EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000015105 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 520 bases
Position: chrAVPZ01000500.1:4820156-4820675
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000014819	MRP-S32	PF10210.9	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000018595	-	369	-	ENSCAPP00000014819	122 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000015105	-	81	78.814	ENSCAPG00000016985	-	89	78.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015105	-	100	66.197	ENSG00000198015	MRPL42	100	66.197	Homo_sapiens
ENSCAPG00000015105	-	70	68.571	ENSAMEG00000009832	MRPL42	83	68.571	Ailuropoda_melanoleuca
ENSCAPG00000015105	-	62	50.515	ENSACIG00000017826	mrpl42	69	50.515	Amphilophus_citrinellus
ENSCAPG00000015105	-	97	53.237	ENSAPLG00000015057	MRPL42	97	53.237	Anas_platyrhynchos
ENSCAPG00000015105	-	89	63.281	ENSANAG00000000692	-	91	63.281	Aotus_nancymaae
ENSCAPG00000015105	-	86	65.600	ENSANAG00000033101	-	83	65.600	Aotus_nancymaae
ENSCAPG00000015105	-	100	63.380	ENSANAG00000036935	-	100	63.380	Aotus_nancymaae
ENSCAPG00000015105	-	100	48.227	ENSANAG00000036083	-	100	48.227	Aotus_nancymaae
ENSCAPG00000015105	-	100	69.014	ENSBTAG00000002708	MRPL42	100	69.014	Bos_taurus
ENSCAPG00000015105	-	70	60.377	ENSBTAG00000052971	-	97	60.377	Bos_taurus
ENSCAPG00000015105	-	100	66.197	ENSCJAG00000046971	MRPL42	100	66.197	Callithrix_jacchus
ENSCAPG00000015105	-	63	68.041	ENSCAFG00020022967	-	85	68.041	Canis_lupus_dingo
ENSCAPG00000015105	-	89	67.969	ENSCHIG00000014921	MRPL42	100	67.969	Capra_hircus
ENSCAPG00000015105	-	91	63.359	ENSTSYG00000036466	-	90	63.359	Carlito_syrichta
ENSCAPG00000015105	-	100	69.014	ENSTSYG00000006370	-	100	69.014	Carlito_syrichta
ENSCAPG00000015105	-	69	63.462	ENSTSYG00000032810	-	95	63.462	Carlito_syrichta
ENSCAPG00000015105	-	95	82.222	ENSCPOG00000030015	-	97	82.609	Cavia_porcellus
ENSCAPG00000015105	-	100	98.361	ENSCPOG00000008943	-	100	98.361	Cavia_porcellus
ENSCAPG00000015105	-	88	62.992	ENSCCAG00000032203	-	77	62.992	Cebus_capucinus
ENSCAPG00000015105	-	89	77.064	ENSCCAG00000029290	-	83	77.064	Cebus_capucinus
ENSCAPG00000015105	-	100	66.197	ENSCCAG00000031179	-	100	66.197	Cebus_capucinus
ENSCAPG00000015105	-	100	67.606	ENSCATG00000037616	MRPL42	100	67.606	Cercocebus_atys
ENSCAPG00000015105	-	100	76.596	ENSCLAG00000005421	MRPL42	100	76.596	Chinchilla_lanigera
ENSCAPG00000015105	-	100	66.901	ENSCSAG00000003706	MRPL42	100	66.901	Chlorocebus_sabaeus
ENSCAPG00000015105	-	83	57.851	ENSCPBG00000001581	MRPL42	82	57.851	Chrysemys_picta_bellii
ENSCAPG00000015105	-	100	67.606	ENSCANG00000033457	MRPL42	100	67.606	Colobus_angolensis_palliatus
ENSCAPG00000015105	-	98	52.174	ENSCGRG00001003813	-	98	52.174	Cricetulus_griseus_chok1gshd
ENSCAPG00000015105	-	100	62.500	ENSCGRG00001012694	-	100	62.500	Cricetulus_griseus_chok1gshd
ENSCAPG00000015105	-	98	62.590	ENSCGRG00000003801	Mrpl42	99	62.590	Cricetulus_griseus_crigri
ENSCAPG00000015105	-	89	61.240	ENSDNOG00000049701	-	91	61.240	Dasypus_novemcinctus
ENSCAPG00000015105	-	100	60.563	ENSDNOG00000032710	-	100	60.563	Dasypus_novemcinctus
ENSCAPG00000015105	-	98	67.626	ENSDORG00000015571	Mrpl42	99	67.626	Dipodomys_ordii
ENSCAPG00000015105	-	84	50.000	ENSETEG00000014745	-	92	50.000	Echinops_telfairi
ENSCAPG00000015105	-	100	71.831	ENSEASG00005019361	MRPL42	100	71.831	Equus_asinus_asinus
ENSCAPG00000015105	-	100	71.127	ENSECAG00000026888	MRPL42	100	71.127	Equus_caballus
ENSCAPG00000015105	-	85	70.492	ENSFCAG00000040567	-	100	70.492	Felis_catus
ENSCAPG00000015105	-	100	69.718	ENSFCAG00000037907	-	100	69.718	Felis_catus
ENSCAPG00000015105	-	88	49.606	ENSFCAG00000036356	-	79	49.606	Felis_catus
ENSCAPG00000015105	-	84	56.911	ENSFALG00000010717	MRPL42	84	56.911	Ficedula_albicollis
ENSCAPG00000015105	-	98	73.381	ENSFDAG00000018129	MRPL42	99	73.381	Fukomys_damarensis
ENSCAPG00000015105	-	84	54.472	ENSGALG00000011293	MRPL42	84	54.472	Gallus_gallus
ENSCAPG00000015105	-	98	52.414	ENSGAGG00000010125	MRPL42	99	52.414	Gopherus_agassizii
ENSCAPG00000015105	-	100	66.197	ENSGGOG00000022760	MRPL42	100	66.197	Gorilla_gorilla
ENSCAPG00000015105	-	84	70.732	ENSHGLG00000008248	-	100	70.732	Heterocephalus_glaber_female
ENSCAPG00000015105	-	84	74.590	ENSHGLG00000007399	-	91	74.194	Heterocephalus_glaber_female
ENSCAPG00000015105	-	85	74.194	ENSHGLG00100018317	-	87	74.194	Heterocephalus_glaber_male
ENSCAPG00000015105	-	84	71.311	ENSHGLG00100013257	-	99	71.311	Heterocephalus_glaber_male
ENSCAPG00000015105	-	100	64.789	ENSSTOG00000026544	MRPL42	100	64.789	Ictidomys_tridecemlineatus
ENSCAPG00000015105	-	98	46.809	ENSLACG00000006919	MRPL42	96	46.809	Latimeria_chalumnae
ENSCAPG00000015105	-	83	66.942	ENSLAFG00000013779	MRPL42	86	66.942	Loxodonta_africana
ENSCAPG00000015105	-	100	68.310	ENSMFAG00000032330	MRPL42	100	68.310	Macaca_fascicularis
ENSCAPG00000015105	-	100	65.493	ENSMMUG00000016805	MRPL42	100	65.493	Macaca_mulatta
ENSCAPG00000015105	-	100	67.606	ENSMNEG00000028853	MRPL42	100	67.606	Macaca_nemestrina
ENSCAPG00000015105	-	100	67.606	ENSMLEG00000038104	MRPL42	100	67.606	Mandrillus_leucophaeus
ENSCAPG00000015105	-	84	56.098	ENSMGAG00000011346	MRPL42	84	56.098	Meleagris_gallopavo
ENSCAPG00000015105	-	98	47.101	ENSMAUG00000018130	-	98	47.101	Mesocricetus_auratus
ENSCAPG00000015105	-	98	60.145	ENSMAUG00000010057	-	99	60.145	Mesocricetus_auratus
ENSCAPG00000015105	-	86	66.400	ENSMICG00000036541	-	99	62.264	Microcebus_murinus
ENSCAPG00000015105	-	61	61.053	ENSMICG00000045594	-	96	61.053	Microcebus_murinus
ENSCAPG00000015105	-	92	68.939	ENSMICG00000035189	-	92	68.939	Microcebus_murinus
ENSCAPG00000015105	-	62	61.458	ENSMICG00000028094	-	89	61.458	Microcebus_murinus
ENSCAPG00000015105	-	100	69.014	ENSMICG00000032596	-	100	69.014	Microcebus_murinus
ENSCAPG00000015105	-	98	60.145	ENSMOCG00000004616	-	99	60.145	Microtus_ochrogaster
ENSCAPG00000015105	-	98	63.309	ENSMOCG00000013541	-	99	63.309	Microtus_ochrogaster
ENSCAPG00000015105	-	98	60.714	MGP_CAROLIEiJ_G0015750	Mrpl42	99	60.714	Mus_caroli
ENSCAPG00000015105	-	98	60.000	ENSMUSG00000062981	Mrpl42	99	60.000	Mus_musculus
ENSCAPG00000015105	-	98	67.143	ENSMLUG00000025058	-	99	67.143	Myotis_lucifugus
ENSCAPG00000015105	-	100	64.539	ENSMLUG00000023702	-	100	64.539	Myotis_lucifugus
ENSCAPG00000015105	-	100	66.197	ENSMLUG00000029623	-	100	66.197	Myotis_lucifugus
ENSCAPG00000015105	-	89	65.625	ENSNGAG00000000717	Mrpl42	100	65.625	Nannospalax_galili
ENSCAPG00000015105	-	100	66.197	ENSNLEG00000005699	MRPL42	100	66.197	Nomascus_leucogenys
ENSCAPG00000015105	-	100	59.859	ENSOPRG00000010967	MRPL42	100	59.859	Ochotona_princeps
ENSCAPG00000015105	-	80	75.630	ENSODEG00000008681	-	100	75.630	Octodon_degus
ENSCAPG00000015105	-	100	69.930	ENSODEG00000012689	-	100	72.028	Octodon_degus
ENSCAPG00000015105	-	98	69.403	ENSODEG00000016452	-	98	70.896	Octodon_degus
ENSCAPG00000015105	-	100	64.085	ENSOCUG00000010928	MRPL42	100	64.085	Oryctolagus_cuniculus
ENSCAPG00000015105	-	100	66.901	ENSOGAG00000026395	-	100	66.901	Otolemur_garnettii
ENSCAPG00000015105	-	100	63.380	ENSOGAG00000024156	-	100	63.380	Otolemur_garnettii
ENSCAPG00000015105	-	100	64.789	ENSOGAG00000027617	-	100	64.789	Otolemur_garnettii
ENSCAPG00000015105	-	100	71.127	ENSOGAG00000025600	-	100	71.127	Otolemur_garnettii
ENSCAPG00000015105	-	94	65.926	ENSOGAG00000030438	-	96	65.926	Otolemur_garnettii
ENSCAPG00000015105	-	98	69.065	ENSOGAG00000034004	-	98	69.065	Otolemur_garnettii
ENSCAPG00000015105	-	100	70.423	ENSOGAG00000025686	-	100	70.423	Otolemur_garnettii
ENSCAPG00000015105	-	89	68.750	ENSOARG00000015849	MRPL42	100	68.750	Ovis_aries
ENSCAPG00000015105	-	100	66.197	ENSPPAG00000038254	MRPL42	100	66.197	Pan_paniscus
ENSCAPG00000015105	-	85	72.131	ENSPPRG00000017935	-	100	72.131	Panthera_pardus
ENSCAPG00000015105	-	100	69.014	ENSPPRG00000013218	-	100	69.014	Panthera_pardus
ENSCAPG00000015105	-	100	70.423	ENSPPRG00000015755	-	100	70.423	Panthera_pardus
ENSCAPG00000015105	-	88	56.637	ENSPPRG00000006533	-	79	56.637	Panthera_pardus
ENSCAPG00000015105	-	100	69.014	ENSPTIG00000019099	-	100	69.014	Panthera_tigris_altaica
ENSCAPG00000015105	-	100	69.718	ENSPTIG00000009394	-	100	69.718	Panthera_tigris_altaica
ENSCAPG00000015105	-	83	65.574	ENSPTIG00000009717	-	92	70.270	Panthera_tigris_altaica
ENSCAPG00000015105	-	100	66.197	ENSPTRG00000022791	MRPL42	100	66.197	Pan_troglodytes
ENSCAPG00000015105	-	100	59.184	ENSPANG00000030179	MRPL42	100	59.184	Papio_anubis
ENSCAPG00000015105	-	98	49.655	ENSPSIG00000010745	MRPL42	99	49.655	Pelodiscus_sinensis
ENSCAPG00000015105	-	97	62.319	ENSPEMG00000020562	-	98	62.319	Peromyscus_maniculatus_bairdii
ENSCAPG00000015105	-	100	52.027	ENSPCIG00000001472	-	77	52.027	Phascolarctos_cinereus
ENSCAPG00000015105	-	100	65.493	ENSPPYG00000004833	MRPL42	100	65.493	Pongo_abelii
ENSCAPG00000015105	-	75	67.826	ENSPCAG00000003791	MRPL42	97	67.826	Procavia_capensis
ENSCAPG00000015105	-	100	61.268	ENSPCOG00000025008	-	100	61.268	Propithecus_coquereli
ENSCAPG00000015105	-	88	66.929	ENSPCOG00000014986	-	91	66.929	Propithecus_coquereli
ENSCAPG00000015105	-	100	65.574	ENSPCOG00000018896	-	100	65.574	Propithecus_coquereli
ENSCAPG00000015105	-	51	53.659	ENSPVAG00000013736	-	69	53.659	Pteropus_vampyrus
ENSCAPG00000015105	-	98	63.309	ENSRNOG00000042740	Mrpl42	99	63.309	Rattus_norvegicus
ENSCAPG00000015105	-	98	60.714	ENSRNOG00000021867	AABR07009508.1	98	60.714	Rattus_norvegicus
ENSCAPG00000015105	-	100	66.197	ENSRBIG00000011046	-	100	66.197	Rhinopithecus_bieti
ENSCAPG00000015105	-	89	64.220	ENSRBIG00000044361	-	79	64.220	Rhinopithecus_bieti
ENSCAPG00000015105	-	100	66.197	ENSRROG00000033949	MRPL42	100	66.197	Rhinopithecus_roxellana
ENSCAPG00000015105	-	80	62.626	ENSSBOG00000025086	-	100	62.626	Saimiri_boliviensis_boliviensis
ENSCAPG00000015105	-	100	62.676	ENSSBOG00000009656	-	100	62.676	Saimiri_boliviensis_boliviensis
ENSCAPG00000015105	-	61	60.638	ENSSBOG00000027483	-	82	60.638	Saimiri_boliviensis_boliviensis
ENSCAPG00000015105	-	76	51.282	ENSSFOG00015006975	mrpl42	79	51.282	Scleropages_formosus
ENSCAPG00000015105	-	93	52.239	ENSSPUG00000015009	-	90	52.239	Sphenodon_punctatus
ENSCAPG00000015105	-	62	50.515	ENSSPAG00000013637	mrpl42	74	50.515	Stegastes_partitus
ENSCAPG00000015105	-	99	51.429	ENSSSCG00000036897	-	99	51.429	Sus_scrofa
ENSCAPG00000015105	-	51	69.841	ENSSSCG00000035613	-	57	70.968	Sus_scrofa
ENSCAPG00000015105	-	65	48.235	ENSSSCG00000034693	-	84	48.235	Sus_scrofa
ENSCAPG00000015105	-	100	69.718	ENSSSCG00000030478	-	100	69.718	Sus_scrofa
ENSCAPG00000015105	-	80	55.932	ENSTGUG00000008272	MRPL42	100	55.932	Taeniopygia_guttata
ENSCAPG00000015105	-	56	45.455	ENSTNIG00000018478	mrpl42	67	45.455	Tetraodon_nigroviridis
ENSCAPG00000015105	-	84	69.106	ENSTTRG00000003312	MRPL42	92	69.106	Tursiops_truncatus
ENSCAPG00000015105	-	100	71.127	ENSUAMG00000025405	-	100	71.127	Ursus_americanus
ENSCAPG00000015105	-	85	60.000	ENSUMAG00000014643	-	78	60.000	Ursus_maritimus
ENSCAPG00000015105	-	100	71.127	ENSUMAG00000003107	-	100	71.127	Ursus_maritimus
ENSCAPG00000015105	-	80	66.949	ENSVPAG00000007658	MRPL42	100	66.949	Vicugna_pacos
ENSCAPG00000015105	-	100	69.014	ENSVVUG00000011842	-	100	69.014	Vulpes_vulpes
ENSCAPG00000015105	-	63	44.898	ENSXMAG00000004057	mrpl42	74	44.898	Xiphophorus_maculatus