EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000014483 (Gene tree)
Gene ID: -
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 63035 bases
Position: chrAVPZ01000478.1:912075-975109
Accession: 11503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014032	Exo_endo_phos	PF03372.23	3.1e-09	1	1
ENSCAPP00000014028	Exo_endo_phos	PF03372.23	3.1e-09	1	1
ENSCAPP00000014032	DUF1866	PF08952.11	5.5e-42	1	1
ENSCAPP00000014028	DUF1866	PF08952.11	6.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000017811	SYNJ1-203	1794	-	ENSCAPP00000014042	598 (aa)	-	-
ENSCAPT00000017797	SYNJ1-201	3894	-	ENSCAPP00000014028	1297 (aa)	-	-
ENSCAPT00000017801	SYNJ1-202	3864	-	ENSCAPP00000014032	1287 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000014483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000014483	SYNJ1	66	48.039	ENSCAPG00000000287	SYNJ2	77	48.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014483	SYNJ1	99	81.363	ENSG00000159082	SYNJ1	89	88.357	Homo_sapiens
ENSCAPG00000014483	SYNJ1	75	67.110	ENSAPOG00000002809	synj1	86	62.884	Acanthochromis_polyacanthus
ENSCAPG00000014483	SYNJ1	99	77.742	ENSAMEG00000015028	SYNJ1	95	72.881	Ailuropoda_melanoleuca
ENSCAPG00000014483	SYNJ1	73	82.234	ENSACIG00000008857	synj1	71	82.234	Amphilophus_citrinellus
ENSCAPG00000014483	SYNJ1	75	66.920	ENSAOCG00000009835	synj1	91	60.081	Amphiprion_ocellaris
ENSCAPG00000014483	SYNJ1	75	66.256	ENSAPEG00000021010	synj1	68	64.267	Amphiprion_percula
ENSCAPG00000014483	SYNJ1	75	72.519	ENSATEG00000002306	synj1	71	72.519	Anabas_testudineus
ENSCAPG00000014483	SYNJ1	83	71.983	ENSAPLG00000011832	SYNJ1	76	73.610	Anas_platyrhynchos
ENSCAPG00000014483	SYNJ1	83	71.213	ENSACAG00000003006	-	95	70.000	Anolis_carolinensis
ENSCAPG00000014483	SYNJ1	99	80.574	ENSANAG00000027325	SYNJ1	97	76.559	Aotus_nancymaae
ENSCAPG00000014483	SYNJ1	75	71.815	ENSACLG00000002255	synj1	86	62.777	Astatotilapia_calliptera
ENSCAPG00000014483	SYNJ1	88	66.952	ENSAMXG00000008208	synj1	78	64.280	Astyanax_mexicanus
ENSCAPG00000014483	SYNJ1	99	80.168	ENSBTAG00000003063	SYNJ1	92	80.151	Bos_taurus
ENSCAPG00000014483	SYNJ1	99	81.399	ENSCJAG00000009187	SYNJ1	97	76.475	Callithrix_jacchus
ENSCAPG00000014483	SYNJ1	99	78.947	ENSCAFG00000009041	SYNJ1	95	77.695	Canis_familiaris
ENSCAPG00000014483	SYNJ1	99	81.373	ENSCAFG00020025776	SYNJ1	96	76.289	Canis_lupus_dingo
ENSCAPG00000014483	SYNJ1	99	80.911	ENSCHIG00000005095	SYNJ1	95	77.419	Capra_hircus
ENSCAPG00000014483	SYNJ1	99	81.255	ENSTSYG00000014541	SYNJ1	97	77.093	Carlito_syrichta
ENSCAPG00000014483	SYNJ1	99	96.491	ENSCPOG00000012182	SYNJ1	94	96.491	Cavia_porcellus
ENSCAPG00000014483	SYNJ1	99	80.776	ENSCCAG00000020825	SYNJ1	97	76.559	Cebus_capucinus
ENSCAPG00000014483	SYNJ1	99	81.920	ENSCATG00000033891	SYNJ1	97	77.095	Cercocebus_atys
ENSCAPG00000014483	SYNJ1	99	81.271	ENSCLAG00000009796	SYNJ1	89	88.836	Chinchilla_lanigera
ENSCAPG00000014483	SYNJ1	83	79.950	ENSCSAG00000009654	SYNJ1	95	77.706	Chlorocebus_sabaeus
ENSCAPG00000014483	SYNJ1	91	79.153	ENSCHOG00000012390	SYNJ1	83	79.153	Choloepus_hoffmanni
ENSCAPG00000014483	SYNJ1	83	77.055	ENSCPBG00000006402	SYNJ1	93	76.712	Chrysemys_picta_bellii
ENSCAPG00000014483	SYNJ1	99	83.491	ENSCANG00000031359	SYNJ1	97	76.060	Colobus_angolensis_palliatus
ENSCAPG00000014483	SYNJ1	99	79.553	ENSCGRG00001010861	Synj1	97	74.883	Cricetulus_griseus_chok1gshd
ENSCAPG00000014483	SYNJ1	84	78.351	ENSCGRG00000015749	Synj1	89	87.241	Cricetulus_griseus_crigri
ENSCAPG00000014483	SYNJ1	75	67.015	ENSCSEG00000019614	synj1	95	62.158	Cynoglossus_semilaevis
ENSCAPG00000014483	SYNJ1	75	72.137	ENSCVAG00000019250	synj1	84	72.137	Cyprinodon_variegatus
ENSCAPG00000014483	SYNJ1	76	67.477	ENSDARG00000025011	synj1	91	63.748	Danio_rerio
ENSCAPG00000014483	SYNJ1	99	73.754	ENSDNOG00000010732	SYNJ1	94	71.904	Dasypus_novemcinctus
ENSCAPG00000014483	SYNJ1	76	94.872	ENSETEG00000018674	SYNJ1	70	94.872	Echinops_telfairi
ENSCAPG00000014483	SYNJ1	99	79.684	ENSEASG00005006287	SYNJ1	94	84.855	Equus_asinus_asinus
ENSCAPG00000014483	SYNJ1	99	83.114	ENSECAG00000004829	SYNJ1	97	77.102	Equus_caballus
ENSCAPG00000014483	SYNJ1	94	79.174	ENSEEUG00000005150	SYNJ1	94	78.987	Erinaceus_europaeus
ENSCAPG00000014483	SYNJ1	75	82.883	ENSELUG00000009731	synj1	74	82.883	Esox_lucius
ENSCAPG00000014483	SYNJ1	99	81.104	ENSFCAG00000012498	SYNJ1	95	77.298	Felis_catus
ENSCAPG00000014483	SYNJ1	74	73.969	ENSFALG00000004680	SYNJ1	91	70.199	Ficedula_albicollis
ENSCAPG00000014483	SYNJ1	85	79.542	ENSFDAG00000016818	SYNJ1	89	88.357	Fukomys_damarensis
ENSCAPG00000014483	SYNJ1	75	66.635	ENSFHEG00000017689	synj1	76	61.026	Fundulus_heteroclitus
ENSCAPG00000014483	SYNJ1	66	67.802	ENSGMOG00000014852	synj1	70	67.644	Gadus_morhua
ENSCAPG00000014483	SYNJ1	99	74.658	ENSGALG00000034317	SYNJ1	90	74.978	Gallus_gallus
ENSCAPG00000014483	SYNJ1	75	65.501	ENSGAFG00000019466	synj1	74	61.365	Gambusia_affinis
ENSCAPG00000014483	SYNJ1	74	63.662	ENSGACG00000020575	synj1	86	62.051	Gasterosteus_aculeatus
ENSCAPG00000014483	SYNJ1	99	76.276	ENSGAGG00000022523	SYNJ1	96	71.518	Gopherus_agassizii
ENSCAPG00000014483	SYNJ1	99	79.866	ENSGGOG00000015945	SYNJ1	97	77.182	Gorilla_gorilla
ENSCAPG00000014483	SYNJ1	75	71.815	ENSHBUG00000007774	synj1	95	59.923	Haplochromis_burtoni
ENSCAPG00000014483	SYNJ1	99	80.769	ENSHGLG00000006420	SYNJ1	89	88.357	Heterocephalus_glaber_female
ENSCAPG00000014483	SYNJ1	99	80.769	ENSHGLG00100012591	SYNJ1	89	88.357	Heterocephalus_glaber_male
ENSCAPG00000014483	SYNJ1	77	60.236	ENSHCOG00000012774	synj1	81	63.628	Hippocampus_comes
ENSCAPG00000014483	SYNJ1	75	66.919	ENSIPUG00000010691	SYNJ1	76	62.841	Ictalurus_punctatus
ENSCAPG00000014483	SYNJ1	99	80.686	ENSSTOG00000015806	SYNJ1	97	77.061	Ictidomys_tridecemlineatus
ENSCAPG00000014483	SYNJ1	99	72.750	ENSJJAG00000020168	Synj1	93	71.366	Jaculus_jaculus
ENSCAPG00000014483	SYNJ1	75	66.257	ENSKMAG00000004221	synj1	84	67.380	Kryptolebias_marmoratus
ENSCAPG00000014483	SYNJ1	73	82.432	ENSLBEG00000015081	synj1	80	82.432	Labrus_bergylta
ENSCAPG00000014483	SYNJ1	92	72.227	ENSLACG00000005928	SYNJ1	86	70.931	Latimeria_chalumnae
ENSCAPG00000014483	SYNJ1	94	66.031	ENSLOCG00000009230	synj1	91	65.372	Lepisosteus_oculatus
ENSCAPG00000014483	SYNJ1	97	78.158	ENSLAFG00000011806	SYNJ1	97	73.698	Loxodonta_africana
ENSCAPG00000014483	SYNJ1	99	80.932	ENSMFAG00000018883	SYNJ1	99	76.109	Macaca_fascicularis
ENSCAPG00000014483	SYNJ1	99	79.950	ENSMMUG00000004624	SYNJ1	97	76.090	Macaca_mulatta
ENSCAPG00000014483	SYNJ1	99	81.834	ENSMNEG00000040077	SYNJ1	96	76.206	Macaca_nemestrina
ENSCAPG00000014483	SYNJ1	99	81.834	ENSMLEG00000037029	SYNJ1	97	76.517	Mandrillus_leucophaeus
ENSCAPG00000014483	SYNJ1	75	81.333	ENSMAMG00000013404	synj1	69	81.333	Mastacembelus_armatus
ENSCAPG00000014483	SYNJ1	75	66.160	ENSMZEG00005024358	synj1	86	64.500	Maylandia_zebra
ENSCAPG00000014483	SYNJ1	99	74.381	ENSMGAG00000014522	SYNJ1	88	74.892	Meleagris_gallopavo
ENSCAPG00000014483	SYNJ1	84	78.351	ENSMAUG00000009743	Synj1	89	87.081	Mesocricetus_auratus
ENSCAPG00000014483	SYNJ1	99	80.932	ENSMICG00000034953	SYNJ1	95	78.189	Microcebus_murinus
ENSCAPG00000014483	SYNJ1	79	63.790	ENSMMOG00000010203	synj1	82	66.890	Mola_mola
ENSCAPG00000014483	SYNJ1	84	69.020	ENSMODG00000021073	SYNJ1	95	66.746	Monodelphis_domestica
ENSCAPG00000014483	SYNJ1	75	72.519	ENSMALG00000014015	synj1	75	72.519	Monopterus_albus
ENSCAPG00000014483	SYNJ1	99	78.613	MGP_CAROLIEiJ_G0020951	Synj1	89	87.400	Mus_caroli
ENSCAPG00000014483	SYNJ1	99	77.085	ENSMUSG00000022973	Synj1	89	87.879	Mus_musculus
ENSCAPG00000014483	SYNJ1	99	77.409	MGP_PahariEiJ_G0016656	Synj1	89	88.038	Mus_pahari
ENSCAPG00000014483	SYNJ1	99	77.085	MGP_SPRETEiJ_G0021857	Synj1	89	87.879	Mus_spretus
ENSCAPG00000014483	SYNJ1	99	79.066	ENSMPUG00000001153	SYNJ1	97	73.259	Mustela_putorius_furo
ENSCAPG00000014483	SYNJ1	59	76.198	ENSMLUG00000005764	-	97	66.208	Myotis_lucifugus
ENSCAPG00000014483	SYNJ1	83	79.681	ENSNGAG00000000453	Synj1	89	87.879	Nannospalax_galili
ENSCAPG00000014483	SYNJ1	75	72.201	ENSNBRG00000011936	synj1	74	72.137	Neolamprologus_brichardi
ENSCAPG00000014483	SYNJ1	83	81.890	ENSNLEG00000003734	SYNJ1	89	75.755	Nomascus_leucogenys
ENSCAPG00000014483	SYNJ1	69	87.500	ENSMEUG00000004158	-	65	87.500	Notamacropus_eugenii
ENSCAPG00000014483	SYNJ1	92	82.413	ENSOPRG00000013602	SYNJ1	84	82.413	Ochotona_princeps
ENSCAPG00000014483	SYNJ1	75	66.036	ENSONIG00000004667	synj1	83	62.185	Oreochromis_niloticus
ENSCAPG00000014483	SYNJ1	97	74.771	ENSOANG00000006929	SYNJ1	97	71.406	Ornithorhynchus_anatinus
ENSCAPG00000014483	SYNJ1	99	76.466	ENSOCUG00000001420	SYNJ1	94	74.757	Oryctolagus_cuniculus
ENSCAPG00000014483	SYNJ1	75	65.941	ENSORLG00000004320	synj1	93	60.658	Oryzias_latipes
ENSCAPG00000014483	SYNJ1	75	64.057	ENSORLG00020011994	synj1	79	64.407	Oryzias_latipes_hni
ENSCAPG00000014483	SYNJ1	75	65.849	ENSORLG00015018077	synj1	67	64.164	Oryzias_latipes_hsok
ENSCAPG00000014483	SYNJ1	75	81.982	ENSOMEG00000014322	synj1	80	81.982	Oryzias_melastigma
ENSCAPG00000014483	SYNJ1	99	75.839	ENSOGAG00000006010	SYNJ1	91	73.857	Otolemur_garnettii
ENSCAPG00000014483	SYNJ1	99	78.649	ENSOARG00000013414	SYNJ1	94	74.233	Ovis_aries
ENSCAPG00000014483	SYNJ1	99	81.450	ENSPPAG00000026784	SYNJ1	97	76.698	Pan_paniscus
ENSCAPG00000014483	SYNJ1	99	81.018	ENSPPRG00000023469	SYNJ1	95	77.218	Panthera_pardus
ENSCAPG00000014483	SYNJ1	99	81.018	ENSPTIG00000007930	SYNJ1	95	77.218	Panthera_tigris_altaica
ENSCAPG00000014483	SYNJ1	99	82.519	ENSPTRG00000048135	-	97	77.262	Pan_troglodytes
ENSCAPG00000014483	SYNJ1	99	80.034	ENSPTRG00000023787	SYNJ1	97	77.262	Pan_troglodytes
ENSCAPG00000014483	SYNJ1	99	81.920	ENSPANG00000022531	SYNJ1	97	76.190	Papio_anubis
ENSCAPG00000014483	SYNJ1	75	68.709	ENSPKIG00000022603	synj1	86	68.803	Paramormyrops_kingsleyae
ENSCAPG00000014483	SYNJ1	75	81.982	ENSPMGG00000016831	synj1	85	81.982	Periophthalmus_magnuspinnatus
ENSCAPG00000014483	SYNJ1	84	78.601	ENSPEMG00000018767	Synj1	89	87.081	Peromyscus_maniculatus_bairdii
ENSCAPG00000014483	SYNJ1	69	54.697	ENSPMAG00000002887	synj1	77	52.524	Petromyzon_marinus
ENSCAPG00000014483	SYNJ1	99	76.105	ENSPCIG00000016372	SYNJ1	96	72.236	Phascolarctos_cinereus
ENSCAPG00000014483	SYNJ1	75	66.477	ENSPFOG00000016886	synj1	93	60.270	Poecilia_formosa
ENSCAPG00000014483	SYNJ1	75	73.282	ENSPLAG00000017559	synj1	90	73.282	Poecilia_latipinna
ENSCAPG00000014483	SYNJ1	75	73.282	ENSPMEG00000007643	synj1	74	73.282	Poecilia_mexicana
ENSCAPG00000014483	SYNJ1	75	66.635	ENSPREG00000012412	synj1	92	59.855	Poecilia_reticulata
ENSCAPG00000014483	SYNJ1	83	79.816	ENSPPYG00000011365	SYNJ1	91	76.072	Pongo_abelii
ENSCAPG00000014483	SYNJ1	72	89.655	ENSPCAG00000009906	SYNJ1	67	89.655	Procavia_capensis
ENSCAPG00000014483	SYNJ1	92	80.692	ENSPCOG00000024841	SYNJ1	90	80.692	Propithecus_coquereli
ENSCAPG00000014483	SYNJ1	99	73.490	ENSPVAG00000000892	SYNJ1	94	72.516	Pteropus_vampyrus
ENSCAPG00000014483	SYNJ1	75	71.815	ENSPNYG00000022989	synj1	95	59.937	Pundamilia_nyererei
ENSCAPG00000014483	SYNJ1	76	66.449	ENSPNAG00000021119	synj1	87	67.104	Pygocentrus_nattereri
ENSCAPG00000014483	SYNJ1	99	79.114	ENSRNOG00000002051	Synj1	97	75.810	Rattus_norvegicus
ENSCAPG00000014483	SYNJ1	99	81.450	ENSRBIG00000034477	SYNJ1	97	76.522	Rhinopithecus_bieti
ENSCAPG00000014483	SYNJ1	99	83.679	ENSRROG00000039256	SYNJ1	99	75.834	Rhinopithecus_roxellana
ENSCAPG00000014483	SYNJ1	99	81.399	ENSSBOG00000021001	SYNJ1	95	77.859	Saimiri_boliviensis_boliviensis
ENSCAPG00000014483	SYNJ1	99	72.757	ENSSHAG00000008538	SYNJ1	93	72.253	Sarcophilus_harrisii
ENSCAPG00000014483	SYNJ1	95	67.884	ENSSFOG00015006095	synj1	79	66.038	Scleropages_formosus
ENSCAPG00000014483	SYNJ1	79	82.883	ENSSMAG00000018066	synj1	83	82.883	Scophthalmus_maximus
ENSCAPG00000014483	SYNJ1	75	66.038	ENSSDUG00000013058	synj1	68	64.249	Seriola_dumerili
ENSCAPG00000014483	SYNJ1	75	66.698	ENSSLDG00000021406	synj1	86	64.756	Seriola_lalandi_dorsalis
ENSCAPG00000014483	SYNJ1	71	89.552	ENSSARG00000009490	SYNJ1	74	89.552	Sorex_araneus
ENSCAPG00000014483	SYNJ1	96	76.207	ENSSPUG00000012552	SYNJ1	94	72.720	Sphenodon_punctatus
ENSCAPG00000014483	SYNJ1	72	83.684	ENSSPAG00000006812	SYNJ1	65	83.684	Stegastes_partitus
ENSCAPG00000014483	SYNJ1	76	83.333	ENSSPAG00000017029	synj1	80	83.333	Stegastes_partitus
ENSCAPG00000014483	SYNJ1	99	76.778	ENSSSCG00000012035	SYNJ1	96	76.179	Sus_scrofa
ENSCAPG00000014483	SYNJ1	99	69.180	ENSTGUG00000013445	SYNJ1	90	70.740	Taeniopygia_guttata
ENSCAPG00000014483	SYNJ1	79	63.571	ENSTRUG00000006907	synj1	84	61.737	Takifugu_rubripes
ENSCAPG00000014483	SYNJ1	76	71.536	ENSTNIG00000009940	synj1	85	58.644	Tetraodon_nigroviridis
ENSCAPG00000014483	SYNJ1	86	91.393	ENSTBEG00000016298	SYNJ1	81	91.393	Tupaia_belangeri
ENSCAPG00000014483	SYNJ1	96	84.457	ENSTTRG00000002222	SYNJ1	88	84.457	Tursiops_truncatus
ENSCAPG00000014483	SYNJ1	99	78.293	ENSUAMG00000018606	SYNJ1	99	84.061	Ursus_americanus
ENSCAPG00000014483	SYNJ1	99	82.973	ENSUMAG00000018419	SYNJ1	99	84.061	Ursus_maritimus
ENSCAPG00000014483	SYNJ1	90	96.552	ENSVPAG00000001241	SYNJ1	67	96.552	Vicugna_pacos
ENSCAPG00000014483	SYNJ1	99	82.552	ENSVVUG00000023125	SYNJ1	98	76.289	Vulpes_vulpes
ENSCAPG00000014483	SYNJ1	99	67.301	ENSXETG00000009899	synj1	93	64.770	Xenopus_tropicalis
ENSCAPG00000014483	SYNJ1	75	72.901	ENSXCOG00000011896	synj1	92	59.535	Xiphophorus_couchianus
ENSCAPG00000014483	SYNJ1	81	73.282	ENSXMAG00000017524	synj1	90	73.282	Xiphophorus_maculatus