EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000014660 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 20692 bases
Position: chrAVPZ01000234.1:5450205-5470896
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014249	PPR	PF01535.20	2.4e-14	1	2
ENSCAPP00000014249	PPR	PF01535.20	2.4e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018019	-	1959	-	ENSCAPP00000014249	652 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000014660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014660	-	99	74.203	ENSG00000248919	ATP5MF-PTCD1	87	74.355	Homo_sapiens
ENSCAPG00000014660	-	99	74.203	ENSG00000106246	PTCD1	94	74.355	Homo_sapiens
ENSCAPG00000014660	-	90	46.077	ENSAPOG00000010679	ptcd1	88	46.077	Acanthochromis_polyacanthus
ENSCAPG00000014660	-	100	78.723	ENSAMEG00000006224	-	87	78.723	Ailuropoda_melanoleuca
ENSCAPG00000014660	-	94	48.006	ENSACIG00000017861	ptcd1	88	48.006	Amphilophus_citrinellus
ENSCAPG00000014660	-	99	45.495	ENSAOCG00000020741	-	91	45.495	Amphiprion_ocellaris
ENSCAPG00000014660	-	90	46.411	ENSAOCG00000022617	ptcd1	86	46.411	Amphiprion_ocellaris
ENSCAPG00000014660	-	99	45.727	ENSAPEG00000022632	ptcd1	91	45.727	Amphiprion_percula
ENSCAPG00000014660	-	93	48.697	ENSATEG00000007016	ptcd1	80	49.746	Anabas_testudineus
ENSCAPG00000014660	-	93	58.509	ENSAPLG00000006862	-	94	58.509	Anas_platyrhynchos
ENSCAPG00000014660	-	97	56.402	ENSACAG00000012871	-	86	56.402	Anolis_carolinensis
ENSCAPG00000014660	-	98	74.455	ENSANAG00000035790	-	94	74.455	Aotus_nancymaae
ENSCAPG00000014660	-	92	47.403	ENSACLG00000002824	ptcd1	80	48.567	Astatotilapia_calliptera
ENSCAPG00000014660	-	93	45.736	ENSAMXG00000037292	ptcd1	88	46.022	Astyanax_mexicanus
ENSCAPG00000014660	-	100	75.532	ENSBTAG00000020440	-	81	75.532	Bos_taurus
ENSCAPG00000014660	-	100	74.316	ENSCJAG00000015815	-	94	74.316	Callithrix_jacchus
ENSCAPG00000014660	-	100	77.660	ENSCAFG00000015055	-	87	77.660	Canis_familiaris
ENSCAPG00000014660	-	100	77.660	ENSCAFG00020014480	-	87	77.660	Canis_lupus_dingo
ENSCAPG00000014660	-	100	75.380	ENSCHIG00000027000	-	93	75.380	Capra_hircus
ENSCAPG00000014660	-	98	77.259	ENSTSYG00000029495	-	93	76.596	Carlito_syrichta
ENSCAPG00000014660	-	100	98.480	ENSCPOG00000001780	-	93	98.480	Cavia_porcellus
ENSCAPG00000014660	-	98	73.684	ENSCCAG00000034025	-	94	73.293	Cebus_capucinus
ENSCAPG00000014660	-	99	74.312	ENSCATG00000040859	-	93	74.618	Cercocebus_atys
ENSCAPG00000014660	-	98	88.253	ENSCLAG00000006354	-	93	87.538	Chinchilla_lanigera
ENSCAPG00000014660	-	91	73.710	ENSCSAG00000017794	-	89	74.210	Chlorocebus_sabaeus
ENSCAPG00000014660	-	95	57.511	ENSCPBG00000020866	-	85	59.400	Chrysemys_picta_bellii
ENSCAPG00000014660	-	88	30.984	ENSCING00000007717	-	93	31.369	Ciona_intestinalis
ENSCAPG00000014660	-	99	74.233	ENSCANG00000023441	-	93	74.540	Colobus_angolensis_palliatus
ENSCAPG00000014660	-	100	75.114	ENSCGRG00001023686	Ptcd1	93	75.114	Cricetulus_griseus_chok1gshd
ENSCAPG00000014660	-	100	75.114	ENSCGRG00000015031	Ptcd1	93	75.114	Cricetulus_griseus_crigri
ENSCAPG00000014660	-	90	45.546	ENSCSEG00000002378	ptcd1	80	45.997	Cynoglossus_semilaevis
ENSCAPG00000014660	-	91	46.875	ENSCVAG00000015826	ptcd1	83	46.875	Cyprinodon_variegatus
ENSCAPG00000014660	-	92	46.667	ENSCVAG00000003621	ptcd1	90	46.266	Cyprinodon_variegatus
ENSCAPG00000014660	-	93	48.475	ENSDARG00000076176	ptcd1	88	48.622	Danio_rerio
ENSCAPG00000014660	-	100	74.433	ENSDNOG00000009957	-	93	74.433	Dasypus_novemcinctus
ENSCAPG00000014660	-	98	76.805	ENSDORG00000000740	Ptcd1	94	76.805	Dipodomys_ordii
ENSCAPG00000014660	-	93	40.549	ENSEBUG00000014515	ptcd1	99	40.995	Eptatretus_burgeri
ENSCAPG00000014660	-	100	79.939	ENSEASG00005002480	-	93	79.939	Equus_asinus_asinus
ENSCAPG00000014660	-	100	79.939	ENSECAG00000016617	-	93	79.939	Equus_caballus
ENSCAPG00000014660	-	90	46.774	ENSELUG00000016517	ptcd1	82	46.764	Esox_lucius
ENSCAPG00000014660	-	100	79.027	ENSFCAG00000015069	-	93	79.027	Felis_catus
ENSCAPG00000014660	-	98	56.593	ENSFALG00000013803	-	92	57.508	Ficedula_albicollis
ENSCAPG00000014660	-	100	82.371	ENSFDAG00000006393	-	93	82.371	Fukomys_damarensis
ENSCAPG00000014660	-	80	47.310	ENSFHEG00000012491	ptcd1	88	47.310	Fundulus_heteroclitus
ENSCAPG00000014660	-	92	45.902	ENSGMOG00000007639	ptcd1	95	45.902	Gadus_morhua
ENSCAPG00000014660	-	93	56.765	ENSGALG00000004711	-	88	57.076	Gallus_gallus
ENSCAPG00000014660	-	90	46.833	ENSGAFG00000013175	ptcd1	82	46.901	Gambusia_affinis
ENSCAPG00000014660	-	91	47.627	ENSGACG00000016607	ptcd1	91	47.627	Gasterosteus_aculeatus
ENSCAPG00000014660	-	88	58.404	ENSGAGG00000021832	-	84	59.507	Gopherus_agassizii
ENSCAPG00000014660	-	98	74.884	ENSGGOG00000015123	-	92	75.039	Gorilla_gorilla
ENSCAPG00000014660	-	92	48.052	ENSHBUG00000018275	ptcd1	80	48.904	Haplochromis_burtoni
ENSCAPG00000014660	-	100	84.067	ENSHGLG00000017621	-	93	84.067	Heterocephalus_glaber_female
ENSCAPG00000014660	-	100	84.067	ENSHGLG00100007218	-	93	84.067	Heterocephalus_glaber_male
ENSCAPG00000014660	-	89	46.193	ENSHCOG00000010784	ptcd1	82	46.429	Hippocampus_comes
ENSCAPG00000014660	-	100	79.179	ENSSTOG00000001682	-	93	79.179	Ictidomys_tridecemlineatus
ENSCAPG00000014660	-	100	75.076	ENSJJAG00000000319	Ptcd1	94	75.076	Jaculus_jaculus
ENSCAPG00000014660	-	90	47.993	ENSKMAG00000008708	ptcd1	80	48.142	Kryptolebias_marmoratus
ENSCAPG00000014660	-	94	45.541	ENSLBEG00000008061	ptcd1	85	45.701	Labrus_bergylta
ENSCAPG00000014660	-	93	55.627	ENSLACG00000011172	ptcd1	83	57.616	Latimeria_chalumnae
ENSCAPG00000014660	-	98	51.786	ENSLOCG00000004833	ptcd1	95	53.226	Lepisosteus_oculatus
ENSCAPG00000014660	-	98	72.755	ENSLAFG00000002588	-	93	72.382	Loxodonta_africana
ENSCAPG00000014660	-	99	74.465	ENSMFAG00000041324	-	93	74.771	Macaca_fascicularis
ENSCAPG00000014660	-	99	74.312	ENSMMUG00000030408	-	93	74.618	Macaca_mulatta
ENSCAPG00000014660	-	99	74.159	ENSMNEG00000043786	-	93	74.465	Macaca_nemestrina
ENSCAPG00000014660	-	99	56.790	ENSMLEG00000031179	-	92	58.951	Mandrillus_leucophaeus
ENSCAPG00000014660	-	92	48.618	ENSMAMG00000007623	ptcd1	83	48.618	Mastacembelus_armatus
ENSCAPG00000014660	-	92	47.727	ENSMZEG00005012722	ptcd1	80	48.567	Maylandia_zebra
ENSCAPG00000014660	-	98	57.186	ENSMGAG00000004211	-	86	57.337	Meleagris_gallopavo
ENSCAPG00000014660	-	100	76.596	ENSMICG00000017428	-	93	76.596	Microcebus_murinus
ENSCAPG00000014660	-	94	46.388	ENSMMOG00000020243	ptcd1	91	46.549	Mola_mola
ENSCAPG00000014660	-	98	62.935	ENSMODG00000001350	-	89	62.784	Monodelphis_domestica
ENSCAPG00000014660	-	92	48.124	ENSMALG00000018442	ptcd1	81	47.635	Monopterus_albus
ENSCAPG00000014660	-	99	76.263	MGP_CAROLIEiJ_G0028011	Ptcd1	93	76.417	Mus_caroli
ENSCAPG00000014660	-	99	75.957	ENSMUSG00000029624	Ptcd1	93	76.110	Mus_musculus
ENSCAPG00000014660	-	99	76.110	MGP_PahariEiJ_G0024580	Ptcd1	93	76.263	Mus_pahari
ENSCAPG00000014660	-	99	76.570	MGP_SPRETEiJ_G0029012	Ptcd1	93	76.723	Mus_spretus
ENSCAPG00000014660	-	99	77.134	ENSMPUG00000016518	-	93	77.896	Mustela_putorius_furo
ENSCAPG00000014660	-	98	79.225	ENSMLUG00000010994	-	87	79.027	Myotis_lucifugus
ENSCAPG00000014660	-	93	47.695	ENSNBRG00000010079	ptcd1	88	46.635	Neolamprologus_brichardi
ENSCAPG00000014660	-	83	75.551	ENSNLEG00000011060	-	92	75.551	Nomascus_leucogenys
ENSCAPG00000014660	-	97	63.344	ENSMEUG00000006930	-	93	63.344	Notamacropus_eugenii
ENSCAPG00000014660	-	88	75.510	ENSOPRG00000013647	-	83	75.176	Ochotona_princeps
ENSCAPG00000014660	-	89	47.306	ENSONIG00000003168	ptcd1	95	47.218	Oreochromis_niloticus
ENSCAPG00000014660	-	86	55.594	ENSOANG00000007728	-	74	55.594	Ornithorhynchus_anatinus
ENSCAPG00000014660	-	99	75.920	ENSOCUG00000010584	-	91	75.920	Oryctolagus_cuniculus
ENSCAPG00000014660	-	92	47.471	ENSORLG00000009275	ptcd1	83	48.148	Oryzias_latipes
ENSCAPG00000014660	-	92	46.982	ENSORLG00020000988	ptcd1	84	47.643	Oryzias_latipes_hni
ENSCAPG00000014660	-	92	46.493	ENSORLG00015010557	ptcd1	84	47.138	Oryzias_latipes_hsok
ENSCAPG00000014660	-	89	48.129	ENSOMEG00000020627	ptcd1	85	48.288	Oryzias_melastigma
ENSCAPG00000014660	-	98	75.309	ENSOGAG00000010877	-	93	75.309	Otolemur_garnettii
ENSCAPG00000014660	-	100	71.017	ENSOARG00000018676	-	94	71.017	Ovis_aries
ENSCAPG00000014660	-	99	74.052	ENSPPAG00000036024	-	94	74.355	Pan_paniscus
ENSCAPG00000014660	-	100	79.179	ENSPPRG00000003478	-	94	79.179	Panthera_pardus
ENSCAPG00000014660	-	99	74.052	ENSPTRG00000019452	-	94	74.355	Pan_troglodytes
ENSCAPG00000014660	-	99	74.465	ENSPANG00000016730	-	93	74.771	Papio_anubis
ENSCAPG00000014660	-	96	49.925	ENSPKIG00000014215	ptcd1	92	51.011	Paramormyrops_kingsleyae
ENSCAPG00000014660	-	90	56.979	ENSPSIG00000011184	-	100	57.705	Pelodiscus_sinensis
ENSCAPG00000014660	-	78	42.667	ENSPMAG00000009667	ptcd1	100	42.667	Petromyzon_marinus
ENSCAPG00000014660	-	92	65.811	ENSPCIG00000024778	-	89	63.843	Phascolarctos_cinereus
ENSCAPG00000014660	-	90	47.754	ENSPFOG00000004458	ptcd1	83	47.360	Poecilia_formosa
ENSCAPG00000014660	-	90	47.020	ENSPLAG00000011051	ptcd1	82	47.395	Poecilia_latipinna
ENSCAPG00000014660	-	90	47.587	ENSPMEG00000020547	ptcd1	83	47.587	Poecilia_mexicana
ENSCAPG00000014660	-	88	46.801	ENSPREG00000000059	ptcd1	82	46.644	Poecilia_reticulata
ENSCAPG00000014660	-	99	74.277	ENSPPYG00000017377	-	99	74.277	Pongo_abelii
ENSCAPG00000014660	-	88	80.986	ENSPCAG00000001852	-	89	80.986	Procavia_capensis
ENSCAPG00000014660	-	100	77.508	ENSPCOG00000018596	-	93	77.508	Propithecus_coquereli
ENSCAPG00000014660	-	64	84.000	ENSPVAG00000007529	-	65	84.000	Pteropus_vampyrus
ENSCAPG00000014660	-	92	47.240	ENSPNYG00000019993	ptcd1	80	48.398	Pundamilia_nyererei
ENSCAPG00000014660	-	94	50.079	ENSPNAG00000014931	ptcd1	90	49.134	Pygocentrus_nattereri
ENSCAPG00000014660	-	97	75.900	ENSRNOG00000000987	Ptcd1	92	76.056	Rattus_norvegicus
ENSCAPG00000014660	-	99	74.387	ENSRBIG00000043393	-	93	74.693	Rhinopithecus_bieti
ENSCAPG00000014660	-	99	74.233	ENSRROG00000036420	-	93	74.540	Rhinopithecus_roxellana
ENSCAPG00000014660	-	100	74.468	ENSSBOG00000024114	-	94	74.468	Saimiri_boliviensis_boliviensis
ENSCAPG00000014660	-	98	62.100	ENSSHAG00000011376	-	92	64.590	Sarcophilus_harrisii
ENSCAPG00000014660	-	95	53.678	ENSSFOG00015007909	ptcd1	85	53.727	Scleropages_formosus
ENSCAPG00000014660	-	94	45.280	ENSSMAG00000000218	ptcd1	94	45.572	Scophthalmus_maximus
ENSCAPG00000014660	-	92	47.869	ENSSDUG00000015671	ptcd1	84	48.814	Seriola_dumerili
ENSCAPG00000014660	-	90	47.682	ENSSLDG00000014261	ptcd1	83	47.651	Seriola_lalandi_dorsalis
ENSCAPG00000014660	-	99	54.786	ENSSPUG00000003540	-	91	54.948	Sphenodon_punctatus
ENSCAPG00000014660	-	94	47.134	ENSSPAG00000011049	ptcd1	84	47.134	Stegastes_partitus
ENSCAPG00000014660	-	99	76.994	ENSSSCG00000007622	-	99	76.631	Sus_scrofa
ENSCAPG00000014660	-	93	59.574	ENSTGUG00000007563	-	98	60.430	Taeniopygia_guttata
ENSCAPG00000014660	-	92	46.318	ENSTRUG00000013471	ptcd1	82	46.318	Takifugu_rubripes
ENSCAPG00000014660	-	93	47.419	ENSTNIG00000008271	ptcd1	83	49.069	Tetraodon_nigroviridis
ENSCAPG00000014660	-	100	75.189	ENSTBEG00000011021	-	93	75.189	Tupaia_belangeri
ENSCAPG00000014660	-	100	75.532	ENSTTRG00000003006	-	94	75.532	Tursiops_truncatus
ENSCAPG00000014660	-	100	78.571	ENSUAMG00000008049	-	93	78.571	Ursus_americanus
ENSCAPG00000014660	-	99	77.896	ENSVVUG00000008836	-	93	77.896	Vulpes_vulpes
ENSCAPG00000014660	-	90	54.409	ENSXETG00000009891	ptcd1	88	53.236	Xenopus_tropicalis
ENSCAPG00000014660	-	90	46.281	ENSXMAG00000015540	ptcd1	82	46.644	Xiphophorus_maculatus