EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015039 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 16592 bases
Position: chrAVPZ01000211.1:3243369-3259960
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014741	CSD	PF00313.22	2.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018515	YBX3-201	924	-	ENSCAPP00000014741	307 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015039	YBX3	93	86.760	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSCAPG00000015039	YBX3	93	90.559	ENSAMEG00000009393	YBX3	81	90.559	Ailuropoda_melanoleuca
ENSCAPG00000015039	YBX3	93	68.056	ENSAPLG00000003147	YBX3	100	68.056	Anas_platyrhynchos
ENSCAPG00000015039	YBX3	93	86.760	ENSANAG00000024492	-	91	86.760	Aotus_nancymaae
ENSCAPG00000015039	YBX3	60	80.357	ENSANAG00000033366	-	61	80.357	Aotus_nancymaae
ENSCAPG00000015039	YBX3	93	89.510	ENSBTAG00000009663	YBX3	76	86.364	Bos_taurus
ENSCAPG00000015039	YBX3	67	82.353	ENSCJAG00000033824	-	77	82.353	Callithrix_jacchus
ENSCAPG00000015039	YBX3	93	86.760	ENSCJAG00000021660	-	78	86.760	Callithrix_jacchus
ENSCAPG00000015039	YBX3	94	88.927	ENSCAFG00000013401	YBX3	88	88.489	Canis_familiaris
ENSCAPG00000015039	YBX3	93	86.014	ENSCAFG00020006412	YBX3	76	86.014	Canis_lupus_dingo
ENSCAPG00000015039	YBX3	93	88.811	ENSCHIG00000010863	YBX3	80	88.811	Capra_hircus
ENSCAPG00000015039	YBX3	93	54.196	ENSTSYG00000035821	-	70	94.318	Carlito_syrichta
ENSCAPG00000015039	YBX3	95	88.095	ENSTSYG00000004204	-	90	88.095	Carlito_syrichta
ENSCAPG00000015039	YBX3	93	99.301	ENSCPOG00000011329	YBX3	84	99.301	Cavia_porcellus
ENSCAPG00000015039	YBX3	93	86.411	ENSCCAG00000016469	YBX3	77	86.411	Cebus_capucinus
ENSCAPG00000015039	YBX3	93	86.063	ENSCATG00000034411	YBX3	77	86.063	Cercocebus_atys
ENSCAPG00000015039	YBX3	95	96.587	ENSCLAG00000016030	YBX3	96	96.587	Chinchilla_lanigera
ENSCAPG00000015039	YBX3	93	86.411	ENSCSAG00000008744	YBX3	77	86.411	Chlorocebus_sabaeus
ENSCAPG00000015039	YBX3	93	77.700	ENSCPBG00000014147	YBX3	80	77.700	Chrysemys_picta_bellii
ENSCAPG00000015039	YBX3	93	87.108	ENSCANG00000036801	YBX3	91	87.108	Colobus_angolensis_palliatus
ENSCAPG00000015039	YBX3	93	88.462	ENSCGRG00001016148	Ybx3	79	88.462	Cricetulus_griseus_chok1gshd
ENSCAPG00000015039	YBX3	94	87.119	ENSCGRG00000004563	Ybx3	99	87.119	Cricetulus_griseus_crigri
ENSCAPG00000015039	YBX3	93	89.437	ENSDORG00000009103	Ybx3	83	88.737	Dipodomys_ordii
ENSCAPG00000015039	YBX3	92	79.577	ENSETEG00000002557	YBX3	99	78.169	Echinops_telfairi
ENSCAPG00000015039	YBX3	93	83.916	ENSEASG00005014726	YBX3	76	83.916	Equus_asinus_asinus
ENSCAPG00000015039	YBX3	93	87.063	ENSECAG00000013777	YBX3	77	87.063	Equus_caballus
ENSCAPG00000015039	YBX3	92	86.972	ENSEEUG00000010415	YBX3	100	87.324	Erinaceus_europaeus
ENSCAPG00000015039	YBX3	93	87.456	ENSFCAG00000027748	YBX3	77	87.456	Felis_catus
ENSCAPG00000015039	YBX3	93	65.157	ENSFALG00000003661	YBX3	100	62.369	Ficedula_albicollis
ENSCAPG00000015039	YBX3	96	89.189	ENSFDAG00000021192	YBX3	95	89.189	Fukomys_damarensis
ENSCAPG00000015039	YBX3	93	59.091	ENSGALG00000031890	YBX3	74	59.441	Gallus_gallus
ENSCAPG00000015039	YBX3	93	76.307	ENSGAGG00000017780	YBX3	80	76.307	Gopherus_agassizii
ENSCAPG00000015039	YBX3	93	86.760	ENSGGOG00000001352	YBX3	77	86.760	Gorilla_gorilla
ENSCAPG00000015039	YBX3	93	81.379	ENSHGLG00000014798	-	85	81.724	Heterocephalus_glaber_female
ENSCAPG00000015039	YBX3	86	82.331	ENSHGLG00000015495	-	78	80.377	Heterocephalus_glaber_female
ENSCAPG00000015039	YBX3	68	97.959	ENSHGLG00100003589	YBX3	91	70.370	Heterocephalus_glaber_male
ENSCAPG00000015039	YBX3	93	83.566	ENSSTOG00000032577	-	81	83.566	Ictidomys_tridecemlineatus
ENSCAPG00000015039	YBX3	95	81.570	ENSSTOG00000002108	-	90	81.570	Ictidomys_tridecemlineatus
ENSCAPG00000015039	YBX3	93	65.972	ENSJJAG00000014239	Ybx3	92	82.500	Jaculus_jaculus
ENSCAPG00000015039	YBX3	93	88.811	ENSLAFG00000017247	YBX3	83	85.053	Loxodonta_africana
ENSCAPG00000015039	YBX3	93	86.411	ENSMFAG00000039369	YBX3	77	86.411	Macaca_fascicularis
ENSCAPG00000015039	YBX3	93	86.411	ENSMMUG00000022469	YBX3	88	86.411	Macaca_mulatta
ENSCAPG00000015039	YBX3	93	86.411	ENSMNEG00000045109	YBX3	77	86.411	Macaca_nemestrina
ENSCAPG00000015039	YBX3	97	86.957	ENSMLEG00000033618	YBX3	83	88.396	Mandrillus_leucophaeus
ENSCAPG00000015039	YBX3	93	66.667	ENSMGAG00000014224	YBX3	99	66.667	Meleagris_gallopavo
ENSCAPG00000015039	YBX3	93	88.462	ENSMAUG00000012185	Ybx3	89	88.462	Mesocricetus_auratus
ENSCAPG00000015039	YBX3	93	90.909	ENSMICG00000038002	-	77	90.909	Microcebus_murinus
ENSCAPG00000015039	YBX3	76	80.556	ENSMICG00000031459	-	75	80.645	Microcebus_murinus
ENSCAPG00000015039	YBX3	93	87.762	ENSMOCG00000016291	Ybx3	93	87.762	Microtus_ochrogaster
ENSCAPG00000015039	YBX3	99	78.964	ENSMODG00000018248	YBX3	93	80.000	Monodelphis_domestica
ENSCAPG00000015039	YBX3	93	88.112	MGP_CAROLIEiJ_G0028947	Ybx3	79	88.112	Mus_caroli
ENSCAPG00000015039	YBX3	93	88.112	ENSMUSG00000030189	Ybx3	79	88.112	Mus_musculus
ENSCAPG00000015039	YBX3	93	88.811	MGP_PahariEiJ_G0022709	Ybx3	79	88.811	Mus_pahari
ENSCAPG00000015039	YBX3	93	88.462	MGP_SPRETEiJ_G0029994	Ybx3	79	88.462	Mus_spretus
ENSCAPG00000015039	YBX3	93	70.847	ENSMPUG00000011810	YBX3	78	70.169	Mustela_putorius_furo
ENSCAPG00000015039	YBX3	86	88.104	ENSMLUG00000007476	YBX3	100	85.874	Myotis_lucifugus
ENSCAPG00000015039	YBX3	92	83.803	ENSNGAG00000000710	Ybx3	88	60.915	Nannospalax_galili
ENSCAPG00000015039	YBX3	93	84.321	ENSNLEG00000034844	YBX3	81	82.578	Nomascus_leucogenys
ENSCAPG00000015039	YBX3	56	75.145	ENSMEUG00000002507	-	81	75.145	Notamacropus_eugenii
ENSCAPG00000015039	YBX3	88	89.963	ENSODEG00000017957	YBX3	84	89.860	Octodon_degus
ENSCAPG00000015039	YBX3	88	87.085	ENSOCUG00000001889	YBX3	81	84.698	Oryctolagus_cuniculus
ENSCAPG00000015039	YBX3	93	87.713	ENSOGAG00000013245	YBX3	78	87.713	Otolemur_garnettii
ENSCAPG00000015039	YBX3	93	80.208	ENSOARG00000020919	YBX3	97	80.208	Ovis_aries
ENSCAPG00000015039	YBX3	93	86.760	ENSPPAG00000039068	YBX3	80	86.760	Pan_paniscus
ENSCAPG00000015039	YBX3	93	87.456	ENSPPRG00000005859	YBX3	77	87.456	Panthera_pardus
ENSCAPG00000015039	YBX3	93	90.141	ENSPTIG00000005322	YBX3	84	88.552	Panthera_tigris_altaica
ENSCAPG00000015039	YBX3	93	86.760	ENSPTRG00000004681	YBX3	77	86.760	Pan_troglodytes
ENSCAPG00000015039	YBX3	93	86.063	ENSPANG00000010280	YBX3	77	86.063	Papio_anubis
ENSCAPG00000015039	YBX3	69	99.038	ENSPSIG00000009247	YBX3	92	100.000	Pelodiscus_sinensis
ENSCAPG00000015039	YBX3	93	88.112	ENSPEMG00000012132	-	90	88.112	Peromyscus_maniculatus_bairdii
ENSCAPG00000015039	YBX3	65	97.727	ENSPEMG00000010391	-	60	97.727	Peromyscus_maniculatus_bairdii
ENSCAPG00000015039	YBX3	84	79.923	ENSPCIG00000029949	YBX3	93	82.427	Phascolarctos_cinereus
ENSCAPG00000015039	YBX3	93	86.411	ENSPPYG00000004279	YBX3	77	86.411	Pongo_abelii
ENSCAPG00000015039	YBX3	67	90.821	ENSPCAG00000001397	YBX3	70	90.547	Procavia_capensis
ENSCAPG00000015039	YBX3	57	85.143	ENSPCOG00000011663	YBX3	67	85.143	Propithecus_coquereli
ENSCAPG00000015039	YBX3	93	74.913	ENSPVAG00000006740	YBX3	54	91.542	Pteropus_vampyrus
ENSCAPG00000015039	YBX3	93	88.811	ENSRNOG00000005480	Ybx3	79	88.811	Rattus_norvegicus
ENSCAPG00000015039	YBX3	93	86.411	ENSRBIG00000039208	YBX3	77	86.411	Rhinopithecus_bieti
ENSCAPG00000015039	YBX3	93	86.411	ENSRROG00000029638	YBX3	77	86.411	Rhinopithecus_roxellana
ENSCAPG00000015039	YBX3	95	89.078	ENSSBOG00000030573	YBX3	85	89.078	Saimiri_boliviensis_boliviensis
ENSCAPG00000015039	YBX3	93	78.007	ENSSHAG00000003262	YBX3	98	77.320	Sarcophilus_harrisii
ENSCAPG00000015039	YBX3	93	88.502	ENSSSCG00000000633	YBX3	75	88.502	Sus_scrofa
ENSCAPG00000015039	YBX3	93	88.153	ENSTBEG00000012570	YBX3	79	88.153	Tupaia_belangeri
ENSCAPG00000015039	YBX3	85	81.203	ENSTTRG00000008045	YBX3	100	80.827	Tursiops_truncatus
ENSCAPG00000015039	YBX3	90	87.365	ENSUAMG00000016662	YBX3	100	87.365	Ursus_americanus
ENSCAPG00000015039	YBX3	93	90.845	ENSUMAG00000016118	YBX3	98	88.926	Ursus_maritimus
ENSCAPG00000015039	YBX3	92	67.368	ENSVPAG00000000876	YBX3	100	67.368	Vicugna_pacos
ENSCAPG00000015039	YBX3	90	85.921	ENSVVUG00000004956	YBX3	100	85.921	Vulpes_vulpes
ENSCAPG00000015039	YBX3	63	90.909	ENSXETG00000016239	ybx3	73	60.338	Xenopus_tropicalis