EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAPG00000015128 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Minus strand
Length
20595 bases
Position
chrAVPZ01000223.1:39138584-39159178
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000014863CSDPF00313.224.3e-5314
ENSCAPP00000014863CSDPF00313.224.3e-5324
ENSCAPP00000014863CSDPF00313.224.3e-5334
ENSCAPP00000014863CSDPF00313.224.3e-5344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000018639CSDE1-2012013-ENSCAPP00000014863670 (aa)--
Gene Model
Click here to download ENSCAPG00000015128's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015128's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000015128CSDE110091.228ENSG00000009307CSDE110097.826Homo_sapiens
ENSCAPG00000015128CSDE110068.681ENSAPOG00000015538csde110068.681Acanthochromis_polyacanthus
ENSCAPG00000015128CSDE110067.588ENSAMEG00000017129CSDE19467.588Ailuropoda_melanoleuca
ENSCAPG00000015128CSDE16773.476ENSACIG00000015175csde19873.476Amphilophus_citrinellus
ENSCAPG00000015128CSDE110069.231ENSAOCG00000011510csde19569.231Amphiprion_ocellaris
ENSCAPG00000015128CSDE110077.301ENSAPEG00000007194csde110069.231Amphiprion_percula
ENSCAPG00000015128CSDE110060.925ENSATEG00000003864csde110060.925Anabas_testudineus
ENSCAPG00000015128CSDE110063.442ENSAPLG00000008797CSDE110063.442Anas_platyrhynchos
ENSCAPG00000015128CSDE110093.865ENSACAG00000003120CSDE110093.865Anolis_carolinensis
ENSCAPG00000015128CSDE110091.228ENSANAG00000024665CSDE19591.228Aotus_nancymaae
ENSCAPG00000015128CSDE15254.483ENSANAG00000028396-8954.483Aotus_nancymaae
ENSCAPG00000015128CSDE110076.687ENSACLG00000013296csde110076.687Astatotilapia_calliptera
ENSCAPG00000015128CSDE110053.567ENSAMXG00000007436csde110053.567Astyanax_mexicanus
ENSCAPG00000015128CSDE110081.726ENSBTAG00000000678CSDE19581.726Bos_taurus
ENSCAPG00000015128CSDE110091.228ENSCJAG00000012565CSDE19591.228Callithrix_jacchus
ENSCAPG00000015128CSDE19867.734ENSCAFG00000009618CSDE19467.734Canis_familiaris
ENSCAPG00000015128CSDE110068.342ENSCAFG00020000481CSDE110068.342Canis_lupus_dingo
ENSCAPG00000015128CSDE110081.726ENSCHIG00000017250CSDE19581.726Capra_hircus
ENSCAPG00000015128CSDE110092.982ENSTSYG00000003747CSDE110092.982Carlito_syrichta
ENSCAPG00000015128CSDE110079.847ENSCPOG00000040388CSDE110079.847Cavia_porcellus
ENSCAPG00000015128CSDE17864.567ENSCCAG00000033677-9964.662Cebus_capucinus
ENSCAPG00000015128CSDE18065.485ENSCCAG00000030878-9165.485Cebus_capucinus
ENSCAPG00000015128CSDE110091.228ENSCCAG00000036794CSDE110091.228Cebus_capucinus
ENSCAPG00000015128CSDE110091.228ENSCATG00000036962CSDE19591.228Cercocebus_atys
ENSCAPG00000015128CSDE110093.567ENSCLAG00000006618CSDE110093.567Chinchilla_lanigera
ENSCAPG00000015128CSDE110091.228ENSCSAG00000001658CSDE19591.228Chlorocebus_sabaeus
ENSCAPG00000015128CSDE19878.280ENSCHOG00000000918CSDE18978.280Choloepus_hoffmanni
ENSCAPG00000015128CSDE110094.479ENSCPBG00000016547CSDE110094.479Chrysemys_picta_bellii
ENSCAPG00000015128CSDE19735.662ENSCING00000014465-9535.662Ciona_intestinalis
ENSCAPG00000015128CSDE19636.000ENSCSAVG00000008100-9836.000Ciona_savignyi
ENSCAPG00000015128CSDE18278.788ENSCANG00000031069-9378.788Colobus_angolensis_palliatus
ENSCAPG00000015128CSDE110091.228ENSCANG00000035096CSDE19591.228Colobus_angolensis_palliatus
ENSCAPG00000015128CSDE110092.398ENSCGRG00001016833-10092.398Cricetulus_griseus_chok1gshd
ENSCAPG00000015128CSDE110065.415ENSCGRG00001014011-10065.415Cricetulus_griseus_chok1gshd
ENSCAPG00000015128CSDE19678.174ENSCGRG00000002225-10078.174Cricetulus_griseus_crigri
ENSCAPG00000015128CSDE110060.383ENSCGRG00000005831-10060.383Cricetulus_griseus_crigri
ENSCAPG00000015128CSDE110068.681ENSCSEG00000002620csde19568.681Cynoglossus_semilaevis
ENSCAPG00000015128CSDE110077.914ENSCVAG00000001344csde110077.914Cyprinodon_variegatus
ENSCAPG00000015128CSDE110079.755ENSDARG00000074758csde110079.755Danio_rerio
ENSCAPG00000015128CSDE110068.342ENSDNOG00000010287-9368.342Dasypus_novemcinctus
ENSCAPG00000015128CSDE110091.813ENSDORG00000011609Csde110091.813Dipodomys_ordii
ENSCAPG00000015128CSDE19443.396FBgn0263352Unr8137.500Drosophila_melanogaster
ENSCAPG00000015128CSDE17659.075ENSETEG00000007109-9559.075Echinops_telfairi
ENSCAPG00000015128CSDE19961.436ENSETEG00000013678-9961.436Echinops_telfairi
ENSCAPG00000015128CSDE19998.347ENSETEG00000002491-7398.347Echinops_telfairi
ENSCAPG00000015128CSDE18358.372ENSETEG00000006280-10058.372Echinops_telfairi
ENSCAPG00000015128CSDE19949.405ENSEBUG00000008647csde19949.405Eptatretus_burgeri
ENSCAPG00000015128CSDE110092.398ENSEASG00005006284CSDE110092.398Equus_asinus_asinus
ENSCAPG00000015128CSDE110092.398ENSECAG00000020885CSDE110092.398Equus_caballus
ENSCAPG00000015128CSDE19182.468ENSEEUG00000006286CSDE16382.468Erinaceus_europaeus
ENSCAPG00000015128CSDE110068.132ENSELUG00000015507csde19568.132Esox_lucius
ENSCAPG00000015128CSDE110091.813ENSFCAG00000029266CSDE19591.813Felis_catus
ENSCAPG00000015128CSDE110095.706ENSFALG00000003407CSDE110095.706Ficedula_albicollis
ENSCAPG00000015128CSDE110092.982ENSFDAG00000007882CSDE110092.982Fukomys_damarensis
ENSCAPG00000015128CSDE110077.914ENSFHEG00000010799csde110077.914Fundulus_heteroclitus
ENSCAPG00000015128CSDE19975.460ENSGMOG00000012731csde110075.460Gadus_morhua
ENSCAPG00000015128CSDE19893.865ENSGALG00000002139CSDE19893.865Gallus_gallus
ENSCAPG00000015128CSDE18650.655ENSGAFG00000005241csde19550.655Gambusia_affinis
ENSCAPG00000015128CSDE110076.506ENSGACG00000004544csde110076.506Gasterosteus_aculeatus
ENSCAPG00000015128CSDE110093.865ENSGAGG00000017685CSDE110093.865Gopherus_agassizii
ENSCAPG00000015128CSDE110091.228ENSGGOG00000002164CSDE19591.228Gorilla_gorilla
ENSCAPG00000015128CSDE110076.687ENSHBUG00000020315csde19576.687Haplochromis_burtoni
ENSCAPG00000015128CSDE19965.494ENSHGLG00000000650-9965.494Heterocephalus_glaber_female
ENSCAPG00000015128CSDE110073.062ENSHGLG00000003829-10073.062Heterocephalus_glaber_female
ENSCAPG00000015128CSDE110092.982ENSHGLG00000009620-10092.982Heterocephalus_glaber_female
ENSCAPG00000015128CSDE19972.377ENSHGLG00000007471-9872.377Heterocephalus_glaber_female
ENSCAPG00000015128CSDE19967.964ENSHGLG00000008555-9767.964Heterocephalus_glaber_female
ENSCAPG00000015128CSDE19671.715ENSHGLG00000010039-10071.715Heterocephalus_glaber_female
ENSCAPG00000015128CSDE110060.587ENSHGLG00000019549-10060.587Heterocephalus_glaber_female
ENSCAPG00000015128CSDE19968.005ENSHGLG00100002245-9965.933Heterocephalus_glaber_male
ENSCAPG00000015128CSDE19668.807ENSHGLG00100004833-10068.807Heterocephalus_glaber_male
ENSCAPG00000015128CSDE110061.328ENSHGLG00100001846-10061.198Heterocephalus_glaber_male
ENSCAPG00000015128CSDE110092.982ENSHGLG00100019438-10092.982Heterocephalus_glaber_male
ENSCAPG00000015128CSDE19970.706ENSHGLG00100007287-9870.706Heterocephalus_glaber_male
ENSCAPG00000015128CSDE19465.647ENSHGLG00100004195-9965.647Heterocephalus_glaber_male
ENSCAPG00000015128CSDE19679.273ENSHGLG00100012072-9879.273Heterocephalus_glaber_male
ENSCAPG00000015128CSDE19671.492ENSHGLG00100006910-10071.492Heterocephalus_glaber_male
ENSCAPG00000015128CSDE110075.460ENSHCOG00000004158csde19575.460Hippocampus_comes
ENSCAPG00000015128CSDE110054.239ENSIPUG00000000355csde110054.239Ictalurus_punctatus
ENSCAPG00000015128CSDE110059.429ENSSTOG00000030994-10059.429Ictidomys_tridecemlineatus
ENSCAPG00000015128CSDE18668.346ENSSTOG00000032722-9868.346Ictidomys_tridecemlineatus
ENSCAPG00000015128CSDE110092.982ENSJJAG00000019571Csde110092.982Jaculus_jaculus
ENSCAPG00000015128CSDE110075.460ENSKMAG00000005685csde110075.460Kryptolebias_marmoratus
ENSCAPG00000015128CSDE110068.132ENSLBEG00000014770csde19568.132Labrus_bergylta
ENSCAPG00000015128CSDE110085.976ENSLACG00000018452CSDE19485.976Latimeria_chalumnae
ENSCAPG00000015128CSDE110082.822ENSLOCG00000010413csde19482.822Lepisosteus_oculatus
ENSCAPG00000015128CSDE110067.337ENSLAFG00000007150CSDE19667.337Loxodonta_africana
ENSCAPG00000015128CSDE110091.228ENSMFAG00000003674CSDE19591.228Macaca_fascicularis
ENSCAPG00000015128CSDE110091.228ENSMMUG00000001974CSDE19591.228Macaca_mulatta
ENSCAPG00000015128CSDE110091.228ENSMNEG00000045247CSDE19591.228Macaca_nemestrina
ENSCAPG00000015128CSDE110091.228ENSMLEG00000038673CSDE19591.228Mandrillus_leucophaeus
ENSCAPG00000015128CSDE110069.780ENSMAMG00000008821csde19569.780Mastacembelus_armatus
ENSCAPG00000015128CSDE110076.687ENSMZEG00005021675csde19576.687Maylandia_zebra
ENSCAPG00000015128CSDE19894.479ENSMGAG00000016381CSDE19894.479Meleagris_gallopavo
ENSCAPG00000015128CSDE110092.398ENSMAUG00000014031Csde110092.398Mesocricetus_auratus
ENSCAPG00000015128CSDE110091.228ENSMICG00000002050CSDE19591.228Microcebus_murinus
ENSCAPG00000015128CSDE110092.398ENSMOCG00000018960Csde110092.398Microtus_ochrogaster
ENSCAPG00000015128CSDE110053.808ENSMMOG00000015075csde110053.808Mola_mola
ENSCAPG00000015128CSDE110094.479ENSMODG00000004685CSDE110094.479Monodelphis_domestica
ENSCAPG00000015128CSDE110053.683ENSMALG00000007132csde110053.683Monopterus_albus
ENSCAPG00000015128CSDE110092.398MGP_CAROLIEiJ_G0025444Csde110092.398Mus_caroli
ENSCAPG00000015128CSDE110092.398ENSMUSG00000068823Csde110092.398Mus_musculus
ENSCAPG00000015128CSDE110092.398MGP_PahariEiJ_G0026888Csde110092.398Mus_pahari
ENSCAPG00000015128CSDE110092.398MGP_SPRETEiJ_G0026394Csde110092.398Mus_spretus
ENSCAPG00000015128CSDE19891.813ENSMPUG00000005753CSDE19991.813Mustela_putorius_furo
ENSCAPG00000015128CSDE110068.090ENSMLUG00000005681CSDE19468.090Myotis_lucifugus
ENSCAPG00000015128CSDE17154.795ENSNGAG00000012599-10054.795Nannospalax_galili
ENSCAPG00000015128CSDE110092.398ENSNGAG00000021929Csde110092.398Nannospalax_galili
ENSCAPG00000015128CSDE110060.026ENSNBRG00000020808csde110060.026Neolamprologus_brichardi
ENSCAPG00000015128CSDE110091.228ENSNLEG00000004842CSDE19591.228Nomascus_leucogenys
ENSCAPG00000015128CSDE19873.483ENSMEUG00000002677CSDE110073.483Notamacropus_eugenii
ENSCAPG00000015128CSDE19395.146ENSOPRG00000005002CSDE17695.146Ochotona_princeps
ENSCAPG00000015128CSDE110092.398ENSODEG00000007383-10092.398Octodon_degus
ENSCAPG00000015128CSDE18165.757ENSODEG00000005979-9865.757Octodon_degus
ENSCAPG00000015128CSDE110068.681ENSONIG00000009309csde110068.681Oreochromis_niloticus
ENSCAPG00000015128CSDE19895.092ENSOANG00000003346-8095.092Ornithorhynchus_anatinus
ENSCAPG00000015128CSDE110091.228ENSOCUG00000016438CSDE19591.228Oryctolagus_cuniculus
ENSCAPG00000015128CSDE110069.231ENSORLG00000000707csde110069.231Oryzias_latipes
ENSCAPG00000015128CSDE110077.301ENSORLG00020005148csde19577.301Oryzias_latipes_hni
ENSCAPG00000015128CSDE110077.301ENSORLG00015019415csde19577.301Oryzias_latipes_hsok
ENSCAPG00000015128CSDE110077.301ENSOMEG00000015656csde19577.301Oryzias_melastigma
ENSCAPG00000015128CSDE110068.593ENSOGAG00000012127CSDE19468.593Otolemur_garnettii
ENSCAPG00000015128CSDE110068.593ENSOARG00000020034CSDE19468.593Ovis_aries
ENSCAPG00000015128CSDE110091.228ENSPPAG00000025861CSDE19591.228Pan_paniscus
ENSCAPG00000015128CSDE110091.813ENSPPRG00000006747CSDE19591.813Panthera_pardus
ENSCAPG00000015128CSDE110091.813ENSPTIG00000015468CSDE110091.813Panthera_tigris_altaica
ENSCAPG00000015128CSDE110091.228ENSPTRG00000033721CSDE110091.228Pan_troglodytes
ENSCAPG00000015128CSDE110091.228ENSPANG00000018873CSDE19591.228Papio_anubis
ENSCAPG00000015128CSDE110053.266ENSPKIG00000009459csde110053.266Paramormyrops_kingsleyae
ENSCAPG00000015128CSDE19095.092ENSPSIG00000003823CSDE19695.092Pelodiscus_sinensis
ENSCAPG00000015128CSDE110059.820ENSPMGG00000000772csde110059.820Periophthalmus_magnuspinnatus
ENSCAPG00000015128CSDE110092.982ENSPEMG00000020357-10092.982Peromyscus_maniculatus_bairdii
ENSCAPG00000015128CSDE110094.479ENSPCIG00000022587CSDE110094.479Phascolarctos_cinereus
ENSCAPG00000015128CSDE19873.770ENSPFOG00000012664csde19973.770Poecilia_formosa
ENSCAPG00000015128CSDE19452.848ENSPLAG00000017680csde19352.848Poecilia_latipinna
ENSCAPG00000015128CSDE19552.969ENSPMEG00000005094csde19752.969Poecilia_mexicana
ENSCAPG00000015128CSDE110079.141ENSPREG00000011631csde19579.141Poecilia_reticulata
ENSCAPG00000015128CSDE110091.228ENSPPYG00000000996CSDE110091.228Pongo_abelii
ENSCAPG00000015128CSDE110075.160ENSPCAG00000014368CSDE19475.160Procavia_capensis
ENSCAPG00000015128CSDE110091.228ENSPCOG00000017893CSDE110091.228Propithecus_coquereli
ENSCAPG00000015128CSDE17061.922ENSPCOG00000008223-8561.922Propithecus_coquereli
ENSCAPG00000015128CSDE110072.962ENSPVAG00000008225CSDE19564.573Pteropus_vampyrus
ENSCAPG00000015128CSDE110076.687ENSPNYG00000013745csde19476.687Pundamilia_nyererei
ENSCAPG00000015128CSDE110077.914ENSPNAG00000001958csde19577.914Pygocentrus_nattereri
ENSCAPG00000015128CSDE110072.532ENSRNOG00000061058Csde110072.532Rattus_norvegicus
ENSCAPG00000015128CSDE110091.228ENSRBIG00000038966-9491.228Rhinopithecus_bieti
ENSCAPG00000015128CSDE110088.889ENSRBIG00000038088-9588.889Rhinopithecus_bieti
ENSCAPG00000015128CSDE110091.228ENSRROG00000043101CSDE19591.228Rhinopithecus_roxellana
ENSCAPG00000015128CSDE110091.228ENSSBOG00000035592CSDE19591.228Saimiri_boliviensis_boliviensis
ENSCAPG00000015128CSDE110066.332ENSSHAG00000009831CSDE110066.332Sarcophilus_harrisii
ENSCAPG00000015128CSDE110078.528ENSSFOG00015007498csde110078.528Scleropages_formosus
ENSCAPG00000015128CSDE110067.033ENSSMAG00000007203csde110067.033Scophthalmus_maximus
ENSCAPG00000015128CSDE110068.132ENSSDUG00000015380csde19568.132Seriola_dumerili
ENSCAPG00000015128CSDE110076.074ENSSLDG00000008819csde110076.074Seriola_lalandi_dorsalis
ENSCAPG00000015128CSDE110068.687ENSSARG00000000738CSDE19468.687Sorex_araneus
ENSCAPG00000015128CSDE110095.092ENSSPUG00000008714CSDE110095.092Sphenodon_punctatus
ENSCAPG00000015128CSDE110077.914ENSSPAG00000000716csde19577.914Stegastes_partitus
ENSCAPG00000015128CSDE110091.813ENSSSCG00000006752CSDE19591.813Sus_scrofa
ENSCAPG00000015128CSDE110095.706ENSTGUG00000000972CSDE110095.706Taeniopygia_guttata
ENSCAPG00000015128CSDE110052.125ENSTRUG00000007996csde110052.125Takifugu_rubripes
ENSCAPG00000015128CSDE17176.687ENSTNIG00000010878csde110076.687Tetraodon_nigroviridis
ENSCAPG00000015128CSDE110068.216ENSTTRG00000015583CSDE19468.216Tursiops_truncatus
ENSCAPG00000015128CSDE17081.818ENSUAMG00000021779-9881.818Ursus_americanus
ENSCAPG00000015128CSDE18970.252ENSUAMG00000024289-9970.252Ursus_americanus
ENSCAPG00000015128CSDE17677.197ENSUMAG00000011714-9977.197Ursus_maritimus
ENSCAPG00000015128CSDE110066.365ENSUMAG00000009720-9766.365Ursus_maritimus
ENSCAPG00000015128CSDE19879.343ENSVPAG00000000749CSDE17979.343Vicugna_pacos
ENSCAPG00000015128CSDE19291.813ENSVVUG00000009890CSDE19491.813Vulpes_vulpes
ENSCAPG00000015128CSDE110090.184ENSXETG00000021448csde110090.184Xenopus_tropicalis
ENSCAPG00000015128CSDE19347.612ENSXCOG00000000035csde19947.612Xiphophorus_couchianus
ENSCAPG00000015128CSDE110079.141ENSXMAG00000009080csde19579.141Xiphophorus_maculatus

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