EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000014785 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 32991 bases
Position: chrAVPZ01000445.1:21459033-21492023
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014409	zf-CCCH	PF00642.24	7.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018179	-	1974	-	ENSCAPP00000014409	657 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000014785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000014785	-	93	48.125	ENSCAPG00000008657	UNK	85	46.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014785	-	93	79.219	ENSG00000059145	UNKL	100	90.351	Homo_sapiens
ENSCAPG00000014785	-	88	89.815	ENSAPOG00000023784	unkl	72	89.815	Acanthochromis_polyacanthus
ENSCAPG00000014785	-	93	60.714	ENSACIG00000023268	unkl	87	60.964	Amphilophus_citrinellus
ENSCAPG00000014785	-	88	89.815	ENSAOCG00000022845	unkl	72	89.815	Amphiprion_ocellaris
ENSCAPG00000014785	-	88	89.815	ENSAPEG00000011709	unkl	72	89.815	Amphiprion_percula
ENSCAPG00000014785	-	88	89.815	ENSATEG00000004328	unkl	72	89.815	Anabas_testudineus
ENSCAPG00000014785	-	82	86.099	ENSAPLG00000016186	-	69	87.500	Anas_platyrhynchos
ENSCAPG00000014785	-	93	77.031	ENSANAG00000021942	-	90	77.500	Aotus_nancymaae
ENSCAPG00000014785	-	88	88.889	ENSACLG00000006189	unkl	72	88.889	Astatotilapia_calliptera
ENSCAPG00000014785	-	89	90.741	ENSAMXG00000007890	unkl	72	90.741	Astyanax_mexicanus
ENSCAPG00000014785	-	93	75.743	ENSBTAG00000014126	-	96	75.743	Bos_taurus
ENSCAPG00000014785	-	93	75.039	ENSCJAG00000013151	-	86	75.039	Callithrix_jacchus
ENSCAPG00000014785	-	93	75.155	ENSCAFG00000019581	UNKL	87	75.155	Canis_familiaris
ENSCAPG00000014785	-	93	78.331	ENSCAFG00020001284	-	86	78.331	Canis_lupus_dingo
ENSCAPG00000014785	-	93	68.701	ENSTSYG00000033619	-	87	67.188	Carlito_syrichta
ENSCAPG00000014785	-	93	88.697	ENSCPOG00000011846	-	87	89.168	Cavia_porcellus
ENSCAPG00000014785	-	93	78.560	ENSCCAG00000022808	-	87	78.717	Cebus_capucinus
ENSCAPG00000014785	-	93	78.527	ENSCATG00000033183	-	87	78.997	Cercocebus_atys
ENSCAPG00000014785	-	93	86.028	ENSCLAG00000015420	-	100	84.461	Chinchilla_lanigera
ENSCAPG00000014785	-	93	78.906	ENSCSAG00000011709	-	87	79.375	Chlorocebus_sabaeus
ENSCAPG00000014785	-	89	86.026	ENSCPBG00000002794	-	72	86.026	Chrysemys_picta_bellii
ENSCAPG00000014785	-	93	76.726	ENSCANG00000036315	-	100	77.368	Colobus_angolensis_palliatus
ENSCAPG00000014785	-	93	82.437	ENSCGRG00001014153	Unkl	87	81.804	Cricetulus_griseus_chok1gshd
ENSCAPG00000014785	-	93	82.437	ENSCGRG00000010384	Unkl	90	81.804	Cricetulus_griseus_crigri
ENSCAPG00000014785	-	88	89.815	ENSCSEG00000010415	unkl	72	89.815	Cynoglossus_semilaevis
ENSCAPG00000014785	-	88	89.352	ENSCVAG00000015910	unkl	72	89.352	Cyprinodon_variegatus
ENSCAPG00000014785	-	88	90.278	ENSDARG00000037838	unkl	72	90.278	Danio_rerio
ENSCAPG00000014785	-	95	69.055	ENSDORG00000015663	Unkl	94	71.189	Dipodomys_ordii
ENSCAPG00000014785	-	93	77.548	ENSEASG00005000274	-	87	78.025	Equus_asinus_asinus
ENSCAPG00000014785	-	93	78.150	ENSECAG00000010641	UNKL	100	76.208	Equus_caballus
ENSCAPG00000014785	-	88	90.741	ENSELUG00000021446	unkl	72	90.741	Esox_lucius
ENSCAPG00000014785	-	93	70.189	ENSFCAG00000010643	-	86	72.397	Felis_catus
ENSCAPG00000014785	-	93	62.701	ENSFHEG00000002811	unkl	87	63.183	Fundulus_heteroclitus
ENSCAPG00000014785	-	88	90.278	ENSGALG00000043765	-	79	90.278	Gallus_gallus
ENSCAPG00000014785	-	88	88.889	ENSGAFG00000017960	unkl	72	88.889	Gambusia_affinis
ENSCAPG00000014785	-	89	85.590	ENSGAGG00000023664	-	72	85.590	Gopherus_agassizii
ENSCAPG00000014785	-	93	78.660	ENSGGOG00000014915	-	87	78.037	Gorilla_gorilla
ENSCAPG00000014785	-	88	88.889	ENSHBUG00000003486	unkl	74	88.889	Haplochromis_burtoni
ENSCAPG00000014785	-	93	85.714	ENSHGLG00000001586	-	87	85.714	Heterocephalus_glaber_female
ENSCAPG00000014785	-	93	85.714	ENSHGLG00100007463	-	90	85.714	Heterocephalus_glaber_male
ENSCAPG00000014785	-	93	61.129	ENSHCOG00000015734	unkl	87	61.129	Hippocampus_comes
ENSCAPG00000014785	-	88	90.278	ENSIPUG00000019510	unkl	72	90.278	Ictalurus_punctatus
ENSCAPG00000014785	-	93	80.251	ENSSTOG00000003487	-	90	78.997	Ictidomys_tridecemlineatus
ENSCAPG00000014785	-	93	82.665	ENSJJAG00000011047	Unkl	87	81.701	Jaculus_jaculus
ENSCAPG00000014785	-	88	89.352	ENSKMAG00000018810	unkl	72	89.352	Kryptolebias_marmoratus
ENSCAPG00000014785	-	93	60.995	ENSLBEG00000023912	unkl	87	60.995	Labrus_bergylta
ENSCAPG00000014785	-	90	84.681	ENSLACG00000009285	unkl	83	84.681	Latimeria_chalumnae
ENSCAPG00000014785	-	88	89.815	ENSLOCG00000003648	unkl	78	89.815	Lepisosteus_oculatus
ENSCAPG00000014785	-	96	69.970	ENSLAFG00000018262	-	89	69.970	Loxodonta_africana
ENSCAPG00000014785	-	93	79.560	ENSMFAG00000000632	-	87	80.031	Macaca_fascicularis
ENSCAPG00000014785	-	93	74.883	ENSMMUG00000012440	-	87	74.883	Macaca_mulatta
ENSCAPG00000014785	-	93	78.594	ENSMNEG00000036131	-	87	79.062	Macaca_nemestrina
ENSCAPG00000014785	-	93	68.917	ENSMLEG00000037946	-	89	68.917	Mandrillus_leucophaeus
ENSCAPG00000014785	-	88	89.815	ENSMAMG00000002709	unkl	72	89.815	Mastacembelus_armatus
ENSCAPG00000014785	-	88	88.889	ENSMZEG00005022469	unkl	72	88.889	Maylandia_zebra
ENSCAPG00000014785	-	88	90.278	ENSMGAG00000006920	UNKL	75	90.278	Meleagris_gallopavo
ENSCAPG00000014785	-	93	81.094	ENSMAUG00000016281	Unkl	87	80.885	Mesocricetus_auratus
ENSCAPG00000014785	-	93	73.312	ENSMICG00000007141	-	86	70.487	Microcebus_murinus
ENSCAPG00000014785	-	93	80.534	ENSMOCG00000011424	Unkl	87	80.253	Microtus_ochrogaster
ENSCAPG00000014785	-	93	61.812	ENSMMOG00000014848	unkl	86	62.136	Mola_mola
ENSCAPG00000014785	-	92	85.654	ENSMODG00000016188	-	78	85.654	Monodelphis_domestica
ENSCAPG00000014785	-	88	89.352	ENSMALG00000020837	unkl	72	89.352	Monopterus_albus
ENSCAPG00000014785	-	93	80.442	MGP_CAROLIEiJ_G0021225	Unkl	100	77.164	Mus_caroli
ENSCAPG00000014785	-	93	80.442	ENSMUSG00000015127	Unkl	100	76.980	Mus_musculus
ENSCAPG00000014785	-	93	81.388	MGP_PahariEiJ_G0023543	Unkl	87	80.411	Mus_pahari
ENSCAPG00000014785	-	93	80.442	MGP_SPRETEiJ_G0022136	Unkl	100	76.980	Mus_spretus
ENSCAPG00000014785	-	93	72.969	ENSMPUG00000015653	-	97	72.188	Mustela_putorius_furo
ENSCAPG00000014785	-	87	95.694	ENSMLUG00000011207	-	81	95.694	Myotis_lucifugus
ENSCAPG00000014785	-	93	81.690	ENSNGAG00000002821	Unkl	87	80.408	Nannospalax_galili
ENSCAPG00000014785	-	88	88.889	ENSNBRG00000015104	unkl	73	88.889	Neolamprologus_brichardi
ENSCAPG00000014785	-	93	79.375	ENSNLEG00000008624	-	88	79.844	Nomascus_leucogenys
ENSCAPG00000014785	-	93	86.076	ENSODEG00000017747	-	87	86.551	Octodon_degus
ENSCAPG00000014785	-	89	88.479	ENSONIG00000001411	unkl	72	88.479	Oreochromis_niloticus
ENSCAPG00000014785	-	88	90.741	ENSORLG00000005070	unkl	72	90.741	Oryzias_latipes
ENSCAPG00000014785	-	88	90.741	ENSORLG00020005376	unkl	72	90.741	Oryzias_latipes_hni
ENSCAPG00000014785	-	88	90.741	ENSORLG00015018545	unkl	72	90.741	Oryzias_latipes_hsok
ENSCAPG00000014785	-	88	89.815	ENSOMEG00000023985	unkl	72	89.815	Oryzias_melastigma
ENSCAPG00000014785	-	93	62.384	ENSOARG00000015636	-	86	62.074	Ovis_aries
ENSCAPG00000014785	-	93	75.281	ENSPPAG00000043365	-	100	74.375	Pan_paniscus
ENSCAPG00000014785	-	93	69.735	ENSPPRG00000018472	-	90	71.695	Panthera_pardus
ENSCAPG00000014785	-	73	74.542	ENSPTIG00000000863	-	77	76.122	Panthera_tigris_altaica
ENSCAPG00000014785	-	93	79.375	ENSPTRG00000007591	UNKL	87	80.000	Pan_troglodytes
ENSCAPG00000014785	-	93	78.683	ENSPANG00000015754	-	87	79.154	Papio_anubis
ENSCAPG00000014785	-	93	54.962	ENSPKIG00000006764	-	100	50.933	Paramormyrops_kingsleyae
ENSCAPG00000014785	-	89	89.352	ENSPKIG00000002101	unkl	80	89.352	Paramormyrops_kingsleyae
ENSCAPG00000014785	-	58	75.000	ENSPSIG00000011268	-	77	75.000	Pelodiscus_sinensis
ENSCAPG00000014785	-	93	61.164	ENSPMGG00000020856	unkl	87	61.321	Periophthalmus_magnuspinnatus
ENSCAPG00000014785	-	93	81.043	ENSPEMG00000008937	Unkl	87	80.411	Peromyscus_maniculatus_bairdii
ENSCAPG00000014785	-	90	88.596	ENSPCIG00000015633	-	82	88.596	Phascolarctos_cinereus
ENSCAPG00000014785	-	88	88.889	ENSPFOG00000010836	unkl	72	88.889	Poecilia_formosa
ENSCAPG00000014785	-	88	88.889	ENSPLAG00000002294	unkl	72	88.889	Poecilia_latipinna
ENSCAPG00000014785	-	88	88.889	ENSPMEG00000019000	unkl	72	88.889	Poecilia_mexicana
ENSCAPG00000014785	-	88	88.889	ENSPREG00000007918	unkl	72	88.889	Poecilia_reticulata
ENSCAPG00000014785	-	84	84.878	ENSPPYG00000006950	-	89	86.829	Pongo_abelii
ENSCAPG00000014785	-	93	79.278	ENSPCOG00000017889	-	87	77.294	Propithecus_coquereli
ENSCAPG00000014785	-	88	88.889	ENSPNYG00000008111	unkl	72	88.889	Pundamilia_nyererei
ENSCAPG00000014785	-	88	90.741	ENSPNAG00000010422	unkl	72	90.741	Pygocentrus_nattereri
ENSCAPG00000014785	-	93	81.546	ENSRNOG00000054605	Unkl	87	81.043	Rattus_norvegicus
ENSCAPG00000014785	-	93	66.144	ENSRBIG00000040235	-	86	65.047	Rhinopithecus_bieti
ENSCAPG00000014785	-	93	78.906	ENSRROG00000029341	-	90	79.531	Rhinopithecus_roxellana
ENSCAPG00000014785	-	93	78.906	ENSSBOG00000031173	-	90	79.062	Saimiri_boliviensis_boliviensis
ENSCAPG00000014785	-	90	88.546	ENSSHAG00000008411	-	75	88.546	Sarcophilus_harrisii
ENSCAPG00000014785	-	89	89.498	ENSSFOG00015018904	unkl	78	89.498	Scleropages_formosus
ENSCAPG00000014785	-	93	60.802	ENSSMAG00000005106	unkl	87	60.802	Scophthalmus_maximus
ENSCAPG00000014785	-	88	90.278	ENSSDUG00000019045	unkl	72	90.278	Seriola_dumerili
ENSCAPG00000014785	-	88	90.278	ENSSLDG00000010672	unkl	72	90.278	Seriola_lalandi_dorsalis
ENSCAPG00000014785	-	83	86.463	ENSSPUG00000009763	-	71	86.463	Sphenodon_punctatus
ENSCAPG00000014785	-	88	89.815	ENSSPAG00000017109	unkl	72	89.815	Stegastes_partitus
ENSCAPG00000014785	-	93	75.307	ENSSSCG00000022963	-	87	75.460	Sus_scrofa
ENSCAPG00000014785	-	89	89.767	ENSTRUG00000012086	unkl	72	89.767	Takifugu_rubripes
ENSCAPG00000014785	-	92	82.627	ENSTNIG00000018588	unkl	76	82.278	Tetraodon_nigroviridis
ENSCAPG00000014785	-	75	92.188	ENSVVUG00000011182	-	73	92.188	Vulpes_vulpes
ENSCAPG00000014785	-	93	63.976	ENSXETG00000021599	unkl	88	63.976	Xenopus_tropicalis
ENSCAPG00000014785	-	93	60.643	ENSXCOG00000016491	unkl	88	60.643	Xiphophorus_couchianus
ENSCAPG00000014785	-	93	58.525	ENSXMAG00000009520	unkl	87	58.525	Xiphophorus_maculatus