoleuca
ENSCAPG00000013937	PRDM4	99	83.354	ENSAPLG00000009846	PRDM4	99	83.229	Anas_platyrhynchos
ENSCAPG00000013937	PRDM4	99	90.738	ENSANAG00000024800	PRDM4	99	89.737	Aotus_nancymaae
ENSCAPG00000013937	PRDM4	99	90.864	ENSBTAG00000012999	PRDM4	99	90.363	Bos_taurus
ENSCAPG00000013937	PRDM4	99	90.738	ENSCJAG00000015261	PRDM4	99	90.864	Callithrix_jacchus
ENSCAPG00000013937	PRDM4	99	91.489	ENSCAFG00000001788	PRDM4	99	90.989	Canis_familiaris
ENSCAPG00000013937	PRDM4	99	91.489	ENSCAFG00020004916	PRDM4	99	90.989	Canis_lupus_dingo
ENSCAPG00000013937	PRDM4	99	90.864	ENSCHIG00000019409	PRDM4	99	90.864	Capra_hircus
ENSCAPG00000013937	PRDM4	99	90.738	ENSTSYG00000009248	PRDM4	99	90.738	Carlito_syrichta
ENSCAPG00000013937	PRDM4	99	98.882	ENSCPOG00000022385	PRDM4	100	98.882	Cavia_porcellus
ENSCAPG00000013937	PRDM4	99	90.864	ENSCCAG00000036033	PRDM4	99	90.989	Cebus_capucinus
ENSCAPG00000013937	PRDM4	99	90.238	ENSCATG00000044797	PRDM4	99	90.363	Cercocebus_atys
ENSCAPG00000013937	PRDM4	99	91.563	ENSCLAG00000007545	PRDM4	100	91.315	Chinchilla_lanigera
ENSCAPG00000013937	PRDM4	99	90.613	ENSCSAG00000002896	PRDM4	99	90.738	Chlorocebus_sabaeus
ENSCAPG00000013937	PRDM4	71	96.226	ENSCHOG00000001744	PRDM4	82	96.226	Choloepus_hoffmanni
ENSCAPG00000013937	PRDM4	99	83.730	ENSCPBG00000023187	PRDM4	100	83.730	Chrysemys_picta_bellii
ENSCAPG00000013937	PRDM4	99	90.363	ENSCANG00000021804	PRDM4	99	90.488	Colobus_angolensis_palliatus
ENSCAPG00000013937	PRDM4	99	88.089	ENSCGRG00001015102	-	100	88.089	Cricetulus_griseus_chok1gshd
ENSCAPG00000013937	PRDM4	96	88.031	ENSCGRG00000004044	-	100	88.031	Cricetulus_griseus_crigri
ENSCAPG00000013937	PRDM4	99	89.487	ENSDNOG00000032478	PRDM4	99	91.354	Dasypus_novemcinctus
ENSCAPG00000013937	PRDM4	99	76.309	ENSDORG00000015081	-	100	76.683	Dipodomys_ordii
ENSCAPG00000013937	PRDM4	93	46.262	ENSEBUG00000003775	prdm4	99	46.006	Eptatretus_burgeri
ENSCAPG00000013937	PRDM4	99	90.613	ENSECAG00000015423	PRDM4	99	90.613	Equus_caballus
ENSCAPG00000013937	PRDM4	94	86.853	ENSEEUG00000006569	PRDM4	99	86.454	Erinaceus_europaeus
ENSCAPG00000013937	PRDM4	99	59.611	ENSELUG00000015265	prdm4	99	59.174	Esox_lucius
ENSCAPG00000013937	PRDM4	99	91.239	ENSFCAG00000022478	PRDM4	99	90.738	Felis_catus
ENSCAPG00000013937	PRDM4	99	82.979	ENSFALG00000013342	PRDM4	100	82.979	Ficedula_albicollis
ENSCAPG00000013937	PRDM4	99	83.521	ENSGALG00000012619	PRDM4	99	83.396	Gallus_gallus
ENSCAPG00000013937	PRDM4	99	83.730	ENSGAGG00000002763	PRDM4	95	83.730	Gopherus_agassizii
ENSCAPG00000013937	PRDM4	99	90.488	ENSGGOG00000001244	PRDM4	99	90.613	Gorilla_gorilla
ENSCAPG00000013937	PRDM4	100	91.000	ENSHGLG00000004590	PRDM4	98	91.000	Heterocephalus_glaber_female
ENSCAPG00000013937	PRDM4	99	89.839	ENSHGLG00100007464	PRDM4	100	89.839	Heterocephalus_glaber_male
ENSCAPG00000013937	PRDM4	95	60.594	ENSIPUG00000024162	prdm4	94	60.594	Ictalurus_punctatus
ENSCAPG00000013937	PRDM4	99	89.862	ENSSTOG00000016168	PRDM4	99	89.987	Ictidomys_tridecemlineatus
ENSCAPG00000013937	PRDM4	99	88.015	ENSJJAG00000022448	-	95	87.263	Jaculus_jaculus
ENSCAPG00000013937	PRDM4	99	70.916	ENSLACG00000007452	PRDM4	99	71.163	Latimeria_chalumnae
ENSCAPG00000013937	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	53.680	Lepisosteus_oculatus
ENSCAPG00000013937	PRDM4	94	92.084	ENSLAFG00000001483	PRDM4	100	90.380	Loxodonta_africana
ENSCAPG00000013937	PRDM4	99	90.613	ENSMFAG00000041862	PRDM4	99	90.738	Macaca_fascicularis
ENSCAPG00000013937	PRDM4	99	90.613	ENSMMUG00000015550	PRDM4	99	90.738	Macaca_mulatta
ENSCAPG00000013937	PRDM4	99	90.613	ENSMNEG00000032319	PRDM4	99	90.738	Macaca_nemestrina
ENSCAPG00000013937	PRDM4	99	90.488	ENSMLEG00000039607	PRDM4	99	90.613	Mandrillus_leucophaeus
ENSCAPG00000013937	PRDM4	99	75.686	ENSMGAG00000012815	PRDM4	100	75.561	Meleagris_gallopavo
ENSCAPG00000013937	PRDM4	99	89.362	ENSMICG00000007807	PRDM4	99	89.362	Microcebus_murinus
ENSCAPG00000013937	PRDM4	99	89.862	ENSMOCG00000000753	Prdm4	99	89.862	Microtus_ochrogaster
ENSCAPG00000013937	PRDM4	99	88.861	ENSMUSG00000035529	Prdm4	100	88.861	Mus_musculus
ENSCAPG00000013937	PRDM4	99	89.237	MGP_PahariEiJ_G0031398	Prdm4	100	89.237	Mus_pahari
ENSCAPG00000013937	PRDM4	99	88.861	MGP_SPRETEiJ_G0016505	Prdm4	100	88.861	Mus_spretus
ENSCAPG00000013937	PRDM4	99	85.056	ENSMPUG00000012238	PRDM4	99	84.060	Mustela_putorius_furo
ENSCAPG00000013937	PRDM4	99	90.613	ENSMLUG00000000767	PRDM4	99	90.613	Myotis_lucifugus
ENSCAPG00000013937	PRDM4	99	89.612	ENSNGAG00000018627	Prdm4	100	89.612	Nannospalax_galili
ENSCAPG00000013937	PRDM4	99	90.613	ENSNLEG00000006748	PRDM4	99	90.738	Nomascus_leucogenys
ENSCAPG00000013937	PRDM4	89	86.682	ENSMEUG00000004495	PRDM4	89	86.215	Notamacropus_eugenii
ENSCAPG00000013937	PRDM4	89	90.027	ENSOPRG00000010192	PRDM4	89	90.237	Ochotona_princeps
ENSCAPG00000013937	PRDM4	99	89.862	ENSODEG00000014750	PRDM4	99	90.613	Octodon_degus
ENSCAPG00000013937	PRDM4	99	86.608	ENSOANG00000005526	PRDM4	99	86.358	Ornithorhynchus_anatinus
ENSCAPG00000013937	PRDM4	93	92.990	ENSOCUG00000012859	PRDM4	96	92.990	Oryctolagus_cuniculus
ENSCAPG00000013937	PRDM4	99	90.488	ENSOGAG00000011945	PRDM4	100	89.987	Otolemur_garnettii
ENSCAPG00000013937	PRDM4	99	90.488	ENSOARG00000017955	PRDM4	99	90.488	Ovis_aries
ENSCAPG00000013937	PRDM4	99	90.613	ENSPPAG00000038438	PRDM4	99	90.738	Pan_paniscus
ENSCAPG00000013937	PRDM4	99	91.239	ENSPPRG00000004144	PRDM4	99	90.738	Panthera_pardus
ENSCAPG00000013937	PRDM4	99	91.239	ENSPTIG00000005847	PRDM4	99	90.738	Panthera_tigris_altaica
ENSCAPG00000013937	PRDM4	99	90.613	ENSPTRG00000005400	PRDM4	99	90.738	Pan_troglodytes
ENSCAPG00000013937	PRDM4	99	90.613	ENSPANG00000022084	PRDM4	99	90.738	Papio_anubis
ENSCAPG00000013937	PRDM4	99	59.881	ENSPKIG00000000875	prdm4	99	59.405	Paramormyrops_kingsleyae
ENSCAPG00000013937	PRDM4	90	76.438	ENSPSIG00000012066	PRDM4	100	76.994	Pelodiscus_sinensis
ENSCAPG00000013937	PRDM4	100	90.125	ENSPEMG00000014598	Prdm4	100	90.238	Peromyscus_maniculatus_bairdii
ENSCAPG00000013937	PRDM4	99	86.783	ENSPCIG00000009471	PRDM4	99	86.534	Phascolarctos_cinereus
ENSCAPG00000013937	PRDM4	99	90.989	ENSPPYG00000004913	PRDM4	99	91.114	Pongo_abelii
ENSCAPG00000013937	PRDM4	83	93.182	ENSPCAG00000009987	PRDM4	83	93.182	Procavia_capensis
ENSCAPG00000013937	PRDM4	99	89.111	ENSPCOG00000021060	PRDM4	99	89.111	Propithecus_coquereli
ENSCAPG00000013937	PRDM4	99	90.613	ENSPVAG00000001596	PRDM4	99	90.613	Pteropus_vampyrus
ENSCAPG00000013937	PRDM4	99	89.237	ENSRNOG00000004962	Prdm4	100	89.237	Rattus_norvegicus
ENSCAPG00000013937	PRDM4	99	90.363	ENSRBIG00000035488	PRDM4	99	90.488	Rhinopithecus_bieti
ENSCAPG00000013937	PRDM4	99	90.488	ENSRROG00000012779	PRDM4	99	90.613	Rhinopithecus_roxellana
ENSCAPG00000013937	PRDM4	99	90.738	ENSSBOG00000000403	PRDM4	99	90.864	Saimiri_boliviensis_boliviensis
ENSCAPG00000013937	PRDM4	99	63.145	ENSSFOG00015023358	prdm4	98	62.485	Scleropages_formosus
ENSCAPG00000013937	PRDM4	99	90.738	ENSSSCG00000000160	PRDM4	99	90.738	Sus_scrofa
ENSCAPG00000013937	PRDM4	99	83.730	ENSTGUG00000010962	-	99	83.730	Taeniopygia_guttata
ENSCAPG00000013937	PRDM4	73	83.788	ENSTBEG00000001732	PRDM4	84	83.788	Tupaia_belangeri
ENSCAPG00000013937	PRDM4	99	91.114	ENSTTRG00000011056	PRDM4	99	91.114	Tursiops_truncatus
ENSCAPG00000013937	PRDM4	99	90.989	ENSUAMG00000022796	PRDM4	99	90.488	Ursus_americanus
ENSCAPG00000013937	PRDM4	99	90.989	ENSUMAG00000017231	PRDM4	99	90.488	Ursus_maritimus
ENSCAPG00000013937	PRDM4	99	90.989	ENSVPAG00000002215	PRDM4	100	90.989	Vicugna_pacos
ENSCAPG00000013937	PRDM4	99	91.489	ENSVVUG00000023397	PRDM4	99	90.989	Vulpes_vulpes