EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015467 (Gene tree)
Gene ID: -
Gene Symbol: TRMT6
Alias: CGI-09|GCD10|Gcd10p|MGC5029
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 5959 bases
Position: chrAVPZ01000889.1:19181525-19187483
Accession: 20900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015321	Gcd10p	PF04189.13	1.7e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019103	TRMT6-201	1335	-	ENSCAPP00000015321	444 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015467	TRMT6	93	86.473	ENSG00000089195	TRMT6	100	84.709	Homo_sapiens
ENSCAPG00000015467	TRMT6	93	57.349	ENSAPOG00000008036	trmt6	84	58.313	Acanthochromis_polyacanthus
ENSCAPG00000015467	TRMT6	93	87.198	ENSAMEG00000010635	TRMT6	83	87.198	Ailuropoda_melanoleuca
ENSCAPG00000015467	TRMT6	93	53.995	ENSACIG00000004608	trmt6	81	54.523	Amphilophus_citrinellus
ENSCAPG00000015467	TRMT6	93	56.553	ENSAOCG00000024322	trmt6	82	56.416	Amphiprion_ocellaris
ENSCAPG00000015467	TRMT6	93	58.738	ENSAPEG00000017334	trmt6	84	58.596	Amphiprion_percula
ENSCAPG00000015467	TRMT6	93	57.971	ENSATEG00000018498	trmt6	87	58.981	Anabas_testudineus
ENSCAPG00000015467	TRMT6	92	74.515	ENSAPLG00000007761	TRMT6	89	74.515	Anas_platyrhynchos
ENSCAPG00000015467	TRMT6	93	68.116	ENSACAG00000000575	TRMT6	84	68.116	Anolis_carolinensis
ENSCAPG00000015467	TRMT6	93	86.473	ENSANAG00000021260	TRMT6	83	86.473	Aotus_nancymaae
ENSCAPG00000015467	TRMT6	92	55.206	ENSACLG00000026034	trmt6	82	54.916	Astatotilapia_calliptera
ENSCAPG00000015467	TRMT6	93	57.794	ENSAMXG00000017116	trmt6	81	57.971	Astyanax_mexicanus
ENSCAPG00000015467	TRMT6	93	86.715	ENSBTAG00000001314	TRMT6	83	86.715	Bos_taurus
ENSCAPG00000015467	TRMT6	93	85.990	ENSCJAG00000021296	TRMT6	83	85.990	Callithrix_jacchus
ENSCAPG00000015467	TRMT6	93	86.957	ENSCAFG00000005969	TRMT6	83	86.957	Canis_familiaris
ENSCAPG00000015467	TRMT6	93	86.715	ENSCAFG00020000777	TRMT6	83	86.715	Canis_lupus_dingo
ENSCAPG00000015467	TRMT6	93	86.232	ENSCHIG00000010338	TRMT6	83	86.232	Capra_hircus
ENSCAPG00000015467	TRMT6	93	86.473	ENSTSYG00000004286	TRMT6	83	86.473	Carlito_syrichta
ENSCAPG00000015467	TRMT6	93	99.517	ENSCPOG00000013809	TRMT6	83	99.517	Cavia_porcellus
ENSCAPG00000015467	TRMT6	93	86.232	ENSCCAG00000026939	TRMT6	83	86.232	Cebus_capucinus
ENSCAPG00000015467	TRMT6	93	86.232	ENSCATG00000041111	TRMT6	83	86.232	Cercocebus_atys
ENSCAPG00000015467	TRMT6	93	92.271	ENSCLAG00000013978	TRMT6	83	92.271	Chinchilla_lanigera
ENSCAPG00000015467	TRMT6	93	86.715	ENSCSAG00000013461	TRMT6	83	86.715	Chlorocebus_sabaeus
ENSCAPG00000015467	TRMT6	75	75.000	ENSCHOG00000012537	TRMT6	66	75.000	Choloepus_hoffmanni
ENSCAPG00000015467	TRMT6	91	73.775	ENSCPBG00000023406	TRMT6	84	74.155	Chrysemys_picta_bellii
ENSCAPG00000015467	TRMT6	86	36.031	ENSCING00000002472	-	76	35.135	Ciona_intestinalis
ENSCAPG00000015467	TRMT6	86	42.199	ENSCSAVG00000001680	-	83	41.534	Ciona_savignyi
ENSCAPG00000015467	TRMT6	93	85.990	ENSCANG00000002381	TRMT6	83	85.990	Colobus_angolensis_palliatus
ENSCAPG00000015467	TRMT6	93	85.507	ENSCGRG00001003385	Trmt6	83	85.507	Cricetulus_griseus_chok1gshd
ENSCAPG00000015467	TRMT6	93	85.507	ENSCGRG00000006540	Trmt6	83	85.507	Cricetulus_griseus_crigri
ENSCAPG00000015467	TRMT6	93	57.933	ENSCSEG00000002228	trmt6	83	57.933	Cynoglossus_semilaevis
ENSCAPG00000015467	TRMT6	93	55.370	ENSCVAG00000000341	trmt6	84	55.370	Cyprinodon_variegatus
ENSCAPG00000015467	TRMT6	93	57.590	ENSDARG00000042344	trmt6	82	57.590	Danio_rerio
ENSCAPG00000015467	TRMT6	93	81.235	ENSDNOG00000012785	TRMT6	84	81.235	Dasypus_novemcinctus
ENSCAPG00000015467	TRMT6	93	86.957	ENSDORG00000006458	Trmt6	84	86.957	Dipodomys_ordii
ENSCAPG00000015467	TRMT6	83	32.105	FBgn0031832	CG9596	75	31.063	Drosophila_melanogaster
ENSCAPG00000015467	TRMT6	55	49.590	ENSETEG00000017282	-	72	49.590	Echinops_telfairi
ENSCAPG00000015467	TRMT6	58	90.909	ENSETEG00000003490	-	52	90.909	Echinops_telfairi
ENSCAPG00000015467	TRMT6	93	87.681	ENSEASG00005001411	TRMT6	84	87.681	Equus_asinus_asinus
ENSCAPG00000015467	TRMT6	93	87.681	ENSECAG00000023914	TRMT6	83	87.681	Equus_caballus
ENSCAPG00000015467	TRMT6	93	84.262	ENSEEUG00000006635	TRMT6	83	84.262	Erinaceus_europaeus
ENSCAPG00000015467	TRMT6	94	58.275	ENSELUG00000013378	trmt6	68	60.349	Esox_lucius
ENSCAPG00000015467	TRMT6	93	87.198	ENSFCAG00000003102	TRMT6	83	87.198	Felis_catus
ENSCAPG00000015467	TRMT6	90	72.886	ENSFALG00000013575	TRMT6	88	73.966	Ficedula_albicollis
ENSCAPG00000015467	TRMT6	93	91.304	ENSFDAG00000015117	TRMT6	83	91.304	Fukomys_damarensis
ENSCAPG00000015467	TRMT6	92	56.280	ENSFHEG00000019957	trmt6	84	55.875	Fundulus_heteroclitus
ENSCAPG00000015467	TRMT6	65	68.627	ENSGMOG00000011059	trmt6	80	67.914	Gadus_morhua
ENSCAPG00000015467	TRMT6	91	73.333	ENSGALG00000009169	TRMT6	83	73.236	Gallus_gallus
ENSCAPG00000015467	TRMT6	93	54.762	ENSGAFG00000008618	trmt6	84	54.632	Gambusia_affinis
ENSCAPG00000015467	TRMT6	92	55.392	ENSGACG00000012471	trmt6	84	55.610	Gasterosteus_aculeatus
ENSCAPG00000015467	TRMT6	93	72.947	ENSGAGG00000008464	TRMT6	89	73.430	Gopherus_agassizii
ENSCAPG00000015467	TRMT6	93	86.957	ENSGGOG00000008597	TRMT6	83	86.957	Gorilla_gorilla
ENSCAPG00000015467	TRMT6	92	54.964	ENSHBUG00000016631	trmt6	83	54.676	Haplochromis_burtoni
ENSCAPG00000015467	TRMT6	93	90.338	ENSHGLG00000015405	TRMT6	83	90.338	Heterocephalus_glaber_female
ENSCAPG00000015467	TRMT6	93	90.338	ENSHGLG00100004120	TRMT6	83	90.338	Heterocephalus_glaber_male
ENSCAPG00000015467	TRMT6	93	57.767	ENSHCOG00000000118	trmt6	85	57.381	Hippocampus_comes
ENSCAPG00000015467	TRMT6	92	59.902	ENSIPUG00000019365	trmt6	82	60.391	Ictalurus_punctatus
ENSCAPG00000015467	TRMT6	93	88.647	ENSSTOG00000006863	TRMT6	83	88.647	Ictidomys_tridecemlineatus
ENSCAPG00000015467	TRMT6	93	86.165	ENSJJAG00000007315	Trmt6	82	86.165	Jaculus_jaculus
ENSCAPG00000015467	TRMT6	92	56.448	ENSKMAG00000001295	trmt6	83	57.627	Kryptolebias_marmoratus
ENSCAPG00000015467	TRMT6	93	56.115	ENSLBEG00000025654	trmt6	84	56.250	Labrus_bergylta
ENSCAPG00000015467	TRMT6	93	67.711	ENSLACG00000016478	TRMT6	83	67.711	Latimeria_chalumnae
ENSCAPG00000015467	TRMT6	93	63.835	ENSLOCG00000016451	trmt6	83	63.835	Lepisosteus_oculatus
ENSCAPG00000015467	TRMT6	93	85.266	ENSLAFG00000032216	TRMT6	83	85.266	Loxodonta_africana
ENSCAPG00000015467	TRMT6	93	86.715	ENSMFAG00000044360	TRMT6	83	86.715	Macaca_fascicularis
ENSCAPG00000015467	TRMT6	93	86.715	ENSMMUG00000013728	TRMT6	83	86.715	Macaca_mulatta
ENSCAPG00000015467	TRMT6	93	86.473	ENSMNEG00000041831	TRMT6	83	86.473	Macaca_nemestrina
ENSCAPG00000015467	TRMT6	93	86.232	ENSMLEG00000040762	TRMT6	83	86.232	Mandrillus_leucophaeus
ENSCAPG00000015467	TRMT6	93	55.581	ENSMAMG00000012101	trmt6	84	57.042	Mastacembelus_armatus
ENSCAPG00000015467	TRMT6	92	54.964	ENSMZEG00005010771	trmt6	82	54.676	Maylandia_zebra
ENSCAPG00000015467	TRMT6	91	73.580	ENSMGAG00000007678	TRMT6	83	73.479	Meleagris_gallopavo
ENSCAPG00000015467	TRMT6	93	85.990	ENSMAUG00000008719	Trmt6	83	85.990	Mesocricetus_auratus
ENSCAPG00000015467	TRMT6	93	86.715	ENSMICG00000011626	TRMT6	83	86.715	Microcebus_murinus
ENSCAPG00000015467	TRMT6	93	85.749	ENSMOCG00000022320	Trmt6	83	85.749	Microtus_ochrogaster
ENSCAPG00000015467	TRMT6	93	55.314	ENSMMOG00000004412	trmt6	82	55.314	Mola_mola
ENSCAPG00000015467	TRMT6	95	75.414	ENSMODG00000003784	TRMT6	85	75.414	Monodelphis_domestica
ENSCAPG00000015467	TRMT6	95	52.844	ENSMALG00000018140	trmt6	83	52.844	Monopterus_albus
ENSCAPG00000015467	TRMT6	93	85.472	MGP_CAROLIEiJ_G0024344	Trmt6	83	85.472	Mus_caroli
ENSCAPG00000015467	TRMT6	93	85.749	ENSMUSG00000037376	Trmt6	83	85.749	Mus_musculus
ENSCAPG00000015467	TRMT6	93	85.507	MGP_PahariEiJ_G0025789	Trmt6	83	85.507	Mus_pahari
ENSCAPG00000015467	TRMT6	93	85.507	MGP_SPRETEiJ_G0025264	Trmt6	83	85.507	Mus_spretus
ENSCAPG00000015467	TRMT6	79	87.179	ENSMPUG00000006317	TRMT6	75	87.179	Mustela_putorius_furo
ENSCAPG00000015467	TRMT6	93	86.473	ENSMLUG00000006491	TRMT6	83	86.473	Myotis_lucifugus
ENSCAPG00000015467	TRMT6	93	86.232	ENSNGAG00000015251	Trmt6	83	86.232	Nannospalax_galili
ENSCAPG00000015467	TRMT6	92	53.431	ENSNBRG00000020261	trmt6	81	53.301	Neolamprologus_brichardi
ENSCAPG00000015467	TRMT6	93	86.715	ENSNLEG00000013957	TRMT6	83	86.715	Nomascus_leucogenys
ENSCAPG00000015467	TRMT6	81	75.556	ENSMEUG00000009179	TRMT6	85	75.556	Notamacropus_eugenii
ENSCAPG00000015467	TRMT6	93	83.575	ENSOPRG00000008564	TRMT6	84	83.575	Ochotona_princeps
ENSCAPG00000015467	TRMT6	93	91.546	ENSODEG00000005657	TRMT6	83	91.546	Octodon_degus
ENSCAPG00000015467	TRMT6	92	56.039	ENSONIG00000000968	trmt6	83	55.904	Oreochromis_niloticus
ENSCAPG00000015467	TRMT6	93	77.778	ENSOANG00000008403	-	90	77.778	Ornithorhynchus_anatinus
ENSCAPG00000015467	TRMT6	93	86.473	ENSOCUG00000014669	TRMT6	83	86.473	Oryctolagus_cuniculus
ENSCAPG00000015467	TRMT6	81	56.986	ENSORLG00000009862	trmt6	75	56.986	Oryzias_latipes
ENSCAPG00000015467	TRMT6	91	54.680	ENSORLG00020001466	trmt6	82	54.680	Oryzias_latipes_hni
ENSCAPG00000015467	TRMT6	81	58.011	ENSORLG00015015552	trmt6	75	57.534	Oryzias_latipes_hsok
ENSCAPG00000015467	TRMT6	92	54.146	ENSOMEG00000019874	trmt6	82	54.390	Oryzias_melastigma
ENSCAPG00000015467	TRMT6	93	84.578	ENSOGAG00000012950	TRMT6	83	84.578	Otolemur_garnettii
ENSCAPG00000015467	TRMT6	93	86.473	ENSOARG00000017993	TRMT6	83	86.473	Ovis_aries
ENSCAPG00000015467	TRMT6	93	86.506	ENSPPAG00000036809	TRMT6	83	86.506	Pan_paniscus
ENSCAPG00000015467	TRMT6	93	87.440	ENSPPRG00000000424	TRMT6	83	87.440	Panthera_pardus
ENSCAPG00000015467	TRMT6	93	87.440	ENSPTIG00000010629	TRMT6	83	87.440	Panthera_tigris_altaica
ENSCAPG00000015467	TRMT6	93	86.957	ENSPTRG00000013231	TRMT6	100	85.321	Pan_troglodytes
ENSCAPG00000015467	TRMT6	93	86.473	ENSPANG00000009284	TRMT6	83	86.473	Papio_anubis
ENSCAPG00000015467	TRMT6	93	59.662	ENSPKIG00000003441	trmt6	83	58.173	Paramormyrops_kingsleyae
ENSCAPG00000015467	TRMT6	91	72.861	ENSPSIG00000017048	TRMT6	84	72.771	Pelodiscus_sinensis
ENSCAPG00000015467	TRMT6	82	58.311	ENSPMGG00000021074	trmt6	74	58.311	Periophthalmus_magnuspinnatus
ENSCAPG00000015467	TRMT6	93	84.783	ENSPEMG00000023268	Trmt6	83	84.783	Peromyscus_maniculatus_bairdii
ENSCAPG00000015467	TRMT6	95	75.650	ENSPCIG00000001546	TRMT6	82	75.650	Phascolarctos_cinereus
ENSCAPG00000015467	TRMT6	93	55.107	ENSPFOG00000003037	trmt6	84	54.976	Poecilia_formosa
ENSCAPG00000015467	TRMT6	93	55.875	ENSPLAG00000005143	trmt6	84	55.742	Poecilia_latipinna
ENSCAPG00000015467	TRMT6	93	55.635	ENSPMEG00000014875	trmt6	84	55.502	Poecilia_mexicana
ENSCAPG00000015467	TRMT6	93	52.058	ENSPREG00000016227	trmt6	81	52.415	Poecilia_reticulata
ENSCAPG00000015467	TRMT6	93	86.232	ENSPPYG00000010691	TRMT6	83	86.232	Pongo_abelii
ENSCAPG00000015467	TRMT6	93	84.783	ENSPCAG00000012098	TRMT6	83	84.783	Procavia_capensis
ENSCAPG00000015467	TRMT6	93	86.024	ENSPCOG00000020723	TRMT6	83	86.024	Propithecus_coquereli
ENSCAPG00000015467	TRMT6	93	81.356	ENSPVAG00000007539	TRMT6	83	81.356	Pteropus_vampyrus
ENSCAPG00000015467	TRMT6	92	54.902	ENSPNYG00000000918	trmt6	82	54.768	Pundamilia_nyererei
ENSCAPG00000015467	TRMT6	96	58.178	ENSPNAG00000019279	trmt6	85	58.237	Pygocentrus_nattereri
ENSCAPG00000015467	TRMT6	93	84.541	ENSRNOG00000021270	Trmt6	83	84.541	Rattus_norvegicus
ENSCAPG00000015467	TRMT6	93	85.024	ENSRBIG00000031132	TRMT6	83	85.024	Rhinopithecus_bieti
ENSCAPG00000015467	TRMT6	93	86.473	ENSRROG00000045329	TRMT6	83	86.473	Rhinopithecus_roxellana
ENSCAPG00000015467	TRMT6	84	85.255	ENSSBOG00000019803	-	91	85.255	Saimiri_boliviensis_boliviensis
ENSCAPG00000015467	TRMT6	93	86.473	ENSSBOG00000033602	-	83	86.473	Saimiri_boliviensis_boliviensis
ENSCAPG00000015467	TRMT6	95	74.882	ENSSHAG00000010754	TRMT6	83	74.882	Sarcophilus_harrisii
ENSCAPG00000015467	TRMT6	93	61.702	ENSSFOG00015008429	trmt6	83	60.520	Scleropages_formosus
ENSCAPG00000015467	TRMT6	95	57.346	ENSSMAG00000005352	trmt6	85	57.820	Scophthalmus_maximus
ENSCAPG00000015467	TRMT6	93	57.452	ENSSDUG00000008294	trmt6	84	58.273	Seriola_dumerili
ENSCAPG00000015467	TRMT6	93	58.612	ENSSLDG00000002180	trmt6	84	59.427	Seriola_lalandi_dorsalis
ENSCAPG00000015467	TRMT6	93	79.952	ENSSARG00000005487	TRMT6	83	79.952	Sorex_araneus
ENSCAPG00000015467	TRMT6	93	58.354	ENSSPAG00000011628	trmt6	84	58.213	Stegastes_partitus
ENSCAPG00000015467	TRMT6	93	86.715	ENSSSCG00000007046	TRMT6	60	86.715	Sus_scrofa
ENSCAPG00000015467	TRMT6	90	72.388	ENSTGUG00000002195	TRMT6	84	74.209	Taeniopygia_guttata
ENSCAPG00000015467	TRMT6	96	52.914	ENSTRUG00000007153	trmt6	85	53.147	Takifugu_rubripes
ENSCAPG00000015467	TRMT6	93	56.086	ENSTNIG00000010726	TRMT6	84	56.086	Tetraodon_nigroviridis
ENSCAPG00000015467	TRMT6	66	89.677	ENSTBEG00000016317	TRMT6	59	89.677	Tupaia_belangeri
ENSCAPG00000015467	TRMT6	93	87.440	ENSTTRG00000012889	TRMT6	83	87.440	Tursiops_truncatus
ENSCAPG00000015467	TRMT6	93	86.957	ENSUAMG00000008674	TRMT6	83	86.957	Ursus_americanus
ENSCAPG00000015467	TRMT6	93	86.957	ENSUMAG00000004999	TRMT6	83	86.957	Ursus_maritimus
ENSCAPG00000015467	TRMT6	93	87.440	ENSVPAG00000002371	TRMT6	82	87.440	Vicugna_pacos
ENSCAPG00000015467	TRMT6	93	86.957	ENSVVUG00000023370	TRMT6	83	86.957	Vulpes_vulpes
ENSCAPG00000015467	TRMT6	93	63.636	ENSXETG00000004501	trmt6	85	63.636	Xenopus_tropicalis
ENSCAPG00000015467	TRMT6	93	51.090	ENSXCOG00000007761	trmt6	82	50.242	Xiphophorus_couchianus
ENSCAPG00000015467	TRMT6	93	55.072	ENSXMAG00000008592	trmt6	85	54.632	Xiphophorus_maculatus