EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000014252 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 44469 bases
Position: chrAVPZ01000200.1:19153085-19197553
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000013710	MIF4G_like_2	PF09090.11	2.2e-68	1	1
ENSCAPP00000013706	MIF4G_like_2	PF09090.11	2.6e-68	1	1
ENSCAPP00000013712	MIF4G_like_2	PF09090.11	3.2e-68	1	1
ENSCAPP00000013712	MIF4G	PF02854.19	1.2e-24	1	1
ENSCAPP00000013706	MIF4G	PF02854.19	1.9e-24	1	1
ENSCAPP00000013710	MIF4G	PF02854.19	2.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000017470	NCBP1-201	2013	-	ENSCAPP00000013706	670 (aa)	-	-
ENSCAPT00000017476	NCBP1-203	1977	-	ENSCAPP00000013712	658 (aa)	-	-
ENSCAPT00000017474	NCBP1-202	1998	-	ENSCAPP00000013710	665 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000014252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014252	NCBP1	90	89.375	ENSG00000136937	NCBP1	81	89.531	Homo_sapiens
ENSCAPG00000014252	NCBP1	90	75.697	ENSAPOG00000008002	NCBP1	81	75.697	Acanthochromis_polyacanthus
ENSCAPG00000014252	NCBP1	90	89.062	ENSAMEG00000004763	NCBP1	81	89.219	Ailuropoda_melanoleuca
ENSCAPG00000014252	NCBP1	90	75.969	ENSACIG00000000274	NCBP1	81	75.969	Amphilophus_citrinellus
ENSCAPG00000014252	NCBP1	90	75.851	ENSAOCG00000021148	NCBP1	81	75.851	Amphiprion_ocellaris
ENSCAPG00000014252	NCBP1	90	75.851	ENSAPEG00000001701	NCBP1	81	75.851	Amphiprion_percula
ENSCAPG00000014252	NCBP1	90	75.387	ENSATEG00000006929	NCBP1	81	75.387	Anabas_testudineus
ENSCAPG00000014252	NCBP1	90	80.989	ENSAPLG00000016318	NCBP1	85	80.989	Anas_platyrhynchos
ENSCAPG00000014252	NCBP1	90	78.495	ENSACAG00000004409	NCBP1	71	78.495	Anolis_carolinensis
ENSCAPG00000014252	NCBP1	91	88.975	ENSANAG00000025744	NCBP1	89	89.130	Aotus_nancymaae
ENSCAPG00000014252	NCBP1	91	75.312	ENSACLG00000014812	NCBP1	89	76.094	Astatotilapia_calliptera
ENSCAPG00000014252	NCBP1	90	73.765	ENSAMXG00000016364	NCBP1	81	73.765	Astyanax_mexicanus
ENSCAPG00000014252	NCBP1	90	88.594	ENSBTAG00000009732	NCBP1	77	98.047	Bos_taurus
ENSCAPG00000014252	NCBP1	90	33.385	WBGene00018156	ncbp-1	80	32.921	Caenorhabditis_elegans
ENSCAPG00000014252	NCBP1	91	88.820	ENSCJAG00000010840	NCBP1	79	99.342	Callithrix_jacchus
ENSCAPG00000014252	NCBP1	90	89.219	ENSCAFG00000002445	NCBP1	81	89.375	Canis_familiaris
ENSCAPG00000014252	NCBP1	91	89.236	ENSCAFG00020017997	NCBP1	89	89.392	Canis_lupus_dingo
ENSCAPG00000014252	NCBP1	90	88.594	ENSCHIG00000020139	NCBP1	81	88.750	Capra_hircus
ENSCAPG00000014252	NCBP1	90	89.531	ENSCPOG00000012573	NCBP1	84	89.688	Cavia_porcellus
ENSCAPG00000014252	NCBP1	90	89.375	ENSCCAG00000032297	NCBP1	81	89.531	Cebus_capucinus
ENSCAPG00000014252	NCBP1	90	89.375	ENSCATG00000010052	NCBP1	89	89.314	Cercocebus_atys
ENSCAPG00000014252	NCBP1	90	89.531	ENSCLAG00000014339	NCBP1	81	89.688	Chinchilla_lanigera
ENSCAPG00000014252	NCBP1	90	89.375	ENSCSAG00000010929	NCBP1	81	89.531	Chlorocebus_sabaeus
ENSCAPG00000014252	NCBP1	79	81.250	ENSCHOG00000010332	NCBP1	71	75.676	Choloepus_hoffmanni
ENSCAPG00000014252	NCBP1	91	81.269	ENSCPBG00000024344	NCBP1	89	81.269	Chrysemys_picta_bellii
ENSCAPG00000014252	NCBP1	90	48.615	ENSCING00000008990	-	81	48.615	Ciona_intestinalis
ENSCAPG00000014252	NCBP1	90	48.206	ENSCSAVG00000005300	-	79	48.206	Ciona_savignyi
ENSCAPG00000014252	NCBP1	91	89.392	ENSCANG00000036913	NCBP1	89	89.548	Colobus_angolensis_palliatus
ENSCAPG00000014252	NCBP1	90	87.969	ENSCGRG00001015771	Ncbp1	81	88.125	Cricetulus_griseus_chok1gshd
ENSCAPG00000014252	NCBP1	90	87.969	ENSCGRG00000010311	Ncbp1	82	88.125	Cricetulus_griseus_crigri
ENSCAPG00000014252	NCBP1	91	75.583	ENSCSEG00000012377	NCBP1	90	75.583	Cynoglossus_semilaevis
ENSCAPG00000014252	NCBP1	90	72.643	ENSCVAG00000008795	NCBP1	81	74.034	Cyprinodon_variegatus
ENSCAPG00000014252	NCBP1	90	88.125	ENSDNOG00000006885	NCBP1	89	87.664	Dasypus_novemcinctus
ENSCAPG00000014252	NCBP1	91	87.752	ENSDORG00000013652	Ncbp1	83	87.907	Dipodomys_ordii
ENSCAPG00000014252	NCBP1	83	32.226	FBgn0038887	CG7907	77	32.226	Drosophila_melanogaster
ENSCAPG00000014252	NCBP1	90	52.174	FBgn0022942	Cbp80	81	52.174	Drosophila_melanogaster
ENSCAPG00000014252	NCBP1	77	77.604	ENSETEG00000009705	NCBP1	70	77.604	Echinops_telfairi
ENSCAPG00000014252	NCBP1	90	67.524	ENSEBUG00000008386	NCBP1	80	67.524	Eptatretus_burgeri
ENSCAPG00000014252	NCBP1	90	88.906	ENSEASG00005022795	NCBP1	81	89.062	Equus_asinus_asinus
ENSCAPG00000014252	NCBP1	90	89.062	ENSECAG00000013847	NCBP1	81	89.219	Equus_caballus
ENSCAPG00000014252	NCBP1	90	83.307	ENSEEUG00000015973	NCBP1	84	83.463	Erinaceus_europaeus
ENSCAPG00000014252	NCBP1	90	73.261	ENSELUG00000022519	NCBP1	84	74.652	Esox_lucius
ENSCAPG00000014252	NCBP1	90	89.062	ENSFCAG00000001206	NCBP1	81	89.219	Felis_catus
ENSCAPG00000014252	NCBP1	90	80.556	ENSFALG00000001193	NCBP1	82	80.710	Ficedula_albicollis
ENSCAPG00000014252	NCBP1	90	89.219	ENSFDAG00000010864	NCBP1	82	89.375	Fukomys_damarensis
ENSCAPG00000014252	NCBP1	90	74.034	ENSFHEG00000000655	NCBP1	81	74.034	Fundulus_heteroclitus
ENSCAPG00000014252	NCBP1	90	72.179	ENSGMOG00000008653	NCBP1	80	72.179	Gadus_morhua
ENSCAPG00000014252	NCBP1	90	81.747	ENSGALG00000002087	NCBP1	81	81.747	Gallus_gallus
ENSCAPG00000014252	NCBP1	90	76.220	ENSGAFG00000017787	NCBP1	81	76.220	Gambusia_affinis
ENSCAPG00000014252	NCBP1	90	74.537	ENSGACG00000016772	NCBP1	80	74.537	Gasterosteus_aculeatus
ENSCAPG00000014252	NCBP1	91	80.960	ENSGAGG00000019483	NCBP1	89	80.960	Gopherus_agassizii
ENSCAPG00000014252	NCBP1	91	88.975	ENSGGOG00000001376	NCBP1	89	89.130	Gorilla_gorilla
ENSCAPG00000014252	NCBP1	90	75.232	ENSHBUG00000020843	NCBP1	81	75.232	Haplochromis_burtoni
ENSCAPG00000014252	NCBP1	95	74.487	ENSHGLG00000018112	-	87	74.487	Heterocephalus_glaber_female
ENSCAPG00000014252	NCBP1	90	89.375	ENSHGLG00000001882	NCBP1	81	89.531	Heterocephalus_glaber_female
ENSCAPG00000014252	NCBP1	90	89.375	ENSHGLG00100013014	NCBP1	81	89.531	Heterocephalus_glaber_male
ENSCAPG00000014252	NCBP1	95	74.194	ENSHGLG00100017373	-	87	74.194	Heterocephalus_glaber_male
ENSCAPG00000014252	NCBP1	77	61.691	ENSHCOG00000000204	NCBP1	81	61.871	Hippocampus_comes
ENSCAPG00000014252	NCBP1	90	74.189	ENSIPUG00000007275	ncbp1	81	74.189	Ictalurus_punctatus
ENSCAPG00000014252	NCBP1	90	88.979	ENSSTOG00000002695	NCBP1	81	89.062	Ictidomys_tridecemlineatus
ENSCAPG00000014252	NCBP1	90	74.149	ENSKMAG00000003594	NCBP1	84	75.540	Kryptolebias_marmoratus
ENSCAPG00000014252	NCBP1	90	73.059	ENSLBEG00000011661	NCBP1	81	73.059	Labrus_bergylta
ENSCAPG00000014252	NCBP1	90	70.706	ENSLACG00000013955	NCBP1	81	70.706	Latimeria_chalumnae
ENSCAPG00000014252	NCBP1	90	61.774	ENSLOCG00000009579	NCBP1	81	61.774	Lepisosteus_oculatus
ENSCAPG00000014252	NCBP1	95	83.382	ENSLAFG00000005999	NCBP1	88	83.526	Loxodonta_africana
ENSCAPG00000014252	NCBP1	90	89.375	ENSMFAG00000030994	NCBP1	89	89.314	Macaca_fascicularis
ENSCAPG00000014252	NCBP1	90	89.375	ENSMMUG00000012281	NCBP1	89	89.314	Macaca_mulatta
ENSCAPG00000014252	NCBP1	90	89.375	ENSMNEG00000042790	NCBP1	81	89.531	Macaca_nemestrina
ENSCAPG00000014252	NCBP1	91	88.975	ENSMLEG00000030374	NCBP1	89	89.130	Mandrillus_leucophaeus
ENSCAPG00000014252	NCBP1	90	75.504	ENSMAMG00000014806	NCBP1	81	75.504	Mastacembelus_armatus
ENSCAPG00000014252	NCBP1	90	75.900	ENSMZEG00005009290	-	83	75.900	Maylandia_zebra
ENSCAPG00000014252	NCBP1	90	75.232	ENSMZEG00005003469	NCBP1	81	75.232	Maylandia_zebra
ENSCAPG00000014252	NCBP1	90	87.812	ENSMAUG00000020583	Ncbp1	81	87.969	Mesocricetus_auratus
ENSCAPG00000014252	NCBP1	90	88.906	ENSMICG00000012682	NCBP1	81	89.062	Microcebus_murinus
ENSCAPG00000014252	NCBP1	90	87.812	ENSMOCG00000015818	Ncbp1	81	87.969	Microtus_ochrogaster
ENSCAPG00000014252	NCBP1	90	75.430	ENSMMOG00000002610	NCBP1	89	75.430	Mola_mola
ENSCAPG00000014252	NCBP1	90	86.185	ENSMODG00000003202	NCBP1	80	86.185	Monodelphis_domestica
ENSCAPG00000014252	NCBP1	90	74.768	ENSMALG00000003547	NCBP1	81	74.768	Monopterus_albus
ENSCAPG00000014252	NCBP1	90	87.656	MGP_CAROLIEiJ_G0025982	Ncbp1	81	87.812	Mus_caroli
ENSCAPG00000014252	NCBP1	90	87.656	ENSMUSG00000028330	Ncbp1	81	87.812	Mus_musculus
ENSCAPG00000014252	NCBP1	90	87.812	MGP_PahariEiJ_G0028318	Ncbp1	81	87.969	Mus_pahari
ENSCAPG00000014252	NCBP1	90	87.656	MGP_SPRETEiJ_G0026945	Ncbp1	81	87.812	Mus_spretus
ENSCAPG00000014252	NCBP1	90	89.062	ENSMPUG00000006399	NCBP1	81	89.219	Mustela_putorius_furo
ENSCAPG00000014252	NCBP1	90	87.969	ENSMLUG00000015201	NCBP1	82	88.125	Myotis_lucifugus
ENSCAPG00000014252	NCBP1	90	88.125	ENSNGAG00000014101	Ncbp1	81	88.125	Nannospalax_galili
ENSCAPG00000014252	NCBP1	69	87.500	ENSNBRG00000014674	NCBP1	79	87.500	Neolamprologus_brichardi
ENSCAPG00000014252	NCBP1	91	88.975	ENSNLEG00000016909	NCBP1	89	89.314	Nomascus_leucogenys
ENSCAPG00000014252	NCBP1	79	90.278	ENSMEUG00000010672	NCBP1	72	90.278	Notamacropus_eugenii
ENSCAPG00000014252	NCBP1	77	85.870	ENSOPRG00000002144	-	73	86.051	Ochotona_princeps
ENSCAPG00000014252	NCBP1	90	89.627	ENSODEG00000003232	NCBP1	82	89.531	Octodon_degus
ENSCAPG00000014252	NCBP1	90	75.232	ENSONIG00000001502	NCBP1	81	75.232	Oreochromis_niloticus
ENSCAPG00000014252	NCBP1	80	88.014	ENSOANG00000001918	NCBP1	90	88.014	Ornithorhynchus_anatinus
ENSCAPG00000014252	NCBP1	90	88.906	ENSOCUG00000013853	NCBP1	80	89.062	Oryctolagus_cuniculus
ENSCAPG00000014252	NCBP1	90	73.438	ENSORLG00000011008	NCBP1	88	73.594	Oryzias_latipes
ENSCAPG00000014252	NCBP1	90	73.692	ENSORLG00020017455	NCBP1	88	70.938	Oryzias_latipes_hni
ENSCAPG00000014252	NCBP1	90	72.462	ENSORLG00015012127	NCBP1	81	73.846	Oryzias_latipes_hsok
ENSCAPG00000014252	NCBP1	90	72.727	ENSOMEG00000020698	NCBP1	81	74.114	Oryzias_melastigma
ENSCAPG00000014252	NCBP1	90	89.375	ENSOGAG00000013888	NCBP1	81	89.531	Otolemur_garnettii
ENSCAPG00000014252	NCBP1	90	88.594	ENSOARG00000011233	NCBP1	81	88.750	Ovis_aries
ENSCAPG00000014252	NCBP1	91	88.975	ENSPPAG00000026462	NCBP1	89	89.130	Pan_paniscus
ENSCAPG00000014252	NCBP1	90	89.219	ENSPPRG00000022574	NCBP1	81	89.375	Panthera_pardus
ENSCAPG00000014252	NCBP1	90	89.219	ENSPTIG00000018507	NCBP1	81	89.375	Panthera_tigris_altaica
ENSCAPG00000014252	NCBP1	90	89.375	ENSPTRG00000021167	NCBP1	81	89.531	Pan_troglodytes
ENSCAPG00000014252	NCBP1	91	88.975	ENSPANG00000025591	NCBP1	89	89.314	Papio_anubis
ENSCAPG00000014252	NCBP1	90	73.994	ENSPKIG00000015861	NCBP1	85	73.994	Paramormyrops_kingsleyae
ENSCAPG00000014252	NCBP1	59	75.744	ENSPSIG00000009558	NCBP1	85	75.973	Pelodiscus_sinensis
ENSCAPG00000014252	NCBP1	90	71.628	ENSPMGG00000020476	NCBP1	81	71.628	Periophthalmus_magnuspinnatus
ENSCAPG00000014252	NCBP1	90	87.969	ENSPEMG00000020105	Ncbp1	81	88.125	Peromyscus_maniculatus_bairdii
ENSCAPG00000014252	NCBP1	90	58.282	ENSPMAG00000005533	NCBP1	81	58.282	Petromyzon_marinus
ENSCAPG00000014252	NCBP1	90	88.799	ENSPCIG00000015800	NCBP1	78	91.447	Phascolarctos_cinereus
ENSCAPG00000014252	NCBP1	90	74.308	ENSPFOG00000004158	NCBP1	81	74.308	Poecilia_formosa
ENSCAPG00000014252	NCBP1	90	74.343	ENSPLAG00000020002	NCBP1	81	74.498	Poecilia_latipinna
ENSCAPG00000014252	NCBP1	90	74.189	ENSPMEG00000019821	NCBP1	81	74.343	Poecilia_mexicana
ENSCAPG00000014252	NCBP1	90	74.691	ENSPREG00000006035	NCBP1	81	75.000	Poecilia_reticulata
ENSCAPG00000014252	NCBP1	90	89.375	ENSPPYG00000019426	NCBP1	81	89.531	Pongo_abelii
ENSCAPG00000014252	NCBP1	80	98.828	ENSPCAG00000009943	NCBP1	68	98.828	Procavia_capensis
ENSCAPG00000014252	NCBP1	80	98.684	ENSPCOG00000020024	NCBP1	87	98.684	Propithecus_coquereli
ENSCAPG00000014252	NCBP1	90	88.594	ENSPVAG00000005924	NCBP1	81	88.750	Pteropus_vampyrus
ENSCAPG00000014252	NCBP1	91	75.312	ENSPNYG00000002140	NCBP1	89	76.094	Pundamilia_nyererei
ENSCAPG00000014252	NCBP1	91	75.000	ENSPNAG00000027753	NCBP1	89	74.846	Pygocentrus_nattereri
ENSCAPG00000014252	NCBP1	90	87.812	ENSRNOG00000023605	Ncbp1	81	87.969	Rattus_norvegicus
ENSCAPG00000014252	NCBP1	90	89.375	ENSRBIG00000043175	NCBP1	89	89.314	Rhinopithecus_bieti
ENSCAPG00000014252	NCBP1	91	88.975	ENSRROG00000029767	NCBP1	89	89.130	Rhinopithecus_roxellana
ENSCAPG00000014252	NCBP1	90	89.375	ENSSBOG00000019378	NCBP1	88	88.394	Saimiri_boliviensis_boliviensis
ENSCAPG00000014252	NCBP1	60	91.111	ENSSHAG00000015882	NCBP1	53	91.573	Sarcophilus_harrisii
ENSCAPG00000014252	NCBP1	90	73.709	ENSSFOG00015001872	NCBP1	82	73.709	Scleropages_formosus
ENSCAPG00000014252	NCBP1	90	74.458	ENSSMAG00000007463	NCBP1	81	74.458	Scophthalmus_maximus
ENSCAPG00000014252	NCBP1	90	75.469	ENSSDUG00000007019	NCBP1	89	75.077	Seriola_dumerili
ENSCAPG00000014252	NCBP1	90	74.923	ENSSLDG00000021924	NCBP1	81	74.923	Seriola_lalandi_dorsalis
ENSCAPG00000014252	NCBP1	67	96.000	ENSSARG00000007274	NCBP1	62	96.000	Sorex_araneus
ENSCAPG00000014252	NCBP1	90	70.625	ENSSPUG00000008609	NCBP1	80	70.625	Sphenodon_punctatus
ENSCAPG00000014252	NCBP1	90	75.697	ENSSPAG00000012550	NCBP1	81	75.697	Stegastes_partitus
ENSCAPG00000014252	NCBP1	90	89.062	ENSSSCG00000005366	NCBP1	81	89.219	Sus_scrofa
ENSCAPG00000014252	NCBP1	90	73.953	ENSTGUG00000001472	NCBP1	81	74.109	Taeniopygia_guttata
ENSCAPG00000014252	NCBP1	90	74.303	ENSTRUG00000005287	NCBP1	81	74.303	Takifugu_rubripes
ENSCAPG00000014252	NCBP1	90	87.656	ENSTBEG00000004035	NCBP1	81	87.812	Tupaia_belangeri
ENSCAPG00000014252	NCBP1	76	99.219	ENSTTRG00000000507	NCBP1	69	99.219	Tursiops_truncatus
ENSCAPG00000014252	NCBP1	90	89.375	ENSUAMG00000005471	NCBP1	81	89.531	Ursus_americanus
ENSCAPG00000014252	NCBP1	90	89.623	ENSUMAG00000011865	NCBP1	89	88.816	Ursus_maritimus
ENSCAPG00000014252	NCBP1	90	89.062	ENSVPAG00000010537	NCBP1	81	89.219	Vicugna_pacos
ENSCAPG00000014252	NCBP1	90	89.219	ENSVVUG00000019725	NCBP1	81	89.375	Vulpes_vulpes
ENSCAPG00000014252	NCBP1	90	71.495	ENSXETG00000010179	ncbp1	81	71.495	Xenopus_tropicalis
ENSCAPG00000014252	NCBP1	90	74.498	ENSXMAG00000018253	NCBP1	81	74.652	Xiphophorus_maculatus