EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000014619 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 45072 bases
Position: chrAVPZ01000167.1:3297456-3342527
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014237	IF-2	PF11987.8	3.5e-19	1	1
ENSCAPP00000014235	IF-2	PF11987.8	3.5e-19	1	1
ENSCAPP00000014228	IF-2	PF11987.8	3.5e-19	1	1
ENSCAPP00000014237	GTP_EFTU	PF00009.27	2.2e-31	1	1
ENSCAPP00000014235	GTP_EFTU	PF00009.27	2.2e-31	1	1
ENSCAPP00000014228	GTP_EFTU	PF00009.27	2.2e-31	1	1
ENSCAPP00000014228	MMR_HSR1	PF01926.23	2.3e-07	1	1
ENSCAPP00000014237	MMR_HSR1	PF01926.23	2.5e-07	1	1
ENSCAPP00000014235	MMR_HSR1	PF01926.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018007	-	3513	-	ENSCAPP00000014237	1170 (aa)	-	-
ENSCAPT00000018005	-	3534	-	ENSCAPP00000014235	1177 (aa)	-	-
ENSCAPT00000017998	-	3561	-	ENSCAPP00000014228	1186 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000014619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014619	-	51	81.350	ENSAPOG00000004375	eif5b	99	64.711	Acanthochromis_polyacanthus
ENSCAPG00000014619	-	69	72.076	ENSACIG00000024324	eif5b	81	70.128	Amphilophus_citrinellus
ENSCAPG00000014619	-	82	70.926	ENSAOCG00000018386	eif5b	99	64.487	Amphiprion_ocellaris
ENSCAPG00000014619	-	73	72.727	ENSATEG00000011259	eif5b	87	72.872	Anabas_testudineus
ENSCAPG00000014619	-	50	83.953	ENSATEG00000011451	-	63	81.892	Anabas_testudineus
ENSCAPG00000014619	-	51	81.994	ENSATEG00000006765	eif5b	97	64.174	Anabas_testudineus
ENSCAPG00000014619	-	98	74.145	ENSACAG00000008305	-	98	74.732	Anolis_carolinensis
ENSCAPG00000014619	-	73	71.461	ENSACLG00000005530	eif5b	88	70.838	Astatotilapia_calliptera
ENSCAPG00000014619	-	73	73.003	ENSAMXG00000018383	eif5b	92	65.551	Astyanax_mexicanus
ENSCAPG00000014619	-	50	55.649	WBGene00021857	iffb-1	74	46.459	Caenorhabditis_elegans
ENSCAPG00000014619	-	97	81.834	ENSCJAG00000009960	-	97	82.419	Callithrix_jacchus
ENSCAPG00000014619	-	99	94.167	ENSCPOG00000011967	-	98	94.167	Cavia_porcellus
ENSCAPG00000014619	-	52	82.949	ENSCHOG00000002137	-	67	73.178	Choloepus_hoffmanni
ENSCAPG00000014619	-	51	82.637	ENSCSEG00000014153	eif5b	98	63.792	Cynoglossus_semilaevis
ENSCAPG00000014619	-	51	81.833	ENSCVAG00000019619	eif5b	99	63.366	Cyprinodon_variegatus
ENSCAPG00000014619	-	73	74.664	ENSDARG00000016548	eif5b	93	65.540	Danio_rerio
ENSCAPG00000014619	-	59	69.088	FBgn0026259	eIF5B	74	58.542	Drosophila_melanogaster
ENSCAPG00000014619	-	61	98.000	ENSEEUG00000001093	-	59	98.000	Erinaceus_europaeus
ENSCAPG00000014619	-	72	71.922	ENSELUG00000001132	eif5b	58	82.068	Esox_lucius
ENSCAPG00000014619	-	98	68.729	ENSFALG00000003920	-	96	69.475	Ficedula_albicollis
ENSCAPG00000014619	-	62	78.457	ENSGMOG00000002031	eif5b	66	75.532	Gadus_morhua
ENSCAPG00000014619	-	59	83.120	ENSGAFG00000000088	eif5b	72	83.120	Gambusia_affinis
ENSCAPG00000014619	-	51	80.193	ENSGACG00000010536	eif5b	85	80.193	Gasterosteus_aculeatus
ENSCAPG00000014619	-	54	88.415	ENSGAGG00000022242	-	99	88.024	Gopherus_agassizii
ENSCAPG00000014619	-	73	72.511	ENSHBUG00000023319	eif5b	99	63.547	Haplochromis_burtoni
ENSCAPG00000014619	-	73	72.135	ENSHCOG00000002807	eif5b	99	63.076	Hippocampus_comes
ENSCAPG00000014619	-	73	74.266	ENSIPUG00000020910	eif5b	99	65.590	Ictalurus_punctatus
ENSCAPG00000014619	-	73	73.613	ENSKMAG00000004325	eif5b	98	64.535	Kryptolebias_marmoratus
ENSCAPG00000014619	-	73	70.045	ENSLBEG00000027090	eif5b	99	62.916	Labrus_bergylta
ENSCAPG00000014619	-	51	83.573	ENSLACG00000011688	eif5b	99	67.731	Latimeria_chalumnae
ENSCAPG00000014619	-	73	72.819	ENSMAMG00000022568	eif5b	99	63.287	Mastacembelus_armatus
ENSCAPG00000014619	-	51	81.833	ENSMZEG00005012696	eif5b	99	63.495	Maylandia_zebra
ENSCAPG00000014619	-	98	76.151	ENSMODG00000001387	-	99	77.246	Monodelphis_domestica
ENSCAPG00000014619	-	82	69.331	ENSMALG00000005862	eif5b	99	63.054	Monopterus_albus
ENSCAPG00000014619	-	73	69.379	ENSNBRG00000021912	eif5b	93	62.177	Neolamprologus_brichardi
ENSCAPG00000014619	-	80	97.070	ENSMEUG00000007080	-	81	97.070	Notamacropus_eugenii
ENSCAPG00000014619	-	73	72.316	ENSONIG00000018749	eif5b	99	62.932	Oreochromis_niloticus
ENSCAPG00000014619	-	98	85.366	ENSOCUG00000021154	-	99	86.462	Oryctolagus_cuniculus
ENSCAPG00000014619	-	73	71.959	ENSORLG00000001525	eif5b	99	61.866	Oryzias_latipes
ENSCAPG00000014619	-	73	72.072	ENSORLG00020005327	eif5b	99	63.162	Oryzias_latipes_hni
ENSCAPG00000014619	-	73	72.480	ENSORLG00015008949	eif5b	99	63.297	Oryzias_latipes_hsok
ENSCAPG00000014619	-	66	71.411	ENSOMEG00000016539	eif5b	99	69.136	Oryzias_melastigma
ENSCAPG00000014619	-	51	81.833	ENSPKIG00000011133	eif5b	98	62.247	Paramormyrops_kingsleyae
ENSCAPG00000014619	-	57	78.612	ENSPSIG00000014914	-	93	78.531	Pelodiscus_sinensis
ENSCAPG00000014619	-	74	62.249	ENSPMAG00000004508	eif5b	73	62.472	Petromyzon_marinus
ENSCAPG00000014619	-	51	81.511	ENSPFOG00000007543	eif5b	90	80.952	Poecilia_formosa
ENSCAPG00000014619	-	73	72.902	ENSPLAG00000015913	eif5b	99	63.577	Poecilia_latipinna
ENSCAPG00000014619	-	51	81.511	ENSPMEG00000006712	eif5b	99	64.016	Poecilia_mexicana
ENSCAPG00000014619	-	61	90.625	ENSPCAG00000007829	-	70	88.525	Procavia_capensis
ENSCAPG00000014619	-	98	82.663	ENSPCOG00000019508	-	100	93.569	Propithecus_coquereli
ENSCAPG00000014619	-	89	97.143	ENSPVAG00000006592	-	92	82.289	Pteropus_vampyrus
ENSCAPG00000014619	-	73	71.702	ENSPNYG00000021051	eif5b	89	72.235	Pundamilia_nyererei
ENSCAPG00000014619	-	73	74.350	ENSPNAG00000023852	eif5b	99	65.214	Pygocentrus_nattereri
ENSCAPG00000014619	-	50	50.498	YAL035W	FUN12	60	50.498	Saccharomyces_cerevisiae
ENSCAPG00000014619	-	51	82.637	ENSSFOG00015000594	eif5b	99	64.573	Scleropages_formosus
ENSCAPG00000014619	-	51	79.743	ENSSMAG00000000045	eif5b	82	69.409	Scophthalmus_maximus
ENSCAPG00000014619	-	69	72.727	ENSSDUG00000005847	eif5b	80	72.515	Seriola_dumerili
ENSCAPG00000014619	-	69	72.967	ENSSLDG00000013738	eif5b	81	72.638	Seriola_lalandi_dorsalis
ENSCAPG00000014619	-	68	70.460	ENSTRUG00000007772	eif5b	82	70.163	Takifugu_rubripes
ENSCAPG00000014619	-	75	68.152	ENSTNIG00000006580	eif5b	95	70.449	Tetraodon_nigroviridis
ENSCAPG00000014619	-	77	97.817	ENSTBEG00000009133	-	79	97.817	Tupaia_belangeri
ENSCAPG00000014619	-	99	64.351	ENSXETG00000019377	eif5b	75	75.112	Xenopus_tropicalis
ENSCAPG00000014619	-	73	70.068	ENSXCOG00000016681	eif5b	94	68.197	Xiphophorus_couchianus
ENSCAPG00000014619	-	73	70.227	ENSXMAG00000001002	eif5b	94	68.350	Xiphophorus_maculatus