EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000013955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 35641 bases
Position: chrAVPZ01000012.1:24116116-24151756
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000013308	DUF2465	PF10239.9	2e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000017068	-	645	-	ENSCAPP00000013308	215 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000013955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000013955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000013955	-	61	47.059	ENSCAPG00000009838	-	85	44.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000013955	-	88	40.838	ENSG00000130244	FAM98C	51	38.798	Homo_sapiens
ENSCAPG00000013955	-	87	65.426	ENSG00000119812	FAM98A	52	58.896	Homo_sapiens
ENSCAPG00000013955	-	85	50.000	ENSACAG00000002418	FAM98C	52	48.108	Anolis_carolinensis
ENSCAPG00000013955	-	84	76.214	ENSANAG00000024106	-	73	76.214	Aotus_nancymaae
ENSCAPG00000013955	-	97	39.252	ENSAMXG00000042035	im:7138535	50	37.433	Astyanax_mexicanus
ENSCAPG00000013955	-	96	91.209	ENSBTAG00000021870	FAM98B	50	91.209	Bos_taurus
ENSCAPG00000013955	-	77	86.667	ENSCAFG00000008649	FAM98B	52	86.503	Canis_familiaris
ENSCAPG00000013955	-	88	43.367	ENSCAFG00020017778	FAM98C	85	49.194	Canis_lupus_dingo
ENSCAPG00000013955	-	87	64.894	ENSCAFG00020023008	FAM98A	51	58.228	Canis_lupus_dingo
ENSCAPG00000013955	-	96	90.110	ENSCHIG00000016469	FAM98B	50	90.110	Capra_hircus
ENSCAPG00000013955	-	100	98.429	ENSCPOG00000027558	FAM98B	51	98.429	Cavia_porcellus
ENSCAPG00000013955	-	61	46.324	ENSCPOG00000005585	-	74	46.667	Cavia_porcellus
ENSCAPG00000013955	-	85	90.659	ENSCCAG00000037688	FAM98B	50	90.659	Cebus_capucinus
ENSCAPG00000013955	-	88	41.361	ENSCATG00000023670	FAM98C	51	39.344	Cercocebus_atys
ENSCAPG00000013955	-	71	90.789	ENSCATG00000032790	-	57	90.789	Cercocebus_atys
ENSCAPG00000013955	-	61	48.905	ENSCLAG00000011123	-	85	45.968	Chinchilla_lanigera
ENSCAPG00000013955	-	100	96.859	ENSCLAG00000008407	FAM98B	55	96.859	Chinchilla_lanigera
ENSCAPG00000013955	-	88	41.361	ENSCSAG00000004058	FAM98C	90	39.344	Chlorocebus_sabaeus
ENSCAPG00000013955	-	85	80.769	ENSCPBG00000000742	FAM98B	50	77.632	Chrysemys_picta_bellii
ENSCAPG00000013955	-	82	49.162	ENSCPBG00000008728	-	72	48.864	Chrysemys_picta_bellii
ENSCAPG00000013955	-	73	52.532	ENSCSAVG00000005076	-	67	52.980	Ciona_savignyi
ENSCAPG00000013955	-	85	45.455	ENSCANG00000030536	-	51	50.336	Colobus_angolensis_palliatus
ENSCAPG00000013955	-	89	91.617	ENSCANG00000038477	FAM98B	71	90.960	Colobus_angolensis_palliatus
ENSCAPG00000013955	-	88	40.838	ENSCANG00000026868	FAM98C	91	38.798	Colobus_angolensis_palliatus
ENSCAPG00000013955	-	88	42.408	ENSCGRG00001013657	Fam98c	52	39.344	Cricetulus_griseus_chok1gshd
ENSCAPG00000013955	-	96	91.398	ENSCGRG00001011148	Fam98b	58	91.398	Cricetulus_griseus_chok1gshd
ENSCAPG00000013955	-	60	48.837	ENSCGRG00000011604	-	85	45.968	Cricetulus_griseus_crigri
ENSCAPG00000013955	-	99	37.788	ENSCSEG00000009775	im:7138535	50	35.789	Cynoglossus_semilaevis
ENSCAPG00000013955	-	71	52.941	ENSCVAG00000022569	fam98a	51	52.941	Cyprinodon_variegatus
ENSCAPG00000013955	-	84	55.801	ENSDARG00000060068	fam98b	51	55.801	Danio_rerio
ENSCAPG00000013955	-	61	53.435	ENSDORG00000025449	-	82	49.194	Dipodomys_ordii
ENSCAPG00000013955	-	82	38.164	ENSEBUG00000014558	FAM98C	58	38.164	Eptatretus_burgeri
ENSCAPG00000013955	-	60	50.388	ENSEASG00005002574	-	85	45.968	Equus_asinus_asinus
ENSCAPG00000013955	-	87	64.894	ENSFCAG00000024944	FAM98A	51	58.228	Felis_catus
ENSCAPG00000013955	-	88	42.857	ENSFCAG00000000826	FAM98C	51	40.437	Felis_catus
ENSCAPG00000013955	-	85	79.670	ENSFALG00000005610	FAM98B	55	77.596	Ficedula_albicollis
ENSCAPG00000013955	-	96	93.407	ENSFDAG00000017475	FAM98B	53	93.407	Fukomys_damarensis
ENSCAPG00000013955	-	61	48.855	ENSFDAG00000011093	-	73	48.571	Fukomys_damarensis
ENSCAPG00000013955	-	88	58.201	ENSFHEG00000020445	fam98b	50	58.201	Fundulus_heteroclitus
ENSCAPG00000013955	-	73	42.308	ENSGMOG00000011664	-	59	35.678	Gadus_morhua
ENSCAPG00000013955	-	74	52.830	ENSGMOG00000009112	fam98b	52	52.830	Gadus_morhua
ENSCAPG00000013955	-	84	56.906	ENSGACG00000002316	fam98a	50	52.941	Gasterosteus_aculeatus
ENSCAPG00000013955	-	71	57.895	ENSGACG00000010534	fam98b	50	57.895	Gasterosteus_aculeatus
ENSCAPG00000013955	-	88	51.813	ENSGAGG00000016487	FAM98C	55	49.457	Gopherus_agassizii
ENSCAPG00000013955	-	88	40.314	ENSGGOG00000004470	FAM98C	51	38.251	Gorilla_gorilla
ENSCAPG00000013955	-	72	56.410	ENSHBUG00000000387	fam98a	80	56.410	Haplochromis_burtoni
ENSCAPG00000013955	-	96	94.505	ENSHGLG00000012275	FAM98B	50	94.505	Heterocephalus_glaber_female
ENSCAPG00000013955	-	61	47.445	ENSHGLG00000017864	-	74	47.619	Heterocephalus_glaber_female
ENSCAPG00000013955	-	61	47.445	ENSHGLG00100017695	-	74	47.619	Heterocephalus_glaber_male
ENSCAPG00000013955	-	96	94.505	ENSHGLG00100000123	FAM98B	50	94.505	Heterocephalus_glaber_male
ENSCAPG00000013955	-	96	91.209	ENSJJAG00000009039	Fam98b	58	91.209	Jaculus_jaculus
ENSCAPG00000013955	-	85	44.737	ENSLAFG00000020798	FAM98C	69	41.808	Loxodonta_africana
ENSCAPG00000013955	-	96	88.889	ENSLAFG00000008165	FAM98B	50	88.889	Loxodonta_africana
ENSCAPG00000013955	-	71	36.774	ENSMFAG00000031808	FAM98C	52	34.731	Macaca_fascicularis
ENSCAPG00000013955	-	88	41.361	ENSMMUG00000020468	FAM98C	90	39.344	Macaca_mulatta
ENSCAPG00000013955	-	88	41.361	ENSMNEG00000041959	FAM98C	51	39.344	Macaca_nemestrina
ENSCAPG00000013955	-	88	41.361	ENSMLEG00000042221	FAM98C	90	39.344	Mandrillus_leucophaeus
ENSCAPG00000013955	-	98	37.736	ENSMAMG00000009488	im:7138535	51	35.638	Mastacembelus_armatus
ENSCAPG00000013955	-	96	91.209	ENSMOCG00000019785	Fam98b	51	91.209	Microtus_ochrogaster
ENSCAPG00000013955	-	71	55.263	ENSMMOG00000009986	fam98b	50	55.263	Mola_mola
ENSCAPG00000013955	-	84	87.845	ENSMODG00000001159	FAM98B	53	87.912	Monodelphis_domestica
ENSCAPG00000013955	-	88	38.743	ENSMODG00000013175	-	75	36.066	Monodelphis_domestica
ENSCAPG00000013955	-	88	41.361	MGP_CAROLIEiJ_G0029473	Fam98c	74	48.571	Mus_caroli
ENSCAPG00000013955	-	88	41.361	ENSMUSG00000030590	Fam98c	74	48.571	Mus_musculus
ENSCAPG00000013955	-	87	65.426	ENSMUSG00000002017	Fam98a	51	59.236	Mus_musculus
ENSCAPG00000013955	-	88	41.361	MGP_PahariEiJ_G0012707	Fam98c	73	48.571	Mus_pahari
ENSCAPG00000013955	-	73	87.821	ENSMPUG00000008259	FAM98B	55	87.821	Mustela_putorius_furo
ENSCAPG00000013955	-	96	88.889	ENSMLUG00000009616	FAM98B	53	88.889	Myotis_lucifugus
ENSCAPG00000013955	-	96	90.659	ENSNGAG00000009974	Fam98b	50	90.659	Nannospalax_galili
ENSCAPG00000013955	-	88	39.487	ENSMEUG00000011451	FAM98C	54	37.778	Notamacropus_eugenii
ENSCAPG00000013955	-	61	48.905	ENSODEG00000015757	-	86	45.968	Octodon_degus
ENSCAPG00000013955	-	96	93.956	ENSODEG00000017000	-	54	93.956	Octodon_degus
ENSCAPG00000013955	-	84	39.779	ENSOCUG00000021073	-	83	38.636	Oryctolagus_cuniculus
ENSCAPG00000013955	-	85	62.088	ENSORLG00000012990	fam98b	50	62.088	Oryzias_latipes
ENSCAPG00000013955	-	85	62.637	ENSORLG00020017980	fam98b	50	62.637	Oryzias_latipes_hni
ENSCAPG00000013955	-	51	72.727	ENSORLG00015015703	-	76	72.727	Oryzias_latipes_hsok
ENSCAPG00000013955	-	58	68.548	ENSOMEG00000014478	-	73	68.548	Oryzias_melastigma
ENSCAPG00000013955	-	96	90.110	ENSOARG00000020035	FAM98B	54	90.110	Ovis_aries
ENSCAPG00000013955	-	88	40.838	ENSPPAG00000043372	FAM98C	51	38.798	Pan_paniscus
ENSCAPG00000013955	-	87	64.894	ENSPPRG00000002838	FAM98A	51	58.228	Panthera_pardus
ENSCAPG00000013955	-	82	88.889	ENSPPRG00000008882	FAM98B	58	88.889	Panthera_pardus
ENSCAPG00000013955	-	88	42.857	ENSPPRG00000010257	FAM98C	51	40.437	Panthera_pardus
ENSCAPG00000013955	-	87	64.894	ENSPTIG00000008201	FAM98A	51	58.228	Panthera_tigris_altaica
ENSCAPG00000013955	-	62	51.079	ENSPTIG00000015909	-	85	48.413	Panthera_tigris_altaica
ENSCAPG00000013955	-	85	90.110	ENSPTIG00000015746	FAM98B	58	88.889	Panthera_tigris_altaica
ENSCAPG00000013955	-	88	40.838	ENSPTRG00000010929	FAM98C	51	38.798	Pan_troglodytes
ENSCAPG00000013955	-	88	40.838	ENSPTRG00000049914	-	51	38.798	Pan_troglodytes
ENSCAPG00000013955	-	88	41.361	ENSPANG00000007584	FAM98C	51	39.344	Papio_anubis
ENSCAPG00000013955	-	87	57.447	ENSPKIG00000022087	FAM98B	59	56.354	Paramormyrops_kingsleyae
ENSCAPG00000013955	-	73	85.350	ENSPSIG00000006551	FAM98B	63	78.571	Pelodiscus_sinensis
ENSCAPG00000013955	-	71	55.195	ENSPMGG00000016693	fam98a	50	55.195	Periophthalmus_magnuspinnatus
ENSCAPG00000013955	-	87	55.155	ENSPMGG00000015340	fam98b	89	64.800	Periophthalmus_magnuspinnatus
ENSCAPG00000013955	-	61	49.242	ENSPEMG00000018935	-	74	48.571	Peromyscus_maniculatus_bairdii
ENSCAPG00000013955	-	79	51.149	ENSPMAG00000002346	fam98a	56	51.149	Petromyzon_marinus
ENSCAPG00000013955	-	85	60.440	ENSPREG00000007461	fam98b	50	59.890	Poecilia_reticulata
ENSCAPG00000013955	-	88	39.267	ENSPPYG00000009934	FAM98C	55	37.705	Pongo_abelii
ENSCAPG00000013955	-	87	64.894	ENSPCOG00000021155	FAM98A	52	58.282	Propithecus_coquereli
ENSCAPG00000013955	-	96	79.476	ENSPCOG00000025891	FAM98B	70	76.382	Propithecus_coquereli
ENSCAPG00000013955	-	94	40.000	ENSPNAG00000019766	im:7138535	50	37.766	Pygocentrus_nattereri
ENSCAPG00000013955	-	93	40.594	ENSRNOG00000024036	Fam98c	55	37.629	Rattus_norvegicus
ENSCAPG00000013955	-	88	41.361	ENSRBIG00000036368	-	65	38.889	Rhinopithecus_bieti
ENSCAPG00000013955	-	71	95.425	ENSRROG00000001210	-	61	95.425	Rhinopithecus_roxellana
ENSCAPG00000013955	-	88	41.361	ENSRROG00000017020	FAM98C	51	39.344	Rhinopithecus_roxellana
ENSCAPG00000013955	-	87	64.894	ENSSBOG00000034748	-	50	58.282	Saimiri_boliviensis_boliviensis
ENSCAPG00000013955	-	86	39.785	ENSSBOG00000034217	FAM98C	55	39.024	Saimiri_boliviensis_boliviensis
ENSCAPG00000013955	-	86	38.919	ENSSHAG00000002208	-	76	36.066	Sarcophilus_harrisii
ENSCAPG00000013955	-	85	62.088	ENSSDUG00000015289	fam98b	71	49.242	Seriola_dumerili
ENSCAPG00000013955	-	82	88.816	ENSSARG00000007404	FAM98B	65	88.816	Sorex_araneus
ENSCAPG00000013955	-	89	77.202	ENSSPUG00000019102	FAM98B	57	80.165	Sphenodon_punctatus
ENSCAPG00000013955	-	85	60.989	ENSTRUG00000013778	fam98b	50	60.989	Takifugu_rubripes
ENSCAPG00000013955	-	88	60.417	ENSTNIG00000017243	fam98b	51	60.440	Tetraodon_nigroviridis
ENSCAPG00000013955	-	73	54.140	ENSTNIG00000002436	-	65	55.921	Tetraodon_nigroviridis
ENSCAPG00000013955	-	82	90.132	ENSTBEG00000004576	FAM98B	59	90.132	Tupaia_belangeri
ENSCAPG00000013955	-	85	43.386	ENSTTRG00000010622	FAM98C	50	40.341	Tursiops_truncatus
ENSCAPG00000013955	-	85	90.659	ENSVPAG00000006604	FAM98B	50	90.659	Vicugna_pacos
ENSCAPG00000013955	-	61	51.825	ENSVVUG00000013061	-	85	49.194	Vulpes_vulpes
ENSCAPG00000013955	-	84	66.298	ENSXETG00000018061	fam98b	50	66.298	Xenopus_tropicalis