EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000014864 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 20657 bases
Position: chrAVPZ01000578.1:8758568-8779224
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014535	ResIII	PF04851.15	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018306	CHD3-201	5892	-	ENSCAPP00000014535	1963 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000014864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000014864	CHD3	94	66.632	ENSCAPG00000009294	CHD5	98	67.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014864	CHD3	99	94.932	ENSG00000170004	CHD3	99	97.538	Homo_sapiens
ENSCAPG00000014864	CHD3	78	82.447	ENSAPOG00000005614	chd3	94	82.447	Acanthochromis_polyacanthus
ENSCAPG00000014864	CHD3	67	93.182	ENSAMEG00000003025	-	100	93.182	Ailuropoda_melanoleuca
ENSCAPG00000014864	CHD3	80	79.798	ENSACIG00000019671	chd3	99	79.798	Amphilophus_citrinellus
ENSCAPG00000014864	CHD3	89	79.070	ENSAOCG00000023784	chd3	97	81.152	Amphiprion_ocellaris
ENSCAPG00000014864	CHD3	89	78.405	ENSAPEG00000006341	chd3	96	70.522	Amphiprion_percula
ENSCAPG00000014864	CHD3	96	69.124	ENSATEG00000000848	chd3	99	70.733	Anabas_testudineus
ENSCAPG00000014864	CHD3	97	82.822	ENSACAG00000004276	CHD3	96	81.928	Anolis_carolinensis
ENSCAPG00000014864	CHD3	99	93.619	ENSANAG00000034323	CHD3	99	95.515	Aotus_nancymaae
ENSCAPG00000014864	CHD3	90	80.707	ENSACLG00000009222	chd3	99	70.885	Astatotilapia_calliptera
ENSCAPG00000014864	CHD3	98	94.878	ENSBTAG00000014377	CHD3	97	94.852	Bos_taurus
ENSCAPG00000014864	CHD3	99	95.005	ENSCJAG00000014766	CHD3	99	94.634	Callithrix_jacchus
ENSCAPG00000014864	CHD3	99	94.330	ENSCAFG00000016859	CHD3	99	94.330	Canis_familiaris
ENSCAPG00000014864	CHD3	94	94.832	ENSCAFG00020007422	CHD3	100	94.926	Canis_lupus_dingo
ENSCAPG00000014864	CHD3	99	94.896	ENSCHIG00000016737	CHD3	100	94.896	Capra_hircus
ENSCAPG00000014864	CHD3	99	94.782	ENSTSYG00000035658	CHD3	99	94.782	Carlito_syrichta
ENSCAPG00000014864	CHD3	100	97.404	ENSCPOG00000022653	CHD3	100	97.404	Cavia_porcellus
ENSCAPG00000014864	CHD3	99	94.631	ENSCCAG00000034792	CHD3	99	94.631	Cebus_capucinus
ENSCAPG00000014864	CHD3	99	94.681	ENSCATG00000041717	CHD3	99	94.681	Cercocebus_atys
ENSCAPG00000014864	CHD3	98	95.780	ENSCLAG00000010523	CHD3	100	95.780	Chinchilla_lanigera
ENSCAPG00000014864	CHD3	98	95.224	ENSCSAG00000011122	CHD3	99	95.224	Chlorocebus_sabaeus
ENSCAPG00000014864	CHD3	89	80.381	ENSCPBG00000011966	CHD3	99	83.529	Chrysemys_picta_bellii
ENSCAPG00000014864	CHD3	99	94.631	ENSCANG00000037641	CHD3	99	94.631	Colobus_angolensis_palliatus
ENSCAPG00000014864	CHD3	98	94.665	ENSCGRG00001011306	Chd3	100	94.665	Cricetulus_griseus_chok1gshd
ENSCAPG00000014864	CHD3	92	97.059	ENSCGRG00000007878	Chd3	99	97.059	Cricetulus_griseus_crigri
ENSCAPG00000014864	CHD3	89	79.868	ENSCSEG00000004489	chd3	99	75.595	Cynoglossus_semilaevis
ENSCAPG00000014864	CHD3	85	82.927	ENSCVAG00000007293	chd3	95	82.927	Cyprinodon_variegatus
ENSCAPG00000014864	CHD3	90	82.215	ENSDARG00000021405	chd3	99	72.827	Danio_rerio
ENSCAPG00000014864	CHD3	98	80.222	ENSDNOG00000047846	CHD3	99	79.667	Dasypus_novemcinctus
ENSCAPG00000014864	CHD3	98	94.611	ENSDORG00000010713	Chd3	100	94.611	Dipodomys_ordii
ENSCAPG00000014864	CHD3	96	90.607	ENSETEG00000017733	CHD3	100	90.607	Echinops_telfairi
ENSCAPG00000014864	CHD3	74	66.879	ENSEBUG00000008310	chd3	99	67.625	Eptatretus_burgeri
ENSCAPG00000014864	CHD3	91	95.090	ENSEASG00005019360	CHD3	100	95.090	Equus_asinus_asinus
ENSCAPG00000014864	CHD3	91	95.145	ENSECAG00000010051	CHD3	100	95.145	Equus_caballus
ENSCAPG00000014864	CHD3	91	98.305	ENSEEUG00000015205	CHD3	93	98.305	Erinaceus_europaeus
ENSCAPG00000014864	CHD3	80	73.548	ENSELUG00000019499	chd3	99	73.880	Esox_lucius
ENSCAPG00000014864	CHD3	98	94.817	ENSFCAG00000009629	CHD3	96	94.817	Felis_catus
ENSCAPG00000014864	CHD3	99	93.121	ENSFDAG00000008220	CHD3	99	93.121	Fukomys_damarensis
ENSCAPG00000014864	CHD3	87	75.736	ENSGMOG00000013599	chd3	91	76.345	Gadus_morhua
ENSCAPG00000014864	CHD3	57	70.563	ENSGAFG00000004055	chd3	99	72.650	Gambusia_affinis
ENSCAPG00000014864	CHD3	97	68.544	ENSGACG00000019275	chd3	100	68.408	Gasterosteus_aculeatus
ENSCAPG00000014864	CHD3	74	82.298	ENSGAGG00000013164	CHD3	98	82.632	Gopherus_agassizii
ENSCAPG00000014864	CHD3	99	94.932	ENSGGOG00000013496	CHD3	99	94.932	Gorilla_gorilla
ENSCAPG00000014864	CHD3	98	95.681	ENSHGLG00000012017	CHD3	99	95.681	Heterocephalus_glaber_female
ENSCAPG00000014864	CHD3	88	91.159	ENSHGLG00100013902	CHD3	97	91.159	Heterocephalus_glaber_male
ENSCAPG00000014864	CHD3	93	69.964	ENSHCOG00000010170	chd3	96	70.723	Hippocampus_comes
ENSCAPG00000014864	CHD3	82	76.466	ENSIPUG00000003271	chd3	94	76.039	Ictalurus_punctatus
ENSCAPG00000014864	CHD3	99	94.584	ENSSTOG00000025907	CHD3	99	95.328	Ictidomys_tridecemlineatus
ENSCAPG00000014864	CHD3	99	93.581	ENSJJAG00000017633	Chd3	100	94.357	Jaculus_jaculus
ENSCAPG00000014864	CHD3	85	90.047	ENSKMAG00000019292	chd3	97	72.149	Kryptolebias_marmoratus
ENSCAPG00000014864	CHD3	95	66.546	ENSLBEG00000028485	chd3	91	87.826	Labrus_bergylta
ENSCAPG00000014864	CHD3	95	71.537	ENSLACG00000008031	CHD3	98	70.960	Latimeria_chalumnae
ENSCAPG00000014864	CHD3	96	74.449	ENSLOCG00000013965	chd3	97	74.988	Lepisosteus_oculatus
ENSCAPG00000014864	CHD3	90	94.355	ENSLAFG00000000572	CHD3	100	90.885	Loxodonta_africana
ENSCAPG00000014864	CHD3	99	94.681	ENSMFAG00000020113	CHD3	99	94.681	Macaca_fascicularis
ENSCAPG00000014864	CHD3	99	92.323	ENSMMUG00000022221	CHD3	99	92.323	Macaca_mulatta
ENSCAPG00000014864	CHD3	99	94.631	ENSMNEG00000001728	CHD3	99	94.757	Macaca_nemestrina
ENSCAPG00000014864	CHD3	99	94.681	ENSMLEG00000032249	CHD3	99	94.681	Mandrillus_leucophaeus
ENSCAPG00000014864	CHD3	84	72.583	ENSMAMG00000000564	chd3	99	72.913	Mastacembelus_armatus
ENSCAPG00000014864	CHD3	99	93.993	ENSMAUG00000013873	Chd3	97	93.993	Mesocricetus_auratus
ENSCAPG00000014864	CHD3	98	95.376	ENSMICG00000008741	CHD3	96	95.376	Microcebus_murinus
ENSCAPG00000014864	CHD3	98	94.756	ENSMOCG00000004848	Chd3	100	94.756	Microtus_ochrogaster
ENSCAPG00000014864	CHD3	94	72.095	ENSMMOG00000012699	chd3	99	71.436	Mola_mola
ENSCAPG00000014864	CHD3	91	89.804	ENSMODG00000007509	CHD3	100	89.804	Monodelphis_domestica
ENSCAPG00000014864	CHD3	99	93.703	MGP_CAROLIEiJ_G0016564	Chd3	100	92.708	Mus_caroli
ENSCAPG00000014864	CHD3	99	93.854	ENSMUSG00000018474	Chd3	99	92.865	Mus_musculus
ENSCAPG00000014864	CHD3	99	93.901	MGP_PahariEiJ_G0017695	Chd3	100	92.913	Mus_pahari
ENSCAPG00000014864	CHD3	99	93.854	MGP_SPRETEiJ_G0017400	Chd3	100	92.865	Mus_spretus
ENSCAPG00000014864	CHD3	85	94.632	ENSMPUG00000008861	CHD3	100	94.632	Mustela_putorius_furo
ENSCAPG00000014864	CHD3	99	93.337	ENSMLUG00000014643	-	99	93.337	Myotis_lucifugus
ENSCAPG00000014864	CHD3	98	95.071	ENSNGAG00000000773	Chd3	98	95.071	Nannospalax_galili
ENSCAPG00000014864	CHD3	84	72.183	ENSNBRG00000000636	chd3	97	72.770	Neolamprologus_brichardi
ENSCAPG00000014864	CHD3	99	91.840	ENSNLEG00000009770	CHD3	100	93.032	Nomascus_leucogenys
ENSCAPG00000014864	CHD3	81	97.778	ENSMEUG00000005852	CHD3	83	97.778	Notamacropus_eugenii
ENSCAPG00000014864	CHD3	93	93.540	ENSOPRG00000011069	CHD3	100	93.540	Ochotona_princeps
ENSCAPG00000014864	CHD3	99	94.673	ENSODEG00000017785	CHD3	100	94.673	Octodon_degus
ENSCAPG00000014864	CHD3	74	74.391	ENSONIG00000009292	chd3	100	71.582	Oreochromis_niloticus
ENSCAPG00000014864	CHD3	98	90.646	ENSOCUG00000029299	CHD3	100	90.646	Oryctolagus_cuniculus
ENSCAPG00000014864	CHD3	81	67.730	ENSORLG00000007107	chd3	93	67.793	Oryzias_latipes
ENSCAPG00000014864	CHD3	55	68.314	ENSORLG00020008387	chd3	95	69.373	Oryzias_latipes_hni
ENSCAPG00000014864	CHD3	69	76.429	ENSOMEG00000013691	chd3	99	74.342	Oryzias_melastigma
ENSCAPG00000014864	CHD3	98	94.972	ENSOGAG00000003216	CHD3	99	94.972	Otolemur_garnettii
ENSCAPG00000014864	CHD3	99	92.583	ENSOARG00000017855	CHD3	99	92.583	Ovis_aries
ENSCAPG00000014864	CHD3	99	92.631	ENSPPAG00000032886	CHD3	99	92.631	Pan_paniscus
ENSCAPG00000014864	CHD3	99	94.330	ENSPPRG00000000626	CHD3	99	94.330	Panthera_pardus
ENSCAPG00000014864	CHD3	99	94.982	ENSPTRG00000008714	CHD3	99	94.982	Pan_troglodytes
ENSCAPG00000014864	CHD3	99	94.681	ENSPANG00000023938	CHD3	99	94.681	Papio_anubis
ENSCAPG00000014864	CHD3	97	72.695	ENSPKIG00000006305	chd3	99	75.464	Paramormyrops_kingsleyae
ENSCAPG00000014864	CHD3	53	85.858	ENSPSIG00000010177	CHD3	98	86.223	Pelodiscus_sinensis
ENSCAPG00000014864	CHD3	99	94.290	ENSPEMG00000014262	Chd3	99	94.290	Peromyscus_maniculatus_bairdii
ENSCAPG00000014864	CHD3	98	89.944	ENSPCIG00000005442	CHD3	97	96.296	Phascolarctos_cinereus
ENSCAPG00000014864	CHD3	94	69.919	ENSPFOG00000012464	chd3	92	71.170	Poecilia_formosa
ENSCAPG00000014864	CHD3	86	83.333	ENSPLAG00000002887	chd3	98	68.260	Poecilia_latipinna
ENSCAPG00000014864	CHD3	51	75.320	ENSPMEG00000016725	chd3	94	69.264	Poecilia_mexicana
ENSCAPG00000014864	CHD3	89	80.488	ENSPREG00000011044	chd3	99	75.179	Poecilia_reticulata
ENSCAPG00000014864	CHD3	99	90.166	ENSPPYG00000007940	CHD3	99	90.166	Pongo_abelii
ENSCAPG00000014864	CHD3	94	95.896	ENSPCAG00000004350	CHD3	96	95.709	Procavia_capensis
ENSCAPG00000014864	CHD3	99	94.483	ENSPCOG00000020952	CHD3	99	94.483	Propithecus_coquereli
ENSCAPG00000014864	CHD3	86	96.651	ENSPVAG00000016344	CHD3	87	96.651	Pteropus_vampyrus
ENSCAPG00000014864	CHD3	93	74.692	ENSPNAG00000020393	chd3	98	79.452	Pygocentrus_nattereri
ENSCAPG00000014864	CHD3	91	93.682	ENSRNOG00000009722	Chd3	100	93.682	Rattus_norvegicus
ENSCAPG00000014864	CHD3	99	91.625	ENSRBIG00000033562	CHD3	99	91.864	Rhinopithecus_bieti
ENSCAPG00000014864	CHD3	99	93.126	ENSRROG00000029554	CHD3	100	93.424	Rhinopithecus_roxellana
ENSCAPG00000014864	CHD3	99	94.782	ENSSBOG00000020719	CHD3	99	94.921	Saimiri_boliviensis_boliviensis
ENSCAPG00000014864	CHD3	98	90.561	ENSSHAG00000014412	CHD3	100	90.561	Sarcophilus_harrisii
ENSCAPG00000014864	CHD3	89	71.236	ENSSFOG00015023123	chd3	98	71.558	Scleropages_formosus
ENSCAPG00000014864	CHD3	77	91.304	ENSSMAG00000006451	chd3	99	72.503	Scophthalmus_maximus
ENSCAPG00000014864	CHD3	53	68.132	ENSSDUG00000005792	chd3	95	69.322	Seriola_dumerili
ENSCAPG00000014864	CHD3	89	79.798	ENSSPAG00000013694	chd3	99	80.928	Stegastes_partitus
ENSCAPG00000014864	CHD3	98	95.231	ENSSSCG00000021363	CHD3	100	95.147	Sus_scrofa
ENSCAPG00000014864	CHD3	73	73.307	ENSTRUG00000014990	chd3	89	72.889	Takifugu_rubripes
ENSCAPG00000014864	CHD3	96	70.276	ENSTNIG00000012998	chd3	99	69.990	Tetraodon_nigroviridis
ENSCAPG00000014864	CHD3	63	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCAPG00000014864	CHD3	97	97.222	ENSTTRG00000010295	CHD3	97	97.222	Tursiops_truncatus
ENSCAPG00000014864	CHD3	91	94.774	ENSUAMG00000005475	CHD3	99	94.774	Ursus_americanus
ENSCAPG00000014864	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCAPG00000014864	CHD3	94	94.832	ENSVVUG00000028011	CHD3	99	94.832	Vulpes_vulpes
ENSCAPG00000014864	CHD3	97	71.959	ENSXETG00000012991	chd3	97	70.823	Xenopus_tropicalis
ENSCAPG00000014864	CHD3	50	77.001	ENSXCOG00000000809	chd3	96	77.565	Xiphophorus_couchianus
ENSCAPG00000014864	CHD3	77	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus