EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000015217 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Minus strand
Length
147616 bases
Position
chrAVPZ01000778.1:2398051-2545666
Accession
9349
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61112
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61212
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61312
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61412
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61512
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61612
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61712
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61812
ENSCAPP00000014990zf-C2H2PF00096.261.7e-61912
ENSCAPP00000014990zf-C2H2PF00096.261.7e-611012
ENSCAPP00000014990zf-C2H2PF00096.261.7e-611112
ENSCAPP00000014990zf-C2H2PF00096.261.7e-611212
ENSCAPP00000014996zf-C2H2PF00096.261.2e-2715
ENSCAPP00000014996zf-C2H2PF00096.261.2e-2725
ENSCAPP00000014996zf-C2H2PF00096.261.2e-2735
ENSCAPP00000014996zf-C2H2PF00096.261.2e-2745
ENSCAPP00000014996zf-C2H2PF00096.261.2e-2755
ENSCAPP00000014990zf-metPF12874.71.3e-2014
ENSCAPP00000014990zf-metPF12874.71.3e-2024
ENSCAPP00000014990zf-metPF12874.71.3e-2034
ENSCAPP00000014990zf-metPF12874.71.3e-2044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000018770PRDM5-2011815-ENSCAPP00000014990604 (aa)--
ENSCAPT00000018776PRDM5-202573-ENSCAPP00000014996190 (aa)-UPI000BAD47C7
Gene Model
Click here to download ENSCAPG00000015217's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015217's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000015217PRDM58139.189ENSCAPG00000012873ZBTB66038.554
ENSCAPG00000015217PRDM57745.794ENSCAPG00000010404GFI1B6138.732
ENSCAPG00000015217PRDM57546.809ENSCAPG00000017499ZNF27944.910
ENSCAPG00000015217PRDM58544.218ENSCAPG00000012228ZBTB485336.237
ENSCAPG00000015217PRDM57533.113ENSCAPG00000015862GTF3A9134.731
ENSCAPG00000015217PRDM57650.000ENSCAPG00000012135SALL45242.308
ENSCAPG00000015217PRDM59346.739ENSCAPG00000009816ZNF2365646.739
ENSCAPG00000015217PRDM58737.692ENSCAPG00000009522ZNF8656637.692
ENSCAPG00000015217PRDM58646.939ENSCAPG00000002667-7446.939
ENSCAPG00000015217PRDM58441.176ENSCAPG00000000623ZNF7709330.870
ENSCAPG00000015217PRDM58544.231ENSCAPG00000000389ZNF5745346.667
ENSCAPG00000015217PRDM56949.180ENSCAPG00000005317ZNF3675737.931
ENSCAPG00000015217PRDM57736.620ENSCAPG00000000196ZFP645134.842
ENSCAPG00000015217PRDM58341.176ENSCAPG00000007129ZNF3198839.583
ENSCAPG00000015217PRDM58340.566ENSCAPG00000013078SNAI27240.146
ENSCAPG00000015217PRDM56335.000ENSCAPG00000007934-6835.385
ENSCAPG00000015217PRDM55941.096ENSCAPG00000005775OVOL28638.667
ENSCAPG00000015217PRDM58141.818ENSCAPG00000014002SNAI15441.818
ENSCAPG00000015217PRDM58345.714ENSCAPG00000013118-7245.714
ENSCAPG00000015217PRDM58947.887ENSCAPG00000003129-8047.887
ENSCAPG00000015217PRDM58448.696ENSCAPG00000006920-8648.696
ENSCAPG00000015217PRDM57846.789ENSCAPG00000016268-10046.789
ENSCAPG00000015217PRDM58445.578ENSCAPG00000016810ZFP699644.970
ENSCAPG00000015217PRDM57840.517ENSCAPG00000012608-6840.580
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000015217PRDM510098.667ENSG00000138738PRDM59098.667Homo_sapiens
ENSCAPG00000015217PRDM510088.667ENSAPOG00000023220prdm59088.667Acanthochromis_polyacanthus
ENSCAPG00000015217PRDM510082.895ENSAMEG00000003050PRDM510085.340Ailuropoda_melanoleuca
ENSCAPG00000015217PRDM59788.667ENSACIG00000000406prdm59188.667Amphilophus_citrinellus
ENSCAPG00000015217PRDM510088.667ENSAOCG00000014806prdm59088.667Amphiprion_ocellaris
ENSCAPG00000015217PRDM59966.613ENSAPEG00000016846prdm59867.747Amphiprion_percula
ENSCAPG00000015217PRDM510088.667ENSATEG00000013829prdm59088.667Anabas_testudineus
ENSCAPG00000015217PRDM510089.333ENSAPLG00000013828PRDM59589.333Anas_platyrhynchos
ENSCAPG00000015217PRDM59389.333ENSACAG00000012999PRDM59572.712Anolis_carolinensis
ENSCAPG00000015217PRDM510099.474ENSANAG00000027411PRDM59198.667Aotus_nancymaae
ENSCAPG00000015217PRDM510088.667ENSACLG00000017996prdm59088.667Astatotilapia_calliptera
ENSCAPG00000015217PRDM58888.000ENSAMXG00000041864prdm59974.157Astyanax_mexicanus
ENSCAPG00000015217PRDM510096.667ENSBTAG00000012111PRDM59983.866Bos_taurus
ENSCAPG00000015217PRDM510098.947ENSCJAG00000003133PRDM59198.000Callithrix_jacchus
ENSCAPG00000015217PRDM510093.939ENSCAFG00000004179PRDM59593.939Canis_familiaris
ENSCAPG00000015217PRDM510098.000ENSCAFG00020017685PRDM59198.000Canis_lupus_dingo
ENSCAPG00000015217PRDM510096.000ENSCHIG00000018772PRDM59096.000Capra_hircus
ENSCAPG00000015217PRDM59996.875ENSTSYG00000009630PRDM59096.875Carlito_syrichta
ENSCAPG00000015217PRDM5100100.000ENSCPOG00000012883PRDM5100100.000Cavia_porcellus
ENSCAPG00000015217PRDM510099.474ENSCCAG00000023157PRDM59198.667Cebus_capucinus
ENSCAPG00000015217PRDM510099.474ENSCATG00000042510PRDM59098.667Cercocebus_atys
ENSCAPG00000015217PRDM5100100.000ENSCLAG00000005392PRDM5100100.000Chinchilla_lanigera
ENSCAPG00000015217PRDM510098.667ENSCSAG00000003729PRDM59890.756Chlorocebus_sabaeus
ENSCAPG00000015217PRDM510098.000ENSCHOG00000007801PRDM58098.000Choloepus_hoffmanni
ENSCAPG00000015217PRDM510089.333ENSCPBG00000024735PRDM59189.333Chrysemys_picta_bellii
ENSCAPG00000015217PRDM510099.474ENSCANG00000036807PRDM59198.667Colobus_angolensis_palliatus
ENSCAPG00000015217PRDM510097.368ENSCGRG00001010581Prdm59597.468Cricetulus_griseus_chok1gshd
ENSCAPG00000015217PRDM510096.667ENSCGRG00000010996-9496.667Cricetulus_griseus_crigri
ENSCAPG00000015217PRDM510088.000ENSCSEG00000019979prdm59088.000Cynoglossus_semilaevis
ENSCAPG00000015217PRDM510088.667ENSCVAG00000013692prdm59088.667Cyprinodon_variegatus
ENSCAPG00000015217PRDM59890.411ENSDARG00000006288prdm58590.411Danio_rerio
ENSCAPG00000015217PRDM510096.026ENSDNOG00000002009PRDM59496.026Dasypus_novemcinctus
ENSCAPG00000015217PRDM510097.333ENSDORG00000007739Prdm58097.333Dipodomys_ordii
ENSCAPG00000015217PRDM510098.291ENSETEG00000020268PRDM57098.291Echinops_telfairi
ENSCAPG00000015217PRDM59989.262ENSEBUG00000004301prdm59089.262Eptatretus_burgeri
ENSCAPG00000015217PRDM510098.947ENSEASG00005018365PRDM59098.000Equus_asinus_asinus
ENSCAPG00000015217PRDM510081.013ENSECAG00000024747-9884.663Equus_caballus
ENSCAPG00000015217PRDM59993.750ENSECAG00000011516PRDM58887.819Equus_caballus
ENSCAPG00000015217PRDM59995.833ENSEEUG00000010306PRDM59095.833Erinaceus_europaeus
ENSCAPG00000015217PRDM59791.803ENSELUG00000005894prdm57791.803Esox_lucius
ENSCAPG00000015217PRDM510097.333ENSFCAG00000025656PRDM59197.333Felis_catus
ENSCAPG00000015217PRDM58965.636ENSFALG00000008381PRDM59065.636Ficedula_albicollis
ENSCAPG00000015217PRDM510099.474ENSFDAG00000021361PRDM59890.420Fukomys_damarensis
ENSCAPG00000015217PRDM59890.411ENSFHEG00000013040prdm58990.411Fundulus_heteroclitus
ENSCAPG00000015217PRDM58691.667ENSGMOG00000012038prdm510091.667Gadus_morhua
ENSCAPG00000015217PRDM510089.333ENSGALG00000011963PRDM59189.333Gallus_gallus
ENSCAPG00000015217PRDM59791.803ENSGAFG00000019233prdm59872.148Gambusia_affinis
ENSCAPG00000015217PRDM59791.803ENSGAGG00000020362PRDM58991.803Gopherus_agassizii
ENSCAPG00000015217PRDM510099.474ENSGGOG00000013562PRDM59098.667Gorilla_gorilla
ENSCAPG00000015217PRDM510088.667ENSHBUG00000023375prdm59088.667Haplochromis_burtoni
ENSCAPG00000015217PRDM59981.646ENSHGLG00000003010PRDM59889.557Heterocephalus_glaber_female
ENSCAPG00000015217PRDM5100100.000ENSHGLG00100003696PRDM59890.252Heterocephalus_glaber_male
ENSCAPG00000015217PRDM59989.262ENSHCOG00000012131prdm58589.262Hippocampus_comes
ENSCAPG00000015217PRDM59792.708ENSIPUG00000001248prdm58588.667Ictalurus_punctatus
ENSCAPG00000015217PRDM510096.842ENSSTOG00000004741PRDM510096.842Ictidomys_tridecemlineatus
ENSCAPG00000015217PRDM510098.667ENSJJAG00000011464Prdm510098.667Jaculus_jaculus
ENSCAPG00000015217PRDM510088.000ENSKMAG00000013663prdm59088.000Kryptolebias_marmoratus
ENSCAPG00000015217PRDM510088.667ENSLBEG00000022736prdm59088.667Labrus_bergylta
ENSCAPG00000015217PRDM510089.333ENSLACG00000009187PRDM59989.333Latimeria_chalumnae
ENSCAPG00000015217PRDM59989.262ENSLOCG00000009778prdm59089.262Lepisosteus_oculatus
ENSCAPG00000015217PRDM510097.333ENSLAFG00000006532PRDM59797.333Loxodonta_africana
ENSCAPG00000015217PRDM510099.474ENSMFAG00000045845PRDM59098.667Macaca_fascicularis
ENSCAPG00000015217PRDM510099.474ENSMMUG00000003249PRDM59098.667Macaca_mulatta
ENSCAPG00000015217PRDM510099.474ENSMNEG00000019018PRDM59098.667Macaca_nemestrina
ENSCAPG00000015217PRDM510098.667ENSMLEG00000023145PRDM59598.667Mandrillus_leucophaeus
ENSCAPG00000015217PRDM510088.000ENSMAMG00000013419prdm59088.000Mastacembelus_armatus
ENSCAPG00000015217PRDM510088.667ENSMZEG00005020645prdm59088.667Maylandia_zebra
ENSCAPG00000015217PRDM510089.333ENSMGAG00000010710PRDM59089.333Meleagris_gallopavo
ENSCAPG00000015217PRDM510097.368ENSMAUG00000006768Prdm59597.468Mesocricetus_auratus
ENSCAPG00000015217PRDM510099.474ENSMICG00000001459PRDM59199.333Microcebus_murinus
ENSCAPG00000015217PRDM510097.368ENSMOCG00000016267Prdm59597.468Microtus_ochrogaster
ENSCAPG00000015217PRDM510088.667ENSMMOG00000006035prdm59088.667Mola_mola
ENSCAPG00000015217PRDM510088.667ENSMODG00000018942PRDM59188.667Monodelphis_domestica
ENSCAPG00000015217PRDM510088.667ENSMALG00000013934prdm59088.667Monopterus_albus
ENSCAPG00000015217PRDM510097.895MGP_CAROLIEiJ_G0028463Prdm59597.785Mus_caroli
ENSCAPG00000015217PRDM510097.895ENSMUSG00000029913Prdm59597.468Mus_musculus
ENSCAPG00000015217PRDM510097.895MGP_PahariEiJ_G0022203Prdm59597.785Mus_pahari
ENSCAPG00000015217PRDM510097.895MGP_SPRETEiJ_G0029467Prdm59597.468Mus_spretus
ENSCAPG00000015217PRDM510097.333ENSMPUG00000017415PRDM59984.824Mustela_putorius_furo
ENSCAPG00000015217PRDM510082.468ENSMLUG00000006097PRDM510080.379Myotis_lucifugus
ENSCAPG00000015217PRDM510097.368ENSNGAG00000018317Prdm58697.368Nannospalax_galili
ENSCAPG00000015217PRDM59966.446ENSNBRG00000004976prdm59871.739Neolamprologus_brichardi
ENSCAPG00000015217PRDM510099.474ENSNLEG00000009107PRDM59098.667Nomascus_leucogenys
ENSCAPG00000015217PRDM57275.641ENSMEUG00000006576-6175.641Notamacropus_eugenii
ENSCAPG00000015217PRDM58795.817ENSOPRG00000011066-8966.530Ochotona_princeps
ENSCAPG00000015217PRDM510099.474ENSODEG00000009133PRDM58799.333Octodon_degus
ENSCAPG00000015217PRDM510088.667ENSONIG00000003111prdm58588.667Oreochromis_niloticus
ENSCAPG00000015217PRDM57986.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSCAPG00000015217PRDM59790.909ENSOANG00000015109PRDM58690.909Ornithorhynchus_anatinus
ENSCAPG00000015217PRDM59080.903ENSOCUG00000013454PRDM59882.639Oryctolagus_cuniculus
ENSCAPG00000015217PRDM510088.667ENSORLG00000016247prdm59088.667Oryzias_latipes
ENSCAPG00000015217PRDM510088.667ENSORLG00020018051prdm59088.667Oryzias_latipes_hni
ENSCAPG00000015217PRDM510088.667ENSORLG00015013760prdm59088.667Oryzias_latipes_hsok
ENSCAPG00000015217PRDM510088.667ENSOMEG00000005143prdm59088.667Oryzias_melastigma
ENSCAPG00000015217PRDM58999.333ENSOGAG00000009996PRDM59399.333Otolemur_garnettii
ENSCAPG00000015217PRDM59794.000ENSOARG00000015473PRDM59984.649Ovis_aries
ENSCAPG00000015217PRDM510098.667ENSPPAG00000043045PRDM59597.917Pan_paniscus
ENSCAPG00000015217PRDM510097.333ENSPPRG00000001020PRDM59197.333Panthera_pardus
ENSCAPG00000015217PRDM510097.333ENSPTIG00000010807PRDM59197.333Panthera_tigris_altaica
ENSCAPG00000015217PRDM510099.474ENSPTRG00000016403PRDM59098.667Pan_troglodytes
ENSCAPG00000015217PRDM510099.474ENSPANG00000023612PRDM59098.667Papio_anubis
ENSCAPG00000015217PRDM510087.288ENSPKIG00000015492prdm58987.288Paramormyrops_kingsleyae
ENSCAPG00000015217PRDM510089.333ENSPSIG00000013505PRDM59189.333Pelodiscus_sinensis
ENSCAPG00000015217PRDM510088.000ENSPMGG00000012622prdm59088.000Periophthalmus_magnuspinnatus
ENSCAPG00000015217PRDM57890.722ENSPMAG00000005248prdm510090.722Petromyzon_marinus
ENSCAPG00000015217PRDM58967.027ENSPFOG00000018630prdm59769.459Poecilia_formosa
ENSCAPG00000015217PRDM510088.667ENSPLAG00000014148prdm58588.667Poecilia_latipinna
ENSCAPG00000015217PRDM510088.667ENSPMEG00000018002prdm59088.667Poecilia_mexicana
ENSCAPG00000015217PRDM510088.667ENSPREG00000018366prdm59088.667Poecilia_reticulata
ENSCAPG00000015217PRDM510098.667ENSPPYG00000015031PRDM59985.783Pongo_abelii
ENSCAPG00000015217PRDM510097.333ENSPCAG00000011671PRDM59597.333Procavia_capensis
ENSCAPG00000015217PRDM5100100.000ENSPCOG00000022828PRDM59099.333Propithecus_coquereli
ENSCAPG00000015217PRDM510092.000ENSPVAG00000012309PRDM59592.000Pteropus_vampyrus
ENSCAPG00000015217PRDM510088.667ENSPNYG00000012194prdm59088.667Pundamilia_nyererei
ENSCAPG00000015217PRDM59886.301ENSPNAG00000023191-9686.301Pygocentrus_nattereri
ENSCAPG00000015217PRDM59890.411ENSPNAG00000026181prdm58590.411Pygocentrus_nattereri
ENSCAPG00000015217PRDM59989.815ENSRNOG00000023679Prdm59685.475Rattus_norvegicus
ENSCAPG00000015217PRDM510099.474ENSRBIG00000041307PRDM59098.667Rhinopithecus_bieti
ENSCAPG00000015217PRDM510093.210ENSRROG00000035343PRDM59593.210Rhinopithecus_roxellana
ENSCAPG00000015217PRDM510098.947ENSSBOG00000022100PRDM59198.667Saimiri_boliviensis_boliviensis
ENSCAPG00000015217PRDM59890.164ENSSHAG00000003250PRDM59990.164Sarcophilus_harrisii
ENSCAPG00000015217PRDM510089.333ENSSFOG00015020478prdm59089.333Scleropages_formosus
ENSCAPG00000015217PRDM510088.667ENSSMAG00000018844prdm59088.667Scophthalmus_maximus
ENSCAPG00000015217PRDM59991.803ENSSDUG00000020397prdm59088.667Seriola_dumerili
ENSCAPG00000015217PRDM59992.784ENSSLDG00000013353prdm59088.667Seriola_lalandi_dorsalis
ENSCAPG00000015217PRDM510097.436ENSSARG00000014129-6897.436Sorex_araneus
ENSCAPG00000015217PRDM510091.053ENSSPUG00000009941PRDM59188.667Sphenodon_punctatus
ENSCAPG00000015217PRDM510088.667ENSSPAG00000013866prdm58588.667Stegastes_partitus
ENSCAPG00000015217PRDM510098.658ENSSSCG00000009101PRDM59598.000Sus_scrofa
ENSCAPG00000015217PRDM510089.333ENSTGUG00000001920PRDM59589.333Taeniopygia_guttata
ENSCAPG00000015217PRDM510088.667ENSTRUG00000013850prdm59088.667Takifugu_rubripes
ENSCAPG00000015217PRDM510074.834ENSTNIG00000005901prdm59860.637Tetraodon_nigroviridis
ENSCAPG00000015217PRDM510076.510ENSTBEG00000015386PRDM58678.474Tupaia_belangeri
ENSCAPG00000015217PRDM510097.333ENSTTRG00000010996PRDM59984.345Tursiops_truncatus
ENSCAPG00000015217PRDM510089.706ENSUAMG00000009994PRDM58889.706Ursus_americanus
ENSCAPG00000015217PRDM510098.000ENSUMAG00000003733PRDM59498.000Ursus_maritimus
ENSCAPG00000015217PRDM510082.000ENSVPAG00000007435PRDM59878.203Vicugna_pacos
ENSCAPG00000015217PRDM510098.000ENSVVUG00000013192PRDM59798.000Vulpes_vulpes
ENSCAPG00000015217PRDM510082.270ENSXETG00000002101prdm59182.270Xenopus_tropicalis
ENSCAPG00000015217PRDM510088.667ENSXCOG00000008567prdm59088.667Xiphophorus_couchianus
ENSCAPG00000015217PRDM59791.803ENSXMAG00000013825prdm59088.667Xiphophorus_maculatus

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