EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015077 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 49953 bases
Position: chrAVPZ01000022.1:337728-387680
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014812	PRP1_N	PF06424.12	1.8e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018588	PRPF6-201	2733	-	ENSCAPP00000014812	910 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015077	PRPF6	100	96.838	ENSG00000101161	PRPF6	97	96.838	Homo_sapiens
ENSCAPG00000015077	PRPF6	100	91.494	ENSAPOG00000010395	prpf6	93	92.366	Acanthochromis_polyacanthus
ENSCAPG00000015077	PRPF6	100	97.383	ENSAMEG00000001916	PRPF6	97	97.383	Ailuropoda_melanoleuca
ENSCAPG00000015077	PRPF6	100	91.167	ENSACIG00000019862	prpf6	93	92.039	Amphilophus_citrinellus
ENSCAPG00000015077	PRPF6	100	91.385	ENSAOCG00000012988	prpf6	93	92.257	Amphiprion_ocellaris
ENSCAPG00000015077	PRPF6	100	84.515	ENSAPEG00000008301	prpf6	97	85.496	Amphiprion_percula
ENSCAPG00000015077	PRPF6	100	90.840	ENSATEG00000005581	prpf6	93	91.712	Anabas_testudineus
ENSCAPG00000015077	PRPF6	100	96.838	ENSACAG00000006464	PRPF6	93	96.838	Anolis_carolinensis
ENSCAPG00000015077	PRPF6	100	96.947	ENSANAG00000012661	PRPF6	97	97.455	Aotus_nancymaae
ENSCAPG00000015077	PRPF6	100	91.058	ENSACLG00000025875	prpf6	93	91.930	Astatotilapia_calliptera
ENSCAPG00000015077	PRPF6	100	91.276	ENSAMXG00000001929	prpf6	93	92.148	Astyanax_mexicanus
ENSCAPG00000015077	PRPF6	100	97.056	ENSBTAG00000011656	PRPF6	97	97.056	Bos_taurus
ENSCAPG00000015077	PRPF6	100	96.947	ENSCJAG00000010616	PRPF6	97	96.947	Callithrix_jacchus
ENSCAPG00000015077	PRPF6	100	97.274	ENSCAFG00000013165	PRPF6	97	97.274	Canis_familiaris
ENSCAPG00000015077	PRPF6	100	97.274	ENSCAFG00020002050	PRPF6	97	97.274	Canis_lupus_dingo
ENSCAPG00000015077	PRPF6	100	97.056	ENSCHIG00000018187	PRPF6	97	97.056	Capra_hircus
ENSCAPG00000015077	PRPF6	100	97.492	ENSTSYG00000007814	PRPF6	97	97.492	Carlito_syrichta
ENSCAPG00000015077	PRPF6	100	98.691	ENSCPOG00000007518	PRPF6	97	98.691	Cavia_porcellus
ENSCAPG00000015077	PRPF6	100	93.239	ENSCCAG00000024564	PRPF6	97	93.675	Cebus_capucinus
ENSCAPG00000015077	PRPF6	100	96.728	ENSCATG00000037473	PRPF6	97	96.728	Cercocebus_atys
ENSCAPG00000015077	PRPF6	100	94.547	ENSCLAG00000003854	PRPF6	97	94.547	Chinchilla_lanigera
ENSCAPG00000015077	PRPF6	100	91.116	ENSCSAG00000016742	PRPF6	97	91.549	Chlorocebus_sabaeus
ENSCAPG00000015077	PRPF6	88	80.000	ENSCHOG00000003315	-	100	80.000	Choloepus_hoffmanni
ENSCAPG00000015077	PRPF6	100	97.056	ENSCPBG00000013964	PRPF6	94	97.056	Chrysemys_picta_bellii
ENSCAPG00000015077	PRPF6	100	72.294	ENSCING00000008817	-	97	72.619	Ciona_intestinalis
ENSCAPG00000015077	PRPF6	100	96.728	ENSCANG00000038230	PRPF6	97	96.728	Colobus_angolensis_palliatus
ENSCAPG00000015077	PRPF6	100	98.255	ENSCGRG00001022666	Prpf6	97	98.255	Cricetulus_griseus_chok1gshd
ENSCAPG00000015077	PRPF6	100	85.605	ENSCSEG00000018561	prpf6	97	86.478	Cynoglossus_semilaevis
ENSCAPG00000015077	PRPF6	100	91.385	ENSCVAG00000010550	prpf6	93	92.257	Cyprinodon_variegatus
ENSCAPG00000015077	PRPF6	100	91.058	ENSDARG00000091367	prpf6	96	91.930	Danio_rerio
ENSCAPG00000015077	PRPF6	100	96.401	ENSDNOG00000040544	PRPF6	97	96.401	Dasypus_novemcinctus
ENSCAPG00000015077	PRPF6	93	97.196	ENSDORG00000005406	Prpf6	100	97.196	Dipodomys_ordii
ENSCAPG00000015077	PRPF6	99	71.413	FBgn0036828	CG6841	96	71.727	Drosophila_melanogaster
ENSCAPG00000015077	PRPF6	84	100.000	ENSETEG00000004447	PRPF6	82	100.000	Echinops_telfairi
ENSCAPG00000015077	PRPF6	100	85.761	ENSEBUG00000008835	prpf6	97	86.087	Eptatretus_burgeri
ENSCAPG00000015077	PRPF6	100	97.274	ENSEASG00005023115	PRPF6	97	97.274	Equus_asinus_asinus
ENSCAPG00000015077	PRPF6	100	92.475	ENSECAG00000013983	PRPF6	97	92.912	Equus_caballus
ENSCAPG00000015077	PRPF6	90	94.688	ENSEEUG00000000180	PRPF6	79	94.688	Erinaceus_europaeus
ENSCAPG00000015077	PRPF6	100	90.731	ENSELUG00000001945	prpf6	91	90.731	Esox_lucius
ENSCAPG00000015077	PRPF6	100	97.274	ENSFCAG00000001183	PRPF6	97	97.274	Felis_catus
ENSCAPG00000015077	PRPF6	100	96.947	ENSFALG00000010326	-	95	96.947	Ficedula_albicollis
ENSCAPG00000015077	PRPF6	100	89.204	ENSFALG00000006046	-	94	89.640	Ficedula_albicollis
ENSCAPG00000015077	PRPF6	100	98.691	ENSFDAG00000006451	PRPF6	100	98.639	Fukomys_damarensis
ENSCAPG00000015077	PRPF6	100	92.039	ENSFHEG00000000560	prpf6	94	92.475	Fundulus_heteroclitus
ENSCAPG00000015077	PRPF6	100	88.395	ENSGMOG00000015622	prpf6	97	88.395	Gadus_morhua
ENSCAPG00000015077	PRPF6	100	96.728	ENSGALG00000006001	PRPF6	97	96.728	Gallus_gallus
ENSCAPG00000015077	PRPF6	100	86.805	ENSGAFG00000021109	prpf6	93	87.677	Gambusia_affinis
ENSCAPG00000015077	PRPF6	100	89.858	ENSGACG00000002576	prpf6	97	90.294	Gasterosteus_aculeatus
ENSCAPG00000015077	PRPF6	100	96.947	ENSGAGG00000008653	PRPF6	94	96.947	Gopherus_agassizii
ENSCAPG00000015077	PRPF6	100	96.838	ENSGGOG00000016876	PRPF6	96	98.761	Gorilla_gorilla
ENSCAPG00000015077	PRPF6	100	91.058	ENSHBUG00000004496	prpf6	93	91.930	Haplochromis_burtoni
ENSCAPG00000015077	PRPF6	100	98.473	ENSHGLG00000009222	PRPF6	97	98.473	Heterocephalus_glaber_female
ENSCAPG00000015077	PRPF6	100	98.473	ENSHGLG00100016600	PRPF6	100	98.473	Heterocephalus_glaber_male
ENSCAPG00000015077	PRPF6	100	89.858	ENSHCOG00000011513	prpf6	93	90.731	Hippocampus_comes
ENSCAPG00000015077	PRPF6	100	92.039	ENSIPUG00000004912	prpf6	94	92.475	Ictalurus_punctatus
ENSCAPG00000015077	PRPF6	100	97.036	ENSSTOG00000002922	PRPF6	97	97.036	Ictidomys_tridecemlineatus
ENSCAPG00000015077	PRPF6	100	98.473	ENSJJAG00000000836	Prpf6	97	98.473	Jaculus_jaculus
ENSCAPG00000015077	PRPF6	100	90.949	ENSKMAG00000017800	prpf6	93	91.821	Kryptolebias_marmoratus
ENSCAPG00000015077	PRPF6	100	90.513	ENSLBEG00000012582	prpf6	93	90.949	Labrus_bergylta
ENSCAPG00000015077	PRPF6	100	93.021	ENSLOCG00000004827	prpf6	92	93.893	Lepisosteus_oculatus
ENSCAPG00000015077	PRPF6	100	96.510	ENSLAFG00000005272	PRPF6	97	96.510	Loxodonta_africana
ENSCAPG00000015077	PRPF6	100	96.728	ENSMFAG00000037542	PRPF6	96	98.761	Macaca_fascicularis
ENSCAPG00000015077	PRPF6	94	98.440	ENSMMUG00000015558	PRPF6	98	98.440	Macaca_mulatta
ENSCAPG00000015077	PRPF6	100	81.630	ENSMNEG00000045555	PRPF6	97	82.065	Macaca_nemestrina
ENSCAPG00000015077	PRPF6	100	91.167	ENSMAMG00000010718	prpf6	94	91.930	Mastacembelus_armatus
ENSCAPG00000015077	PRPF6	100	90.523	ENSMZEG00005015261	-	97	91.394	Maylandia_zebra
ENSCAPG00000015077	PRPF6	96	90.590	ENSMZEG00005026539	prpf6	100	91.497	Maylandia_zebra
ENSCAPG00000015077	PRPF6	100	96.947	ENSMGAG00000006634	PRPF6	100	96.947	Meleagris_gallopavo
ENSCAPG00000015077	PRPF6	100	98.364	ENSMAUG00000013969	Prpf6	97	98.364	Mesocricetus_auratus
ENSCAPG00000015077	PRPF6	90	97.199	ENSMICG00000017793	PRPF6	99	97.199	Microcebus_murinus
ENSCAPG00000015077	PRPF6	100	98.255	ENSMOCG00000001701	Prpf6	97	98.255	Microtus_ochrogaster
ENSCAPG00000015077	PRPF6	100	90.185	ENSMMOG00000020419	prpf6	97	91.058	Mola_mola
ENSCAPG00000015077	PRPF6	99	97.586	ENSMODG00000017051	PRPF6	96	97.586	Monodelphis_domestica
ENSCAPG00000015077	PRPF6	100	91.276	ENSMALG00000000089	prpf6	98	91.712	Monopterus_albus
ENSCAPG00000015077	PRPF6	100	92.857	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSCAPG00000015077	PRPF6	100	98.364	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSCAPG00000015077	PRPF6	100	98.364	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSCAPG00000015077	PRPF6	100	98.364	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSCAPG00000015077	PRPF6	94	96.663	ENSMPUG00000008673	PRPF6	99	96.663	Mustela_putorius_furo
ENSCAPG00000015077	PRPF6	100	98.582	ENSNGAG00000003365	Prpf6	97	98.582	Nannospalax_galili
ENSCAPG00000015077	PRPF6	100	91.167	ENSNBRG00000015025	prpf6	93	92.039	Neolamprologus_brichardi
ENSCAPG00000015077	PRPF6	100	96.728	ENSNLEG00000010208	PRPF6	97	96.728	Nomascus_leucogenys
ENSCAPG00000015077	PRPF6	100	88.153	ENSMEUG00000009824	-	87	88.340	Notamacropus_eugenii
ENSCAPG00000015077	PRPF6	100	92.366	ENSODEG00000004841	PRPF6	97	92.803	Octodon_degus
ENSCAPG00000015077	PRPF6	100	91.058	ENSONIG00000017406	prpf6	93	91.930	Oreochromis_niloticus
ENSCAPG00000015077	PRPF6	100	97.274	ENSOANG00000004920	PRPF6	97	97.274	Ornithorhynchus_anatinus
ENSCAPG00000015077	PRPF6	100	96.510	ENSOCUG00000014151	PRPF6	98	96.510	Oryctolagus_cuniculus
ENSCAPG00000015077	PRPF6	100	90.949	ENSORLG00000009592	prpf6	93	91.385	Oryzias_latipes
ENSCAPG00000015077	PRPF6	100	91.058	ENSORLG00020001458	prpf6	93	91.494	Oryzias_latipes_hni
ENSCAPG00000015077	PRPF6	100	91.058	ENSORLG00015018762	prpf6	93	91.494	Oryzias_latipes_hsok
ENSCAPG00000015077	PRPF6	100	90.949	ENSOMEG00000012174	prpf6	93	91.821	Oryzias_melastigma
ENSCAPG00000015077	PRPF6	100	89.325	ENSOGAG00000007573	PRPF6	97	89.760	Otolemur_garnettii
ENSCAPG00000015077	PRPF6	100	97.056	ENSOARG00000008776	PRPF6	97	97.056	Ovis_aries
ENSCAPG00000015077	PRPF6	100	96.838	ENSPPAG00000008686	PRPF6	96	98.761	Pan_paniscus
ENSCAPG00000015077	PRPF6	100	97.165	ENSPPRG00000008497	PRPF6	97	97.165	Panthera_pardus
ENSCAPG00000015077	PRPF6	100	97.165	ENSPTIG00000011184	PRPF6	97	97.165	Panthera_tigris_altaica
ENSCAPG00000015077	PRPF6	100	96.838	ENSPTRG00000013765	PRPF6	96	98.761	Pan_troglodytes
ENSCAPG00000015077	PRPF6	100	96.183	ENSPANG00000024135	PRPF6	97	96.183	Papio_anubis
ENSCAPG00000015077	PRPF6	100	92.585	ENSPKIG00000005627	prpf6	96	93.457	Paramormyrops_kingsleyae
ENSCAPG00000015077	PRPF6	96	97.166	ENSPSIG00000007717	PRPF6	100	97.166	Pelodiscus_sinensis
ENSCAPG00000015077	PRPF6	100	89.858	ENSPMGG00000008925	prpf6	94	90.622	Periophthalmus_magnuspinnatus
ENSCAPG00000015077	PRPF6	100	98.255	ENSPEMG00000016036	Prpf6	97	98.255	Peromyscus_maniculatus_bairdii
ENSCAPG00000015077	PRPF6	100	86.942	ENSPMAG00000006144	prpf6	97	87.269	Petromyzon_marinus
ENSCAPG00000015077	PRPF6	100	97.492	ENSPCIG00000017909	PRPF6	97	97.492	Phascolarctos_cinereus
ENSCAPG00000015077	PRPF6	100	91.603	ENSPFOG00000006431	prpf6	93	92.475	Poecilia_formosa
ENSCAPG00000015077	PRPF6	100	91.494	ENSPLAG00000005974	prpf6	93	92.366	Poecilia_latipinna
ENSCAPG00000015077	PRPF6	100	91.712	ENSPMEG00000009977	prpf6	93	92.585	Poecilia_mexicana
ENSCAPG00000015077	PRPF6	100	91.603	ENSPREG00000017993	prpf6	89	92.475	Poecilia_reticulata
ENSCAPG00000015077	PRPF6	100	96.292	ENSPPYG00000011256	PRPF6	97	96.292	Pongo_abelii
ENSCAPG00000015077	PRPF6	97	98.529	ENSPCAG00000006536	PRPF6	88	98.529	Procavia_capensis
ENSCAPG00000015077	PRPF6	100	97.056	ENSPCOG00000016881	PRPF6	97	97.056	Propithecus_coquereli
ENSCAPG00000015077	PRPF6	100	90.949	ENSPVAG00000014316	PRPF6	97	90.949	Pteropus_vampyrus
ENSCAPG00000015077	PRPF6	100	74.183	ENSPNYG00000001939	prpf6	93	73.391	Pundamilia_nyererei
ENSCAPG00000015077	PRPF6	100	91.712	ENSPNAG00000015606	prpf6	93	92.585	Pygocentrus_nattereri
ENSCAPG00000015077	PRPF6	100	98.255	ENSRNOG00000051498	Prpf6	97	98.255	Rattus_norvegicus
ENSCAPG00000015077	PRPF6	100	96.728	ENSRBIG00000043613	PRPF6	98	97.059	Rhinopithecus_bieti
ENSCAPG00000015077	PRPF6	100	93.051	ENSRROG00000040969	PRPF6	98	97.059	Rhinopithecus_roxellana
ENSCAPG00000015077	PRPF6	94	95.096	ENSSBOG00000020632	PRPF6	93	95.096	Saimiri_boliviensis_boliviensis
ENSCAPG00000015077	PRPF6	100	97.492	ENSSHAG00000016810	PRPF6	97	97.492	Sarcophilus_harrisii
ENSCAPG00000015077	PRPF6	100	92.803	ENSSFOG00015020859	prpf6	98	93.675	Scleropages_formosus
ENSCAPG00000015077	PRPF6	100	90.403	ENSSMAG00000008112	prpf6	93	90.840	Scophthalmus_maximus
ENSCAPG00000015077	PRPF6	100	91.058	ENSSDUG00000016142	prpf6	93	91.930	Seriola_dumerili
ENSCAPG00000015077	PRPF6	100	91.058	ENSSLDG00000025283	prpf6	97	88.332	Seriola_lalandi_dorsalis
ENSCAPG00000015077	PRPF6	96	95.578	ENSSPUG00000018260	PRPF6	100	95.578	Sphenodon_punctatus
ENSCAPG00000015077	PRPF6	100	91.058	ENSSPAG00000015850	prpf6	93	91.930	Stegastes_partitus
ENSCAPG00000015077	PRPF6	100	97.165	ENSSSCG00000029119	PRPF6	100	97.052	Sus_scrofa
ENSCAPG00000015077	PRPF6	100	97.056	ENSTGUG00000007221	PRPF6	97	97.056	Taeniopygia_guttata
ENSCAPG00000015077	PRPF6	100	89.967	ENSTRUG00000002920	prpf6	93	90.840	Takifugu_rubripes
ENSCAPG00000015077	PRPF6	100	83.514	ENSTNIG00000017873	prpf6	97	84.382	Tetraodon_nigroviridis
ENSCAPG00000015077	PRPF6	91	92.818	ENSTBEG00000005348	PRPF6	85	95.028	Tupaia_belangeri
ENSCAPG00000015077	PRPF6	100	96.619	ENSTTRG00000013068	PRPF6	97	96.619	Tursiops_truncatus
ENSCAPG00000015077	PRPF6	100	95.965	ENSUMAG00000021631	PRPF6	98	95.965	Ursus_maritimus
ENSCAPG00000015077	PRPF6	100	97.274	ENSVVUG00000014948	PRPF6	97	97.274	Vulpes_vulpes
ENSCAPG00000015077	PRPF6	100	94.111	ENSXETG00000012054	prpf6	94	94.984	Xenopus_tropicalis
ENSCAPG00000015077	PRPF6	100	91.712	ENSXCOG00000008082	prpf6	93	92.585	Xiphophorus_couchianus
ENSCAPG00000015077	PRPF6	100	91.712	ENSXMAG00000015581	prpf6	93	92.585	Xiphophorus_maculatus