EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000014921 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 7964 bases
Position: chrAVPZ01000955.1:3517649-3525612
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014647	CPSF_A	PF03178.15	7.8e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018420	CPSF1-201	4179	-	ENSCAPP00000014647	1392 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000014921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000014921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000014921	CPSF1	99	95.272	ENSG00000071894	CPSF1	97	95.272	Homo_sapiens
ENSCAPG00000014921	CPSF1	99	77.469	ENSAPOG00000019621	cpsf1	99	77.608	Acanthochromis_polyacanthus
ENSCAPG00000014921	CPSF1	99	93.848	ENSAMEG00000005557	CPSF1	99	93.848	Ailuropoda_melanoleuca
ENSCAPG00000014921	CPSF1	99	77.897	ENSACIG00000006112	cpsf1	97	78.112	Amphilophus_citrinellus
ENSCAPG00000014921	CPSF1	99	78.734	ENSAOCG00000007120	cpsf1	97	78.947	Amphiprion_ocellaris
ENSCAPG00000014921	CPSF1	99	79.217	ENSAPEG00000005755	cpsf1	97	79.359	Amphiprion_percula
ENSCAPG00000014921	CPSF1	98	77.841	ENSATEG00000011097	cpsf1	99	77.393	Anabas_testudineus
ENSCAPG00000014921	CPSF1	92	79.861	ENSACAG00000009655	CPSF1	96	79.861	Anolis_carolinensis
ENSCAPG00000014921	CPSF1	99	95.341	ENSANAG00000036514	CPSF1	97	95.341	Aotus_nancymaae
ENSCAPG00000014921	CPSF1	98	78.169	ENSACLG00000012231	cpsf1	99	78.099	Astatotilapia_calliptera
ENSCAPG00000014921	CPSF1	99	73.295	ENSAMXG00000008485	cpsf1	96	73.116	Astyanax_mexicanus
ENSCAPG00000014921	CPSF1	99	93.460	ENSBTAG00000008355	CPSF1	99	94.614	Bos_taurus
ENSCAPG00000014921	CPSF1	97	32.702	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSCAPG00000014921	CPSF1	99	95.197	ENSCJAG00000021421	CPSF1	97	95.197	Callithrix_jacchus
ENSCAPG00000014921	CPSF1	99	95.276	ENSCAFG00000001600	CPSF1	100	96.658	Canis_familiaris
ENSCAPG00000014921	CPSF1	99	95.204	ENSCAFG00020020821	CPSF1	97	95.204	Canis_lupus_dingo
ENSCAPG00000014921	CPSF1	99	89.451	ENSCHIG00000015833	CPSF1	97	89.451	Capra_hircus
ENSCAPG00000014921	CPSF1	99	96.129	ENSTSYG00000028560	CPSF1	97	96.129	Carlito_syrichta
ENSCAPG00000014921	CPSF1	99	99.349	ENSCPOG00000011448	CPSF1	97	99.349	Cavia_porcellus
ENSCAPG00000014921	CPSF1	99	95.412	ENSCCAG00000037658	CPSF1	97	95.412	Cebus_capucinus
ENSCAPG00000014921	CPSF1	99	95.054	ENSCATG00000037234	CPSF1	97	95.054	Cercocebus_atys
ENSCAPG00000014921	CPSF1	99	98.063	ENSCLAG00000012166	CPSF1	97	98.063	Chinchilla_lanigera
ENSCAPG00000014921	CPSF1	99	95.197	ENSCSAG00000008502	CPSF1	97	95.197	Chlorocebus_sabaeus
ENSCAPG00000014921	CPSF1	98	86.575	ENSCPBG00000018910	CPSF1	93	86.575	Chrysemys_picta_bellii
ENSCAPG00000014921	CPSF1	95	47.810	ENSCING00000000514	-	97	47.661	Ciona_intestinalis
ENSCAPG00000014921	CPSF1	99	47.650	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSCAPG00000014921	CPSF1	99	91.183	ENSCANG00000032760	CPSF1	100	89.352	Colobus_angolensis_palliatus
ENSCAPG00000014921	CPSF1	99	96.126	ENSCGRG00001016344	Cpsf1	97	96.126	Cricetulus_griseus_chok1gshd
ENSCAPG00000014921	CPSF1	99	93.902	ENSCGRG00000003118	Cpsf1	97	93.902	Cricetulus_griseus_crigri
ENSCAPG00000014921	CPSF1	99	78.186	ENSCSEG00000013464	cpsf1	99	78.052	Cynoglossus_semilaevis
ENSCAPG00000014921	CPSF1	88	77.045	ENSCVAG00000014059	cpsf1	100	75.463	Cyprinodon_variegatus
ENSCAPG00000014921	CPSF1	98	79.513	ENSDARG00000034178	cpsf1	97	78.809	Danio_rerio
ENSCAPG00000014921	CPSF1	51	95.942	ENSDNOG00000043654	CPSF1	85	95.942	Dasypus_novemcinctus
ENSCAPG00000014921	CPSF1	99	95.481	ENSDORG00000006278	Cpsf1	99	95.484	Dipodomys_ordii
ENSCAPG00000014921	CPSF1	98	44.219	FBgn0024698	Cpsf160	96	44.320	Drosophila_melanogaster
ENSCAPG00000014921	CPSF1	79	97.987	ENSETEG00000006022	CPSF1	79	97.987	Echinops_telfairi
ENSCAPG00000014921	CPSF1	99	95.968	ENSEASG00005010774	CPSF1	97	95.777	Equus_asinus_asinus
ENSCAPG00000014921	CPSF1	99	96.040	ENSECAG00000022209	CPSF1	97	95.848	Equus_caballus
ENSCAPG00000014921	CPSF1	98	94.360	ENSEEUG00000000471	CPSF1	96	94.360	Erinaceus_europaeus
ENSCAPG00000014921	CPSF1	99	77.502	ENSELUG00000012271	cpsf1	99	78.154	Esox_lucius
ENSCAPG00000014921	CPSF1	99	97.776	ENSFDAG00000016060	CPSF1	97	97.776	Fukomys_damarensis
ENSCAPG00000014921	CPSF1	99	76.157	ENSFHEG00000016801	cpsf1	97	76.228	Fundulus_heteroclitus
ENSCAPG00000014921	CPSF1	99	77.224	ENSGMOG00000000796	cpsf1	97	77.438	Gadus_morhua
ENSCAPG00000014921	CPSF1	94	83.929	ENSGAFG00000018890	cpsf1	96	83.929	Gambusia_affinis
ENSCAPG00000014921	CPSF1	99	77.833	ENSGACG00000008703	cpsf1	100	75.500	Gasterosteus_aculeatus
ENSCAPG00000014921	CPSF1	99	82.771	ENSGAGG00000004276	CPSF1	97	86.746	Gopherus_agassizii
ENSCAPG00000014921	CPSF1	99	95.194	ENSGGOG00000016185	CPSF1	97	95.194	Gorilla_gorilla
ENSCAPG00000014921	CPSF1	99	79.185	ENSHBUG00000018900	cpsf1	97	79.328	Haplochromis_burtoni
ENSCAPG00000014921	CPSF1	99	97.848	ENSHGLG00000016139	CPSF1	97	97.848	Heterocephalus_glaber_female
ENSCAPG00000014921	CPSF1	99	97.776	ENSHGLG00100009750	CPSF1	97	97.776	Heterocephalus_glaber_male
ENSCAPG00000014921	CPSF1	99	76.681	ENSHCOG00000018509	cpsf1	97	76.804	Hippocampus_comes
ENSCAPG00000014921	CPSF1	98	75.966	ENSIPUG00000011259	cpsf1	97	75.586	Ictalurus_punctatus
ENSCAPG00000014921	CPSF1	99	95.875	ENSSTOG00000009957	CPSF1	99	95.875	Ictidomys_tridecemlineatus
ENSCAPG00000014921	CPSF1	99	95.983	ENSJJAG00000023002	Cpsf1	97	95.983	Jaculus_jaculus
ENSCAPG00000014921	CPSF1	90	85.580	ENSKMAG00000001940	cpsf1	96	85.580	Kryptolebias_marmoratus
ENSCAPG00000014921	CPSF1	99	76.412	ENSLBEG00000003601	cpsf1	97	76.783	Labrus_bergylta
ENSCAPG00000014921	CPSF1	83	81.731	ENSLACG00000000233	CPSF1	84	81.731	Latimeria_chalumnae
ENSCAPG00000014921	CPSF1	99	76.814	ENSLOCG00000008484	cpsf1	97	77.098	Lepisosteus_oculatus
ENSCAPG00000014921	CPSF1	99	94.130	ENSLAFG00000022601	CPSF1	100	94.130	Loxodonta_africana
ENSCAPG00000014921	CPSF1	99	95.054	ENSMFAG00000037013	CPSF1	97	95.054	Macaca_fascicularis
ENSCAPG00000014921	CPSF1	99	95.125	ENSMMUG00000007380	CPSF1	97	95.125	Macaca_mulatta
ENSCAPG00000014921	CPSF1	99	95.265	ENSMNEG00000043564	CPSF1	100	95.265	Macaca_nemestrina
ENSCAPG00000014921	CPSF1	99	95.054	ENSMLEG00000043010	CPSF1	97	95.054	Mandrillus_leucophaeus
ENSCAPG00000014921	CPSF1	98	78.218	ENSMAMG00000003803	cpsf1	99	77.809	Mastacembelus_armatus
ENSCAPG00000014921	CPSF1	98	78.010	ENSMZEG00005001168	cpsf1	97	78.154	Maylandia_zebra
ENSCAPG00000014921	CPSF1	99	95.839	ENSMAUG00000003601	Cpsf1	97	95.839	Mesocricetus_auratus
ENSCAPG00000014921	CPSF1	99	95.839	ENSMICG00000015767	CPSF1	97	95.839	Microcebus_murinus
ENSCAPG00000014921	CPSF1	99	96.126	ENSMOCG00000022758	Cpsf1	97	96.126	Microtus_ochrogaster
ENSCAPG00000014921	CPSF1	99	78.736	ENSMMOG00000021245	cpsf1	96	78.879	Mola_mola
ENSCAPG00000014921	CPSF1	99	92.280	ENSMODG00000010755	CPSF1	97	92.280	Monodelphis_domestica
ENSCAPG00000014921	CPSF1	99	77.149	ENSMALG00000020545	cpsf1	97	77.289	Monopterus_albus
ENSCAPG00000014921	CPSF1	99	96.485	MGP_CAROLIEiJ_G0019936	Cpsf1	97	96.485	Mus_caroli
ENSCAPG00000014921	CPSF1	99	96.341	ENSMUSG00000034022	Cpsf1	97	96.341	Mus_musculus
ENSCAPG00000014921	CPSF1	99	96.341	MGP_PahariEiJ_G0019946	Cpsf1	97	96.341	Mus_pahari
ENSCAPG00000014921	CPSF1	99	96.413	MGP_SPRETEiJ_G0020839	Cpsf1	97	96.413	Mus_spretus
ENSCAPG00000014921	CPSF1	96	95.281	ENSMPUG00000006419	CPSF1	92	95.281	Mustela_putorius_furo
ENSCAPG00000014921	CPSF1	99	95.624	ENSNGAG00000022460	Cpsf1	97	95.624	Nannospalax_galili
ENSCAPG00000014921	CPSF1	98	74.946	ENSNBRG00000000813	cpsf1	96	74.946	Neolamprologus_brichardi
ENSCAPG00000014921	CPSF1	84	82.080	ENSNLEG00000010633	-	100	88.889	Nomascus_leucogenys
ENSCAPG00000014921	CPSF1	84	98.256	ENSMEUG00000014922	CPSF1	85	98.256	Notamacropus_eugenii
ENSCAPG00000014921	CPSF1	63	96.429	ENSOPRG00000004693	-	71	96.429	Ochotona_princeps
ENSCAPG00000014921	CPSF1	99	98.063	ENSODEG00000013995	CPSF1	97	98.063	Octodon_degus
ENSCAPG00000014921	CPSF1	99	79.542	ENSONIG00000007676	cpsf1	97	79.685	Oreochromis_niloticus
ENSCAPG00000014921	CPSF1	60	92.143	ENSOANG00000010716	CPSF1	88	92.143	Ornithorhynchus_anatinus
ENSCAPG00000014921	CPSF1	98	77.266	ENSORLG00000013544	cpsf1	92	86.831	Oryzias_latipes
ENSCAPG00000014921	CPSF1	98	77.408	ENSORLG00020021693	cpsf1	92	86.831	Oryzias_latipes_hni
ENSCAPG00000014921	CPSF1	98	77.337	ENSORLG00015009979	cpsf1	97	76.826	Oryzias_latipes_hsok
ENSCAPG00000014921	CPSF1	98	77.234	ENSOMEG00000011849	cpsf1	97	76.934	Oryzias_melastigma
ENSCAPG00000014921	CPSF1	99	95.771	ENSOGAG00000000315	CPSF1	97	95.771	Otolemur_garnettii
ENSCAPG00000014921	CPSF1	99	95.269	ENSPPAG00000019280	CPSF1	97	95.269	Pan_paniscus
ENSCAPG00000014921	CPSF1	99	95.269	ENSPTRG00000049288	-	97	95.269	Pan_troglodytes
ENSCAPG00000014921	CPSF1	99	93.592	ENSPTRG00000051253	-	97	93.592	Pan_troglodytes
ENSCAPG00000014921	CPSF1	99	95.122	ENSPANG00000015005	CPSF1	100	95.122	Papio_anubis
ENSCAPG00000014921	CPSF1	99	80.706	ENSPKIG00000002582	cpsf1	100	81.335	Paramormyrops_kingsleyae
ENSCAPG00000014921	CPSF1	99	92.209	ENSPCIG00000009035	CPSF1	97	92.209	Phascolarctos_cinereus
ENSCAPG00000014921	CPSF1	99	76.031	ENSPFOG00000012870	cpsf1	97	76.031	Poecilia_formosa
ENSCAPG00000014921	CPSF1	99	75.908	ENSPREG00000016307	cpsf1	97	75.908	Poecilia_reticulata
ENSCAPG00000014921	CPSF1	99	86.953	ENSPPYG00000018973	CPSF1	96	86.953	Pongo_abelii
ENSCAPG00000014921	CPSF1	93	95.170	ENSPCAG00000011541	CPSF1	94	95.170	Procavia_capensis
ENSCAPG00000014921	CPSF1	99	91.828	ENSPCOG00000020001	CPSF1	100	90.278	Propithecus_coquereli
ENSCAPG00000014921	CPSF1	89	99.143	ENSPVAG00000006761	CPSF1	88	99.143	Pteropus_vampyrus
ENSCAPG00000014921	CPSF1	99	78.123	ENSPNYG00000004906	cpsf1	99	78.239	Pundamilia_nyererei
ENSCAPG00000014921	CPSF1	99	74.570	ENSPNAG00000024395	cpsf1	97	74.570	Pygocentrus_nattereri
ENSCAPG00000014921	CPSF1	99	96.413	ENSRNOG00000030705	Cpsf1	97	96.413	Rattus_norvegicus
ENSCAPG00000014921	CPSF1	99	95.054	ENSRBIG00000044907	CPSF1	97	95.054	Rhinopithecus_bieti
ENSCAPG00000014921	CPSF1	99	94.982	ENSRROG00000044861	CPSF1	97	94.982	Rhinopithecus_roxellana
ENSCAPG00000014921	CPSF1	99	95.265	ENSSBOG00000027177	CPSF1	100	95.265	Saimiri_boliviensis_boliviensis
ENSCAPG00000014921	CPSF1	99	92.137	ENSSHAG00000006500	CPSF1	97	92.137	Sarcophilus_harrisii
ENSCAPG00000014921	CPSF1	97	80.882	ENSSFOG00015004606	cpsf1	99	80.956	Scleropages_formosus
ENSCAPG00000014921	CPSF1	99	77.428	ENSSMAG00000020547	cpsf1	97	77.498	Scophthalmus_maximus
ENSCAPG00000014921	CPSF1	98	79.524	ENSSDUG00000001100	cpsf1	96	79.885	Seriola_dumerili
ENSCAPG00000014921	CPSF1	98	79.654	ENSSLDG00000003619	cpsf1	96	79.798	Seriola_lalandi_dorsalis
ENSCAPG00000014921	CPSF1	89	93.209	ENSSARG00000003643	CPSF1	88	93.209	Sorex_araneus
ENSCAPG00000014921	CPSF1	98	86.157	ENSSPUG00000014396	CPSF1	100	86.157	Sphenodon_punctatus
ENSCAPG00000014921	CPSF1	99	77.514	ENSSPAG00000005349	cpsf1	97	77.654	Stegastes_partitus
ENSCAPG00000014921	CPSF1	99	94.384	ENSSSCG00000005906	CPSF1	97	94.273	Sus_scrofa
ENSCAPG00000014921	CPSF1	99	76.961	ENSTRUG00000013134	cpsf1	99	77.101	Takifugu_rubripes
ENSCAPG00000014921	CPSF1	99	77.928	ENSTNIG00000014027	cpsf1	97	77.999	Tetraodon_nigroviridis
ENSCAPG00000014921	CPSF1	76	91.128	ENSTBEG00000001756	CPSF1	91	91.128	Tupaia_belangeri
ENSCAPG00000014921	CPSF1	89	97.064	ENSTTRG00000001937	CPSF1	86	97.064	Tursiops_truncatus
ENSCAPG00000014921	CPSF1	99	95.429	ENSUAMG00000006476	CPSF1	98	95.429	Ursus_americanus
ENSCAPG00000014921	CPSF1	99	77.754	ENSXCOG00000003608	cpsf1	96	78.114	Xiphophorus_couchianus
ENSCAPG00000014921	CPSF1	99	77.283	ENSXMAG00000005798	cpsf1	96	77.498	Xiphophorus_maculatus