EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000014051 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Plus strand
Length
3206 bases
Position
chrAVPZ01000667.1:2987758-2990963
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000013433HGTP_anticodonPF03129.202.4e-1711
ENSCAPP00000013431HGTP_anticodonPF03129.203.5e-1711
ENSCAPP00000013433HGTP_anticodon2PF12745.71.8e-0811
ENSCAPP00000013431HGTP_anticodon2PF12745.72.6e-0811
ENSCAPP00000013431tRNA-synt_HisPF13393.64.1e-1011
ENSCAPP00000013433tRNA-synt_HisPF13393.61e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000017191-777-ENSCAPP00000013431258 (aa)--
ENSCAPT00000017193-657-ENSCAPP00000013433218 (aa)--
Gene Model
Click here to download ENSCAPG00000014051's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014051's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000014051-10079.279ENSCAPG00000017899HARS5779.279
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000014051-10078.378ENSG00000170445HARS5584.058Homo_sapiens
ENSCAPG00000014051-10074.775ENSAPOG00000002290hars5074.775Acanthochromis_polyacanthus
ENSCAPG00000014051-9990.991ENSAMEG00000010779HARS25190.991Ailuropoda_melanoleuca
ENSCAPG00000014051-10081.081ENSAMEG00000010837HARS5181.081Ailuropoda_melanoleuca
ENSCAPG00000014051-10072.881ENSACIG00000015362hars5672.881Amphilophus_citrinellus
ENSCAPG00000014051-10074.775ENSAOCG00000009021hars5074.775Amphiprion_ocellaris
ENSCAPG00000014051-10074.775ENSAPEG00000003586hars5074.775Amphiprion_percula
ENSCAPG00000014051-9974.775ENSATEG00000015770hars5074.775Anabas_testudineus
ENSCAPG00000014051-9980.180ENSAPLG00000013069-5780.180Anas_platyrhynchos
ENSCAPG00000014051-9776.577ENSAPLG00000013708-6376.577Anas_platyrhynchos
ENSCAPG00000014051-9875.676ENSACAG00000012768-5075.676Anolis_carolinensis
ENSCAPG00000014051-9993.694ENSANAG00000028635HARS25594.595Aotus_nancymaae
ENSCAPG00000014051-10079.279ENSANAG00000034093HARS5585.507Aotus_nancymaae
ENSCAPG00000014051-9971.186ENSACLG00000006420hars6958.276Astatotilapia_calliptera
ENSCAPG00000014051-9972.269ENSAMXG00000018719hars7156.610Astyanax_mexicanus
ENSCAPG00000014051-9991.892ENSBTAG00000025212HARS25191.892Bos_taurus
ENSCAPG00000014051-10079.279ENSBTAG00000018847HARS5179.279Bos_taurus
ENSCAPG00000014051-9993.694ENSCJAG00000016237HARS25594.595Callithrix_jacchus
ENSCAPG00000014051-10079.279ENSCJAG00000016282HARS5585.507Callithrix_jacchus
ENSCAPG00000014051-10078.378ENSCAFG00000005899HARS5178.378Canis_familiaris
ENSCAPG00000014051-9989.189ENSCAFG00000005905HARS25189.189Canis_familiaris
ENSCAPG00000014051-10070.748ENSCAFG00020000826-6267.181Canis_lupus_dingo
ENSCAPG00000014051-9989.189ENSCAFG00020000485HARS25289.189Canis_lupus_dingo
ENSCAPG00000014051-10078.378ENSCAFG00020000925-5178.378Canis_lupus_dingo
ENSCAPG00000014051-10079.279ENSCHIG00000018288HARS5179.279Capra_hircus
ENSCAPG00000014051-9991.892ENSCHIG00000009904HARS25191.892Capra_hircus
ENSCAPG00000014051-10080.180ENSTSYG00000001804HARS5586.957Carlito_syrichta
ENSCAPG00000014051-9987.387ENSTSYG00000001833HARS25684.932Carlito_syrichta
ENSCAPG00000014051-10079.279ENSCPOG00000009197HARS5179.279Cavia_porcellus
ENSCAPG00000014051-100100.000ENSCPOG00000009203HARS25398.165Cavia_porcellus
ENSCAPG00000014051-9992.793ENSCCAG00000010689HARS25594.595Cebus_capucinus
ENSCAPG00000014051-10079.279ENSCCAG00000024213HARS5885.507Cebus_capucinus
ENSCAPG00000014051-10078.378ENSCATG00000036942HARS5584.058Cercocebus_atys
ENSCAPG00000014051-9990.991ENSCATG00000034017HARS25594.595Cercocebus_atys
ENSCAPG00000014051-9993.220ENSCLAG00000012334HARS25393.220Chinchilla_lanigera
ENSCAPG00000014051-10080.180ENSCLAG00000012601HARS5180.180Chinchilla_lanigera
ENSCAPG00000014051-10078.378ENSCSAG00000012664HARS5178.378Chlorocebus_sabaeus
ENSCAPG00000014051-9991.892ENSCSAG00000012655HARS25191.892Chlorocebus_sabaeus
ENSCAPG00000014051-10081.081ENSCHOG00000007766HARS5181.081Choloepus_hoffmanni
ENSCAPG00000014051-9972.321ENSCPBG00000007708-5475.714Chrysemys_picta_bellii
ENSCAPG00000014051-9969.369ENSCSAVG00000010374-6369.369Ciona_savignyi
ENSCAPG00000014051-10078.378ENSCANG00000039898HARS5584.058Colobus_angolensis_palliatus
ENSCAPG00000014051-9992.793ENSCANG00000039830HARS25597.297Colobus_angolensis_palliatus
ENSCAPG00000014051-10080.180ENSCGRG00001003521Hars5180.180Cricetulus_griseus_chok1gshd
ENSCAPG00000014051-9992.793ENSCGRG00001011372Hars25192.793Cricetulus_griseus_chok1gshd
ENSCAPG00000014051-9992.793ENSCGRG00000013059Hars25192.793Cricetulus_griseus_crigri
ENSCAPG00000014051-10076.577ENSCGRG00000012736Hars5176.577Cricetulus_griseus_crigri
ENSCAPG00000014051-9974.775ENSCSEG00000001835hars5074.775Cynoglossus_semilaevis
ENSCAPG00000014051-9971.186ENSCVAG00000001911hars6068.750Cyprinodon_variegatus
ENSCAPG00000014051-9972.973ENSDARG00000003693hars5367.188Danio_rerio
ENSCAPG00000014051-10081.081ENSDNOG00000015147HARS5181.081Dasypus_novemcinctus
ENSCAPG00000014051-9980.180ENSDORG00000014553Hars5080.180Dipodomys_ordii
ENSCAPG00000014051-9996.396ENSDORG00000014555Hars25096.396Dipodomys_ordii
ENSCAPG00000014051-9990.090ENSETEG00000005403HARS25190.090Echinops_telfairi
ENSCAPG00000014051-9850.000ENSEBUG00000003733-7447.794Eptatretus_burgeri
ENSCAPG00000014051-10080.180ENSEASG00005017536HARS5180.180Equus_asinus_asinus
ENSCAPG00000014051-9991.892ENSEASG00005017563HARS25588.136Equus_asinus_asinus
ENSCAPG00000014051-10080.180ENSECAG00000021986HARS5180.180Equus_caballus
ENSCAPG00000014051-9990.991ENSECAG00000014461HARS25190.991Equus_caballus
ENSCAPG00000014051-9984.685ENSEEUG00000004539HARS25184.685Erinaceus_europaeus
ENSCAPG00000014051-9975.676ENSELUG00000002631hars5075.676Esox_lucius
ENSCAPG00000014051-9980.180ENSFCAG00000001286HARS5486.957Felis_catus
ENSCAPG00000014051-9990.991ENSFCAG00000001288HARS26085.616Felis_catus
ENSCAPG00000014051-9879.279ENSFALG00000008984-5179.279Ficedula_albicollis
ENSCAPG00000014051-9993.694ENSFDAG00000014553HARS25193.694Fukomys_damarensis
ENSCAPG00000014051-10079.279ENSFDAG00000006291HARS5179.279Fukomys_damarensis
ENSCAPG00000014051-9974.775ENSFHEG00000004792hars5074.775Fundulus_heteroclitus
ENSCAPG00000014051-9960.194ENSGMOG00000016134hars5160.194Gadus_morhua
ENSCAPG00000014051-9973.874ENSGALG00000029346-5073.874Gallus_gallus
ENSCAPG00000014051-9980.180ENSGALG00000035080HARS5180.180Gallus_gallus
ENSCAPG00000014051-9974.775ENSGAFG00000019599hars5074.775Gambusia_affinis
ENSCAPG00000014051-9973.267ENSGAGG00000017973-5472.321Gopherus_agassizii
ENSCAPG00000014051-9979.464ENSGAGG00000025389-5279.464Gopherus_agassizii
ENSCAPG00000014051-10078.378ENSGGOG00000025477-6478.378Gorilla_gorilla
ENSCAPG00000014051-9993.694ENSGGOG00000013177-5597.297Gorilla_gorilla
ENSCAPG00000014051-10078.378ENSGGOG00000013169-5584.058Gorilla_gorilla
ENSCAPG00000014051-5780.255ENSGGOG00000041947-6280.255Gorilla_gorilla
ENSCAPG00000014051-9971.186ENSHBUG00000002787hars5668.504Haplochromis_burtoni
ENSCAPG00000014051-10079.279ENSHGLG00000004453HARS5179.279Heterocephalus_glaber_female
ENSCAPG00000014051-9995.495ENSHGLG00000006165HARS25691.525Heterocephalus_glaber_female
ENSCAPG00000014051-9995.495ENSHGLG00100003090HARS25691.525Heterocephalus_glaber_male
ENSCAPG00000014051-10079.279ENSHGLG00100001831HARS5179.279Heterocephalus_glaber_male
ENSCAPG00000014051-10071.171ENSHCOG00000005282hars5071.171Hippocampus_comes
ENSCAPG00000014051-10074.775ENSIPUG00000010757hars5074.775Ictalurus_punctatus
ENSCAPG00000014051-9993.043ENSSTOG00000002016HARS25293.043Ictidomys_tridecemlineatus
ENSCAPG00000014051-10079.279ENSSTOG00000002007HARS5179.279Ictidomys_tridecemlineatus
ENSCAPG00000014051-10079.279ENSJJAG00000022965Hars5179.279Jaculus_jaculus
ENSCAPG00000014051-9994.595ENSJJAG00000014458Hars25194.595Jaculus_jaculus
ENSCAPG00000014051-9974.775ENSKMAG00000001608hars5074.775Kryptolebias_marmoratus
ENSCAPG00000014051-9747.706ENSLACG00000002711-5845.205Latimeria_chalumnae
ENSCAPG00000014051-10081.081ENSLAFG00000008163HARS5181.081Loxodonta_africana
ENSCAPG00000014051-9991.892ENSLAFG00000018600HARS25191.892Loxodonta_africana
ENSCAPG00000014051-9991.892ENSMFAG00000003090HARS25597.297Macaca_fascicularis
ENSCAPG00000014051-9978.378ENSMFAG00000002630HARS5484.058Macaca_fascicularis
ENSCAPG00000014051-10078.378ENSMMUG00000004481HARS5584.058Macaca_mulatta
ENSCAPG00000014051-9990.991ENSMMUG00000004483HARS25597.297Macaca_mulatta
ENSCAPG00000014051-10078.378ENSMNEG00000020918HARS5584.058Macaca_nemestrina
ENSCAPG00000014051-9991.892ENSMNEG00000040270HARS25497.297Macaca_nemestrina
ENSCAPG00000014051-10078.378ENSMLEG00000016289HARS5584.058Mandrillus_leucophaeus
ENSCAPG00000014051-9990.991ENSMLEG00000014240HARS25594.595Mandrillus_leucophaeus
ENSCAPG00000014051-10073.874ENSMAMG00000002252hars5373.874Mastacembelus_armatus
ENSCAPG00000014051-9971.186ENSMZEG00005017419hars5668.504Maylandia_zebra
ENSCAPG00000014051-9980.180ENSMGAG00000000853-5580.180Meleagris_gallopavo
ENSCAPG00000014051-9875.000ENSMGAG00000000847-6374.825Meleagris_gallopavo
ENSCAPG00000014051-9993.694ENSMAUG00000018784Hars25293.694Mesocricetus_auratus
ENSCAPG00000014051-9975.630ENSMICG00000014087HARS5679.221Microcebus_murinus
ENSCAPG00000014051-9989.189ENSMICG00000014100HARS25594.737Microcebus_murinus
ENSCAPG00000014051-10080.180ENSMOCG00000021826Hars5180.180Microtus_ochrogaster
ENSCAPG00000014051-9994.595ENSMOCG00000013944Hars25194.595Microtus_ochrogaster
ENSCAPG00000014051-9981.081ENSMODG00000011335HARS5081.081Monodelphis_domestica
ENSCAPG00000014051-9986.486ENSMODG00000011309HARS25186.486Monodelphis_domestica
ENSCAPG00000014051-9973.874ENSMALG00000000110hars5073.874Monopterus_albus
ENSCAPG00000014051-10092.793MGP_CAROLIEiJ_G0022139Hars25489.831Mus_caroli
ENSCAPG00000014051-10080.180MGP_CAROLIEiJ_G0022138Hars5180.180Mus_caroli
ENSCAPG00000014051-9989.831ENSMUSG00000019143Hars25389.831Mus_musculus
ENSCAPG00000014051-10080.180ENSMUSG00000001380Hars5180.180Mus_musculus
ENSCAPG00000014051-10080.180MGP_PahariEiJ_G0018872Hars5180.180Mus_pahari
ENSCAPG00000014051-9991.892MGP_PahariEiJ_G0018873Hars25191.892Mus_pahari
ENSCAPG00000014051-10080.180MGP_SPRETEiJ_G0023050Hars5180.180Mus_spretus
ENSCAPG00000014051-9989.831MGP_SPRETEiJ_G0023051Hars25389.831Mus_spretus
ENSCAPG00000014051-9990.090ENSMPUG00000008422HARS25190.090Mustela_putorius_furo
ENSCAPG00000014051-10080.180ENSMPUG00000008434HARS5180.180Mustela_putorius_furo
ENSCAPG00000014051-10079.279ENSMLUG00000003199-5179.279Myotis_lucifugus
ENSCAPG00000014051-6167.105ENSMLUG00000030018-5367.105Myotis_lucifugus
ENSCAPG00000014051-9989.583ENSMLUG00000017524HARS25089.583Myotis_lucifugus
ENSCAPG00000014051-8362.162ENSMLUG00000028009-6462.162Myotis_lucifugus
ENSCAPG00000014051-10078.378ENSNGAG00000019799Hars5178.378Nannospalax_galili
ENSCAPG00000014051-9996.396ENSNGAG00000000750Hars25196.396Nannospalax_galili
ENSCAPG00000014051-5663.194ENSNBRG00000007020hars5363.194Neolamprologus_brichardi
ENSCAPG00000014051-9992.793ENSNLEG00000009427HARS25597.297Nomascus_leucogenys
ENSCAPG00000014051-10078.378ENSNLEG00000009389HARS5584.058Nomascus_leucogenys
ENSCAPG00000014051-9977.119ENSMEUG00000001751HARS26073.973Notamacropus_eugenii
ENSCAPG00000014051-9985.417ENSODEG00000002558-6485.417Octodon_degus
ENSCAPG00000014051-10075.630ENSODEG00000005863-5871.429Octodon_degus
ENSCAPG00000014051-9895.652ENSODEG00000000572-5495.652Octodon_degus
ENSCAPG00000014051-10080.180ENSODEG00000002634-5180.180Octodon_degus
ENSCAPG00000014051-10071.186ENSONIG00000011548hars5368.504Oreochromis_niloticus
ENSCAPG00000014051-10069.231ENSOANG00000003035-5669.231Ornithorhynchus_anatinus
ENSCAPG00000014051-10080.180ENSOCUG00000004243HARS5180.180Oryctolagus_cuniculus
ENSCAPG00000014051-9990.991ENSOCUG00000004250HARS25190.991Oryctolagus_cuniculus
ENSCAPG00000014051-9972.034ENSORLG00000020605hars5369.291Oryzias_latipes
ENSCAPG00000014051-9972.034ENSORLG00020008391hars5369.291Oryzias_latipes_hni
ENSCAPG00000014051-9972.034ENSORLG00015017317hars5369.291Oryzias_latipes_hsok
ENSCAPG00000014051-9972.034ENSOMEG00000011434hars5369.291Oryzias_melastigma
ENSCAPG00000014051-10080.180ENSOGAG00000002050HARS5180.180Otolemur_garnettii
ENSCAPG00000014051-9989.189ENSOGAG00000002052HARS25189.189Otolemur_garnettii
ENSCAPG00000014051-10079.279ENSOARG00000018471HARS5179.279Ovis_aries
ENSCAPG00000014051-9993.694ENSPPAG00000039406HARS25597.297Pan_paniscus
ENSCAPG00000014051-10078.378ENSPPAG00000039715HARS5584.058Pan_paniscus
ENSCAPG00000014051-9980.180ENSPPRG00000008820HARS5486.957Panthera_pardus
ENSCAPG00000014051-9990.090ENSPPRG00000005394HARS26185.616Panthera_pardus
ENSCAPG00000014051-9989.189ENSPTIG00000007146HARS25989.189Panthera_tigris_altaica
ENSCAPG00000014051-9980.180ENSPTIG00000020494HARS5486.957Panthera_tigris_altaica
ENSCAPG00000014051-10078.378ENSPTRG00000017325HARS5584.058Pan_troglodytes
ENSCAPG00000014051-9993.694ENSPTRG00000017326HARS25597.297Pan_troglodytes
ENSCAPG00000014051-10078.378ENSPANG00000011928HARS5584.058Papio_anubis
ENSCAPG00000014051-9991.892ENSPANG00000011662HARS25597.297Papio_anubis
ENSCAPG00000014051-9878.571ENSPSIG00000004218-5178.571Pelodiscus_sinensis
ENSCAPG00000014051-9973.874ENSPMGG00000016218hars5073.874Periophthalmus_magnuspinnatus
ENSCAPG00000014051-9994.595ENSPEMG00000014993Hars25194.595Peromyscus_maniculatus_bairdii
ENSCAPG00000014051-10079.279ENSPEMG00000007577Hars5179.279Peromyscus_maniculatus_bairdii
ENSCAPG00000014051-5557.823ENSPMAG00000007025-9257.823Petromyzon_marinus
ENSCAPG00000014051-9980.180ENSPCIG00000017745HARS5580.180Phascolarctos_cinereus
ENSCAPG00000014051-9977.119ENSPCIG00000019291HARS27176.027Phascolarctos_cinereus
ENSCAPG00000014051-9974.775ENSPLAG00000002199hars5474.775Poecilia_latipinna
ENSCAPG00000014051-9974.775ENSPMEG00000020210hars5474.775Poecilia_mexicana
ENSCAPG00000014051-10074.790ENSPPYG00000015864HARS5772.789Pongo_abelii
ENSCAPG00000014051-9993.694ENSPPYG00000015865HARS25593.694Pongo_abelii
ENSCAPG00000014051-10078.378ENSPCAG00000001474HARS5178.378Procavia_capensis
ENSCAPG00000014051-9990.090ENSPCAG00000001548HARS25890.090Procavia_capensis
ENSCAPG00000014051-9991.892ENSPCOG00000022041HARS25594.737Propithecus_coquereli
ENSCAPG00000014051-9976.471ENSPCOG00000027592HARS5680.519Propithecus_coquereli
ENSCAPG00000014051-9978.378ENSPVAG00000009711HARS5078.378Pteropus_vampyrus
ENSCAPG00000014051-9990.991ENSPVAG00000009714HARS25190.991Pteropus_vampyrus
ENSCAPG00000014051-9971.186ENSPNYG00000017946hars5668.504Pundamilia_nyererei
ENSCAPG00000014051-9831.667ENSPNAG00000014650-5431.667Pygocentrus_nattereri
ENSCAPG00000014051-9975.676ENSPNAG00000013338hars7166.055Pygocentrus_nattereri
ENSCAPG00000014051-9992.793ENSRNOG00000016087Hars25192.793Rattus_norvegicus
ENSCAPG00000014051-10079.279ENSRNOG00000028105Hars5179.279Rattus_norvegicus
ENSCAPG00000014051-9992.793ENSRBIG00000036529HARS25597.297Rhinopithecus_bieti
ENSCAPG00000014051-10078.378ENSRBIG00000028934HARS5584.058Rhinopithecus_bieti
ENSCAPG00000014051-10078.378ENSRROG00000033541HARS5584.058Rhinopithecus_roxellana
ENSCAPG00000014051-9993.694ENSRROG00000036375HARS25597.297Rhinopithecus_roxellana
ENSCAPG00000014051-9993.694ENSSBOG00000032350HARS25594.595Saimiri_boliviensis_boliviensis
ENSCAPG00000014051-10079.279ENSSBOG00000020268HARS5585.507Saimiri_boliviensis_boliviensis
ENSCAPG00000014051-9981.081ENSSHAG00000016503HARS5181.081Sarcophilus_harrisii
ENSCAPG00000014051-9971.429ENSSFOG00015011741hars5369.291Scleropages_formosus
ENSCAPG00000014051-10074.775ENSSMAG00000014813hars5074.775Scophthalmus_maximus
ENSCAPG00000014051-10072.034ENSSDUG00000001088hars6169.291Seriola_dumerili
ENSCAPG00000014051-9970.339ENSSLDG00000007832hars5367.717Seriola_lalandi_dorsalis
ENSCAPG00000014051-9869.027ENSSPUG00000000266-5069.027Sphenodon_punctatus
ENSCAPG00000014051-9974.107ENSSPUG00000000279-5174.107Sphenodon_punctatus
ENSCAPG00000014051-10074.775ENSSPAG00000023522hars5074.775Stegastes_partitus
ENSCAPG00000014051-10079.279ENSSSCG00000014375HARS5179.279Sus_scrofa
ENSCAPG00000014051-9990.090ENSSSCG00000014376HARS25190.090Sus_scrofa
ENSCAPG00000014051-9979.279ENSTGUG00000001688-5179.279Taeniopygia_guttata
ENSCAPG00000014051-9973.874ENSTRUG00000009144hars5073.874Takifugu_rubripes
ENSCAPG00000014051-10073.874ENSTNIG00000004368hars5073.874Tetraodon_nigroviridis
ENSCAPG00000014051-9991.892ENSTTRG00000001771HARS25191.892Tursiops_truncatus
ENSCAPG00000014051-10074.150ENSTTRG00000001760HARS5074.150Tursiops_truncatus
ENSCAPG00000014051-9990.991ENSUAMG00000004656HARS25190.991Ursus_americanus
ENSCAPG00000014051-10081.081ENSUMAG00000012884HARS5081.081Ursus_maritimus
ENSCAPG00000014051-9990.991ENSUMAG00000012858HARS25190.991Ursus_maritimus
ENSCAPG00000014051-9989.189ENSVVUG00000015439HARS25189.189Vulpes_vulpes
ENSCAPG00000014051-10078.378ENSVVUG00000013620-5578.378Vulpes_vulpes
ENSCAPG00000014051-8672.072ENSXETG00000016115hars5172.072Xenopus_tropicalis
ENSCAPG00000014051-9977.679ENSXETG00000002665hars26577.679Xenopus_tropicalis
ENSCAPG00000014051-9974.775ENSXMAG00000010938hars5474.775Xiphophorus_maculatus

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