EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000014534 (Gene tree)
Gene ID: -
Gene Symbol: LSM7
Alias: YNL147W
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1136 bases
Position: chrAVPZ01000540.1:24464-25599
Accession: 20470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014057	LSM	PF01423.22	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000017826	LSM7-201	216	-	ENSCAPP00000014057	71 (aa)	-	UPI0000202FD9

Gene Model

Click here to download ENSCAPG00000014534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014534	LSM7	100	100.000	ENSG00000130332	LSM7	100	100.000	Homo_sapiens
ENSCAPG00000014534	LSM7	90	96.875	ENSAPOG00000015573	lsm7	55	96.875	Acanthochromis_polyacanthus
ENSCAPG00000014534	LSM7	100	98.592	ENSAMEG00000005484	LSM7	69	98.592	Ailuropoda_melanoleuca
ENSCAPG00000014534	LSM7	94	97.015	ENSACIG00000006498	lsm7	53	97.015	Amphilophus_citrinellus
ENSCAPG00000014534	LSM7	100	95.775	ENSAOCG00000001077	lsm7	65	95.775	Amphiprion_ocellaris
ENSCAPG00000014534	LSM7	100	95.775	ENSAPEG00000024447	lsm7	65	95.775	Amphiprion_percula
ENSCAPG00000014534	LSM7	100	95.775	ENSAPEG00000000694	lsm7	69	95.775	Amphiprion_percula
ENSCAPG00000014534	LSM7	100	95.775	ENSATEG00000008557	lsm7	69	95.775	Anabas_testudineus
ENSCAPG00000014534	LSM7	100	87.324	ENSANAG00000022222	-	67	87.324	Aotus_nancymaae
ENSCAPG00000014534	LSM7	100	100.000	ENSANAG00000037196	-	69	100.000	Aotus_nancymaae
ENSCAPG00000014534	LSM7	100	95.775	ENSACLG00000021021	lsm7	69	95.775	Astatotilapia_calliptera
ENSCAPG00000014534	LSM7	100	95.775	ENSAMXG00000037622	lsm7	69	95.775	Astyanax_mexicanus
ENSCAPG00000014534	LSM7	100	100.000	ENSBTAG00000004521	LSM7	69	100.000	Bos_taurus
ENSCAPG00000014534	LSM7	99	52.857	WBGene00003081	lsm-7	67	52.857	Caenorhabditis_elegans
ENSCAPG00000014534	LSM7	100	98.592	ENSCAFG00000019409	LSM7	69	98.592	Canis_familiaris
ENSCAPG00000014534	LSM7	100	98.592	ENSCAFG00020018168	LSM7	52	98.592	Canis_lupus_dingo
ENSCAPG00000014534	LSM7	100	100.000	ENSCHIG00000023663	LSM7	69	100.000	Capra_hircus
ENSCAPG00000014534	LSM7	100	100.000	ENSCPOG00000014025	LSM7	70	100.000	Cavia_porcellus
ENSCAPG00000014534	LSM7	100	100.000	ENSCCAG00000035456	LSM7	70	100.000	Cebus_capucinus
ENSCAPG00000014534	LSM7	100	100.000	ENSCATG00000023543	LSM7	69	100.000	Cercocebus_atys
ENSCAPG00000014534	LSM7	100	100.000	ENSCLAG00000011635	LSM7	69	100.000	Chinchilla_lanigera
ENSCAPG00000014534	LSM7	100	100.000	ENSCSAG00000011599	LSM7	69	100.000	Chlorocebus_sabaeus
ENSCAPG00000014534	LSM7	100	95.775	ENSCPBG00000021317	LSM7	76	95.775	Chrysemys_picta_bellii
ENSCAPG00000014534	LSM7	96	80.882	ENSCING00000022134	-	69	80.882	Ciona_intestinalis
ENSCAPG00000014534	LSM7	100	100.000	ENSCANG00000035525	LSM7	69	100.000	Colobus_angolensis_palliatus
ENSCAPG00000014534	LSM7	85	88.333	ENSCGRG00001016005	-	60	88.333	Cricetulus_griseus_chok1gshd
ENSCAPG00000014534	LSM7	100	98.592	ENSCGRG00001000807	-	69	98.592	Cricetulus_griseus_chok1gshd
ENSCAPG00000014534	LSM7	85	88.333	ENSCGRG00000006821	-	60	88.333	Cricetulus_griseus_crigri
ENSCAPG00000014534	LSM7	100	98.592	ENSCGRG00000014355	-	68	98.592	Cricetulus_griseus_crigri
ENSCAPG00000014534	LSM7	100	95.775	ENSCSEG00000014900	lsm7	60	95.775	Cynoglossus_semilaevis
ENSCAPG00000014534	LSM7	100	95.775	ENSCVAG00000021091	lsm7	66	95.775	Cyprinodon_variegatus
ENSCAPG00000014534	LSM7	100	97.183	ENSDARG00000058328	lsm7	69	97.183	Danio_rerio
ENSCAPG00000014534	LSM7	100	97.183	ENSDORG00000024460	Lsm7	70	97.183	Dipodomys_ordii
ENSCAPG00000014534	LSM7	96	75.362	FBgn0261068	LSm7	63	75.362	Drosophila_melanogaster
ENSCAPG00000014534	LSM7	100	98.592	ENSETEG00000012788	LSM7	70	98.592	Echinops_telfairi
ENSCAPG00000014534	LSM7	100	85.915	ENSEBUG00000016992	lsm7	68	85.915	Eptatretus_burgeri
ENSCAPG00000014534	LSM7	92	61.538	ENSEBUG00000010470	-	61	61.538	Eptatretus_burgeri
ENSCAPG00000014534	LSM7	100	98.592	ENSFCAG00000003445	LSM7	69	98.592	Felis_catus
ENSCAPG00000014534	LSM7	100	95.775	ENSFALG00000011912	LSM7	70	95.775	Ficedula_albicollis
ENSCAPG00000014534	LSM7	100	100.000	ENSFDAG00000007661	LSM7	74	100.000	Fukomys_damarensis
ENSCAPG00000014534	LSM7	100	95.775	ENSFHEG00000006349	lsm7	63	95.775	Fundulus_heteroclitus
ENSCAPG00000014534	LSM7	100	92.958	ENSGMOG00000013320	lsm7	69	92.958	Gadus_morhua
ENSCAPG00000014534	LSM7	100	95.775	ENSGAFG00000013902	lsm7	69	95.775	Gambusia_affinis
ENSCAPG00000014534	LSM7	100	94.366	ENSGACG00000010390	lsm7	69	94.366	Gasterosteus_aculeatus
ENSCAPG00000014534	LSM7	100	100.000	ENSGGOG00000010172	LSM7	69	100.000	Gorilla_gorilla
ENSCAPG00000014534	LSM7	100	95.775	ENSHBUG00000004616	lsm7	69	95.775	Haplochromis_burtoni
ENSCAPG00000014534	LSM7	100	100.000	ENSHGLG00000010587	LSM7	69	100.000	Heterocephalus_glaber_female
ENSCAPG00000014534	LSM7	100	100.000	ENSHGLG00100000852	LSM7	69	100.000	Heterocephalus_glaber_male
ENSCAPG00000014534	LSM7	100	95.775	ENSHCOG00000020252	lsm7	70	95.775	Hippocampus_comes
ENSCAPG00000014534	LSM7	100	94.366	ENSIPUG00000024724	lsm7	69	94.366	Ictalurus_punctatus
ENSCAPG00000014534	LSM7	100	100.000	ENSSTOG00000028372	LSM7	70	100.000	Ictidomys_tridecemlineatus
ENSCAPG00000014534	LSM7	100	97.183	ENSJJAG00000001936	Lsm7	69	97.183	Jaculus_jaculus
ENSCAPG00000014534	LSM7	100	95.775	ENSKMAG00000022151	lsm7	69	95.775	Kryptolebias_marmoratus
ENSCAPG00000014534	LSM7	100	95.775	ENSLBEG00000005203	lsm7	69	95.775	Labrus_bergylta
ENSCAPG00000014534	LSM7	100	98.592	ENSLACG00000015700	LSM7	69	98.592	Latimeria_chalumnae
ENSCAPG00000014534	LSM7	100	98.592	ENSLOCG00000004356	lsm7	69	98.592	Lepisosteus_oculatus
ENSCAPG00000014534	LSM7	100	100.000	ENSLAFG00000029302	LSM7	69	100.000	Loxodonta_africana
ENSCAPG00000014534	LSM7	100	100.000	ENSMFAG00000044572	LSM7	69	100.000	Macaca_fascicularis
ENSCAPG00000014534	LSM7	100	100.000	ENSMMUG00000000452	LSM7	70	100.000	Macaca_mulatta
ENSCAPG00000014534	LSM7	100	100.000	ENSMNEG00000004393	LSM7	69	100.000	Macaca_nemestrina
ENSCAPG00000014534	LSM7	100	100.000	ENSMLEG00000030852	LSM7	70	100.000	Mandrillus_leucophaeus
ENSCAPG00000014534	LSM7	100	95.775	ENSMAMG00000005410	lsm7	69	95.775	Mastacembelus_armatus
ENSCAPG00000014534	LSM7	100	95.775	ENSMZEG00005028055	lsm7	69	95.775	Maylandia_zebra
ENSCAPG00000014534	LSM7	100	97.183	ENSMGAG00000000750	LSM7	61	97.183	Meleagris_gallopavo
ENSCAPG00000014534	LSM7	100	98.592	ENSMAUG00000009276	Lsm7	69	98.592	Mesocricetus_auratus
ENSCAPG00000014534	LSM7	100	100.000	ENSMICG00000028619	-	69	100.000	Microcebus_murinus
ENSCAPG00000014534	LSM7	100	100.000	ENSMICG00000009988	-	69	100.000	Microcebus_murinus
ENSCAPG00000014534	LSM7	100	98.592	ENSMOCG00000016925	Lsm7	69	98.592	Microtus_ochrogaster
ENSCAPG00000014534	LSM7	100	95.775	ENSMMOG00000019645	lsm7	68	95.775	Mola_mola
ENSCAPG00000014534	LSM7	100	98.592	ENSMODG00000004722	LSM7	69	98.592	Monodelphis_domestica
ENSCAPG00000014534	LSM7	100	95.775	ENSMALG00000014511	lsm7	55	95.775	Monopterus_albus
ENSCAPG00000014534	LSM7	100	95.775	MGP_CAROLIEiJ_G0015607	Lsm7	69	95.775	Mus_caroli
ENSCAPG00000014534	LSM7	100	95.775	ENSMUSG00000035215	Lsm7	69	95.775	Mus_musculus
ENSCAPG00000014534	LSM7	100	95.775	MGP_PahariEiJ_G0031020	Lsm7	69	95.775	Mus_pahari
ENSCAPG00000014534	LSM7	100	95.775	MGP_SPRETEiJ_G0016425	Lsm7	69	95.775	Mus_spretus
ENSCAPG00000014534	LSM7	100	91.549	ENSMLUG00000024002	-	66	91.549	Myotis_lucifugus
ENSCAPG00000014534	LSM7	100	98.592	ENSMLUG00000013097	-	69	98.592	Myotis_lucifugus
ENSCAPG00000014534	LSM7	100	97.183	ENSNGAG00000021637	Lsm7	69	97.183	Nannospalax_galili
ENSCAPG00000014534	LSM7	100	95.775	ENSNBRG00000015770	lsm7	61	95.775	Neolamprologus_brichardi
ENSCAPG00000014534	LSM7	100	95.775	ENSNBRG00000001237	-	57	95.775	Neolamprologus_brichardi
ENSCAPG00000014534	LSM7	100	100.000	ENSNLEG00000002265	LSM7	69	100.000	Nomascus_leucogenys
ENSCAPG00000014534	LSM7	100	92.958	ENSODEG00000018769	-	69	92.958	Octodon_degus
ENSCAPG00000014534	LSM7	100	87.324	ENSODEG00000008190	-	75	87.324	Octodon_degus
ENSCAPG00000014534	LSM7	100	100.000	ENSODEG00000013590	-	69	100.000	Octodon_degus
ENSCAPG00000014534	LSM7	100	95.775	ENSONIG00000001801	lsm7	61	95.775	Oreochromis_niloticus
ENSCAPG00000014534	LSM7	100	95.775	ENSORLG00000023951	lsm7	69	95.775	Oryzias_latipes
ENSCAPG00000014534	LSM7	100	95.775	ENSORLG00020022226	lsm7	69	95.775	Oryzias_latipes_hni
ENSCAPG00000014534	LSM7	100	95.775	ENSORLG00015020044	lsm7	66	95.775	Oryzias_latipes_hsok
ENSCAPG00000014534	LSM7	100	95.775	ENSOMEG00000012806	lsm7	69	95.775	Oryzias_melastigma
ENSCAPG00000014534	LSM7	100	85.915	ENSOGAG00000024373	-	70	85.915	Otolemur_garnettii
ENSCAPG00000014534	LSM7	100	97.183	ENSOGAG00000000144	-	70	97.183	Otolemur_garnettii
ENSCAPG00000014534	LSM7	100	100.000	ENSOARG00000014013	LSM7	69	100.000	Ovis_aries
ENSCAPG00000014534	LSM7	100	100.000	ENSPPAG00000026500	LSM7	69	100.000	Pan_paniscus
ENSCAPG00000014534	LSM7	100	98.592	ENSPPRG00000008624	LSM7	69	98.592	Panthera_pardus
ENSCAPG00000014534	LSM7	100	98.592	ENSPTIG00000016252	LSM7	69	98.592	Panthera_tigris_altaica
ENSCAPG00000014534	LSM7	100	100.000	ENSPTRG00000010233	LSM7	69	100.000	Pan_troglodytes
ENSCAPG00000014534	LSM7	100	100.000	ENSPANG00000020668	LSM7	69	100.000	Papio_anubis
ENSCAPG00000014534	LSM7	100	97.183	ENSPKIG00000011325	lsm7	69	97.183	Paramormyrops_kingsleyae
ENSCAPG00000014534	LSM7	100	97.183	ENSPSIG00000017149	LSM7	62	97.183	Pelodiscus_sinensis
ENSCAPG00000014534	LSM7	100	95.775	ENSPMGG00000006498	lsm7	69	95.775	Periophthalmus_magnuspinnatus
ENSCAPG00000014534	LSM7	100	98.592	ENSPCIG00000030454	LSM7	70	98.592	Phascolarctos_cinereus
ENSCAPG00000014534	LSM7	100	94.366	ENSPFOG00000012467	lsm7	63	94.366	Poecilia_formosa
ENSCAPG00000014534	LSM7	100	94.366	ENSPLAG00000000252	lsm7	66	94.366	Poecilia_latipinna
ENSCAPG00000014534	LSM7	100	94.366	ENSPMEG00000000587	lsm7	66	94.366	Poecilia_mexicana
ENSCAPG00000014534	LSM7	100	100.000	ENSPCOG00000017177	LSM7	70	100.000	Propithecus_coquereli
ENSCAPG00000014534	LSM7	100	95.775	ENSPNYG00000006938	lsm7	69	95.775	Pundamilia_nyererei
ENSCAPG00000014534	LSM7	100	95.775	ENSPNAG00000010141	lsm7	70	95.775	Pygocentrus_nattereri
ENSCAPG00000014534	LSM7	100	97.183	ENSRNOG00000019552	Lsm7	69	97.183	Rattus_norvegicus
ENSCAPG00000014534	LSM7	100	100.000	ENSRBIG00000035978	LSM7	69	100.000	Rhinopithecus_bieti
ENSCAPG00000014534	LSM7	100	100.000	ENSRROG00000034044	LSM7	69	100.000	Rhinopithecus_roxellana
ENSCAPG00000014534	LSM7	83	45.161	YNL147W	-	54	45.161	Saccharomyces_cerevisiae
ENSCAPG00000014534	LSM7	100	100.000	ENSSBOG00000034899	LSM7	69	100.000	Saimiri_boliviensis_boliviensis
ENSCAPG00000014534	LSM7	100	94.366	ENSSFOG00015006728	lsm7	69	94.366	Scleropages_formosus
ENSCAPG00000014534	LSM7	100	95.775	ENSSMAG00000004195	lsm7	65	95.775	Scophthalmus_maximus
ENSCAPG00000014534	LSM7	100	95.775	ENSSDUG00000001863	lsm7	69	95.775	Seriola_dumerili
ENSCAPG00000014534	LSM7	100	95.775	ENSSLDG00000016339	lsm7	69	95.775	Seriola_lalandi_dorsalis
ENSCAPG00000014534	LSM7	100	95.775	ENSSPAG00000015221	lsm7	69	95.775	Stegastes_partitus
ENSCAPG00000014534	LSM7	100	100.000	ENSSSCG00000013463	LSM7	70	100.000	Sus_scrofa
ENSCAPG00000014534	LSM7	100	95.775	ENSTGUG00000000067	LSM7	70	95.775	Taeniopygia_guttata
ENSCAPG00000014534	LSM7	100	95.775	ENSTRUG00000022913	lsm7	69	95.775	Takifugu_rubripes
ENSCAPG00000014534	LSM7	100	95.775	ENSTNIG00000015525	lsm7	69	95.775	Tetraodon_nigroviridis
ENSCAPG00000014534	LSM7	99	87.143	ENSTBEG00000016602	LSM7	100	87.143	Tupaia_belangeri
ENSCAPG00000014534	LSM7	100	98.592	ENSUAMG00000000912	LSM7	59	98.592	Ursus_americanus
ENSCAPG00000014534	LSM7	100	98.592	ENSUMAG00000006556	LSM7	55	98.592	Ursus_maritimus
ENSCAPG00000014534	LSM7	100	98.592	ENSVVUG00000002640	LSM7	65	98.592	Vulpes_vulpes
ENSCAPG00000014534	LSM7	100	94.366	ENSXETG00000022166	lsm7	70	94.366	Xenopus_tropicalis
ENSCAPG00000014534	LSM7	100	95.775	ENSXCOG00000002572	lsm7	70	95.775	Xiphophorus_couchianus
ENSCAPG00000014534	LSM7	100	95.775	ENSXMAG00000018630	lsm7	69	95.775	Xiphophorus_maculatus