EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015589 (Gene tree)
Gene ID: -
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 59527 bases
Position: chrAVPZ01000478.1:1151732-1211258
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015483	Npa1	PF11707.8	3.7e-68	1	2
ENSCAPP00000015483	Npa1	PF11707.8	3.7e-68	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019266	URB1-201	6570	-	ENSCAPP00000015483	2189 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015589	URB1	99	79.684	ENSG00000142207	URB1	98	79.622	Homo_sapiens
ENSCAPG00000015589	URB1	95	46.898	ENSAPOG00000020308	urb1	97	47.059	Acanthochromis_polyacanthus
ENSCAPG00000015589	URB1	99	75.349	ENSAMEG00000011998	URB1	98	75.349	Ailuropoda_melanoleuca
ENSCAPG00000015589	URB1	96	43.202	ENSACIG00000003248	urb1	96	43.202	Amphilophus_citrinellus
ENSCAPG00000015589	URB1	99	40.366	ENSAOCG00000010364	urb1	98	40.455	Amphiprion_ocellaris
ENSCAPG00000015589	URB1	96	50.943	ENSAPEG00000010758	urb1	97	50.943	Amphiprion_percula
ENSCAPG00000015589	URB1	99	43.405	ENSATEG00000011790	urb1	96	43.405	Anabas_testudineus
ENSCAPG00000015589	URB1	98	54.812	ENSAPLG00000012791	URB1	100	54.948	Anas_platyrhynchos
ENSCAPG00000015589	URB1	99	51.272	ENSACAG00000002817	URB1	97	51.183	Anolis_carolinensis
ENSCAPG00000015589	URB1	99	79.245	ENSANAG00000024617	URB1	98	79.245	Aotus_nancymaae
ENSCAPG00000015589	URB1	99	43.036	ENSACLG00000024865	urb1	98	43.042	Astatotilapia_calliptera
ENSCAPG00000015589	URB1	99	39.295	ENSAMXG00000012306	urb1	98	39.183	Astyanax_mexicanus
ENSCAPG00000015589	URB1	99	72.646	ENSBTAG00000012412	URB1	98	72.735	Bos_taurus
ENSCAPG00000015589	URB1	99	78.536	ENSCJAG00000009118	URB1	98	78.536	Callithrix_jacchus
ENSCAPG00000015589	URB1	99	75.874	ENSCAFG00000008892	URB1	98	75.874	Canis_familiaris
ENSCAPG00000015589	URB1	99	74.820	ENSCAFG00020025994	-	98	74.820	Canis_lupus_dingo
ENSCAPG00000015589	URB1	99	75.664	ENSCAFG00020025987	-	98	75.664	Canis_lupus_dingo
ENSCAPG00000015589	URB1	99	72.568	ENSCHIG00000015645	URB1	98	72.658	Capra_hircus
ENSCAPG00000015589	URB1	99	78.488	ENSTSYG00000013286	URB1	98	78.488	Carlito_syrichta
ENSCAPG00000015589	URB1	99	96.573	ENSCPOG00000006748	URB1	98	96.573	Cavia_porcellus
ENSCAPG00000015589	URB1	99	79.442	ENSCCAG00000021299	URB1	98	79.442	Cebus_capucinus
ENSCAPG00000015589	URB1	99	79.442	ENSCATG00000042630	URB1	98	79.442	Cercocebus_atys
ENSCAPG00000015589	URB1	99	85.592	ENSCLAG00000005262	URB1	98	85.592	Chinchilla_lanigera
ENSCAPG00000015589	URB1	99	77.833	ENSCSAG00000009584	URB1	98	77.833	Chlorocebus_sabaeus
ENSCAPG00000015589	URB1	99	56.774	ENSCPBG00000006454	URB1	98	56.774	Chrysemys_picta_bellii
ENSCAPG00000015589	URB1	99	79.307	ENSCANG00000031088	URB1	98	79.307	Colobus_angolensis_palliatus
ENSCAPG00000015589	URB1	99	74.201	ENSCGRG00001010616	Urb1	98	74.201	Cricetulus_griseus_chok1gshd
ENSCAPG00000015589	URB1	99	74.109	ENSCGRG00000015840	Urb1	99	74.109	Cricetulus_griseus_crigri
ENSCAPG00000015589	URB1	99	41.310	ENSCSEG00000012616	urb1	98	41.281	Cynoglossus_semilaevis
ENSCAPG00000015589	URB1	91	52.433	ENSCVAG00000009076	urb1	94	52.433	Cyprinodon_variegatus
ENSCAPG00000015589	URB1	99	42.832	ENSDARG00000060308	urb1	98	43.093	Danio_rerio
ENSCAPG00000015589	URB1	84	74.393	ENSDNOG00000015586	URB1	98	74.393	Dasypus_novemcinctus
ENSCAPG00000015589	URB1	99	77.833	ENSDORG00000006735	Urb1	98	77.833	Dipodomys_ordii
ENSCAPG00000015589	URB1	91	75.960	ENSETEG00000009080	URB1	90	75.960	Echinops_telfairi
ENSCAPG00000015589	URB1	99	75.585	ENSEASG00005007711	URB1	98	75.585	Equus_asinus_asinus
ENSCAPG00000015589	URB1	96	83.557	ENSECAG00000013206	URB1	98	83.557	Equus_caballus
ENSCAPG00000015589	URB1	53	83.402	ENSEEUG00000003626	-	52	83.402	Erinaceus_europaeus
ENSCAPG00000015589	URB1	98	44.525	ENSELUG00000020516	urb1	98	43.923	Esox_lucius
ENSCAPG00000015589	URB1	99	75.304	ENSFCAG00000002177	URB1	98	75.349	Felis_catus
ENSCAPG00000015589	URB1	99	49.336	ENSFALG00000004636	URB1	99	49.358	Ficedula_albicollis
ENSCAPG00000015589	URB1	99	83.640	ENSFDAG00000007288	URB1	93	83.640	Fukomys_damarensis
ENSCAPG00000015589	URB1	97	41.233	ENSFHEG00000000202	urb1	99	42.391	Fundulus_heteroclitus
ENSCAPG00000015589	URB1	93	45.075	ENSGMOG00000001838	urb1	93	45.253	Gadus_morhua
ENSCAPG00000015589	URB1	99	54.452	ENSGALG00000015887	URB1	98	54.452	Gallus_gallus
ENSCAPG00000015589	URB1	93	50.505	ENSGAFG00000020694	urb1	96	50.505	Gambusia_affinis
ENSCAPG00000015589	URB1	99	43.631	ENSGACG00000011703	urb1	99	43.631	Gasterosteus_aculeatus
ENSCAPG00000015589	URB1	99	56.373	ENSGAGG00000022544	URB1	98	56.373	Gopherus_agassizii
ENSCAPG00000015589	URB1	99	79.622	ENSGGOG00000000285	URB1	98	79.622	Gorilla_gorilla
ENSCAPG00000015589	URB1	99	43.170	ENSHBUG00000001904	urb1	98	43.176	Haplochromis_burtoni
ENSCAPG00000015589	URB1	99	83.415	ENSHGLG00000004907	URB1	98	83.415	Heterocephalus_glaber_female
ENSCAPG00000015589	URB1	99	84.135	ENSHGLG00100010749	URB1	98	84.135	Heterocephalus_glaber_male
ENSCAPG00000015589	URB1	67	50.870	ENSHCOG00000018683	urb1	94	51.087	Hippocampus_comes
ENSCAPG00000015589	URB1	99	39.832	ENSIPUG00000014721	urb1	98	39.700	Ictalurus_punctatus
ENSCAPG00000015589	URB1	99	79.109	ENSSTOG00000004539	URB1	98	79.109	Ictidomys_tridecemlineatus
ENSCAPG00000015589	URB1	99	45.020	ENSKMAG00000006001	urb1	97	46.347	Kryptolebias_marmoratus
ENSCAPG00000015589	URB1	94	49.332	ENSLBEG00000027208	urb1	97	49.332	Labrus_bergylta
ENSCAPG00000015589	URB1	99	48.120	ENSLACG00000017059	URB1	98	48.120	Latimeria_chalumnae
ENSCAPG00000015589	URB1	99	45.467	ENSLOCG00000009190	urb1	98	45.467	Lepisosteus_oculatus
ENSCAPG00000015589	URB1	99	74.091	ENSLAFG00000010407	URB1	98	74.091	Loxodonta_africana
ENSCAPG00000015589	URB1	99	79.397	ENSMFAG00000034391	URB1	95	79.397	Macaca_fascicularis
ENSCAPG00000015589	URB1	99	79.172	ENSMMUG00000010295	URB1	98	79.172	Macaca_mulatta
ENSCAPG00000015589	URB1	99	78.038	ENSMNEG00000032981	URB1	98	78.038	Macaca_nemestrina
ENSCAPG00000015589	URB1	99	79.577	ENSMLEG00000041435	URB1	98	79.577	Mandrillus_leucophaeus
ENSCAPG00000015589	URB1	99	42.608	ENSMAMG00000011238	urb1	97	42.608	Mastacembelus_armatus
ENSCAPG00000015589	URB1	99	41.512	ENSMZEG00005011862	urb1	98	41.474	Maylandia_zebra
ENSCAPG00000015589	URB1	99	54.230	ENSMGAG00000014512	URB1	99	54.230	Meleagris_gallopavo
ENSCAPG00000015589	URB1	93	74.097	ENSMAUG00000010516	Urb1	98	74.097	Mesocricetus_auratus
ENSCAPG00000015589	URB1	99	78.372	ENSMICG00000016424	URB1	98	78.372	Microcebus_murinus
ENSCAPG00000015589	URB1	99	72.904	ENSMOCG00000012613	Urb1	98	72.904	Microtus_ochrogaster
ENSCAPG00000015589	URB1	99	60.872	ENSMODG00000021076	URB1	98	60.872	Monodelphis_domestica
ENSCAPG00000015589	URB1	96	42.445	ENSMALG00000017411	urb1	95	50.279	Monopterus_albus
ENSCAPG00000015589	URB1	99	73.289	MGP_CAROLIEiJ_G0020948	Urb1	98	73.516	Mus_caroli
ENSCAPG00000015589	URB1	99	73.289	ENSMUSG00000039929	Urb1	98	73.516	Mus_musculus
ENSCAPG00000015589	URB1	99	73.512	MGP_PahariEiJ_G0016653	Urb1	98	73.741	Mus_pahari
ENSCAPG00000015589	URB1	99	73.286	MGP_SPRETEiJ_G0021854	Urb1	97	73.514	Mus_spretus
ENSCAPG00000015589	URB1	99	75.079	ENSMPUG00000001123	URB1	98	75.079	Mustela_putorius_furo
ENSCAPG00000015589	URB1	99	75.113	ENSNGAG00000001905	Urb1	98	75.113	Nannospalax_galili
ENSCAPG00000015589	URB1	81	43.826	ENSNBRG00000001049	urb1	97	43.795	Neolamprologus_brichardi
ENSCAPG00000015589	URB1	99	77.833	ENSNLEG00000026872	URB1	98	77.778	Nomascus_leucogenys
ENSCAPG00000015589	URB1	93	66.667	ENSMEUG00000010828	URB1	94	56.077	Notamacropus_eugenii
ENSCAPG00000015589	URB1	99	69.964	ENSOPRG00000013482	URB1	98	69.964	Ochotona_princeps
ENSCAPG00000015589	URB1	99	83.798	ENSODEG00000002587	URB1	98	83.798	Octodon_degus
ENSCAPG00000015589	URB1	99	43.476	ENSONIG00000005599	urb1	98	43.476	Oreochromis_niloticus
ENSCAPG00000015589	URB1	99	76.659	ENSOCUG00000009381	URB1	97	76.659	Oryctolagus_cuniculus
ENSCAPG00000015589	URB1	99	43.131	ENSORLG00000003429	urb1	98	43.131	Oryzias_latipes
ENSCAPG00000015589	URB1	99	43.093	ENSORLG00020013785	urb1	99	42.467	Oryzias_latipes_hni
ENSCAPG00000015589	URB1	99	41.562	ENSORLG00015019421	urb1	96	45.952	Oryzias_latipes_hsok
ENSCAPG00000015589	URB1	78	48.288	ENSOMEG00000002094	urb1	97	48.288	Oryzias_melastigma
ENSCAPG00000015589	URB1	99	78.308	ENSOGAG00000017140	URB1	98	78.308	Otolemur_garnettii
ENSCAPG00000015589	URB1	96	71.441	ENSOARG00000013679	URB1	98	71.441	Ovis_aries
ENSCAPG00000015589	URB1	99	79.982	ENSPPAG00000003423	URB1	98	79.982	Pan_paniscus
ENSCAPG00000015589	URB1	99	75.709	ENSPPRG00000023131	URB1	98	75.709	Panthera_pardus
ENSCAPG00000015589	URB1	91	75.339	ENSPTIG00000016125	URB1	97	75.339	Panthera_tigris_altaica
ENSCAPG00000015589	URB1	99	79.847	ENSPTRG00000013852	URB1	98	79.847	Pan_troglodytes
ENSCAPG00000015589	URB1	99	79.622	ENSPANG00000021964	URB1	98	79.622	Papio_anubis
ENSCAPG00000015589	URB1	99	45.398	ENSPKIG00000003683	urb1	97	45.487	Paramormyrops_kingsleyae
ENSCAPG00000015589	URB1	99	74.166	ENSPEMG00000021205	Urb1	97	74.166	Peromyscus_maniculatus_bairdii
ENSCAPG00000015589	URB1	80	32.417	ENSPMAG00000009733	URB1	99	32.735	Petromyzon_marinus
ENSCAPG00000015589	URB1	99	60.422	ENSPCIG00000016350	URB1	98	60.683	Phascolarctos_cinereus
ENSCAPG00000015589	URB1	98	41.610	ENSPLAG00000004371	urb1	100	41.655	Poecilia_latipinna
ENSCAPG00000015589	URB1	99	42.397	ENSPMEG00000006634	urb1	98	42.397	Poecilia_mexicana
ENSCAPG00000015589	URB1	99	42.512	ENSPREG00000013453	urb1	98	42.512	Poecilia_reticulata
ENSCAPG00000015589	URB1	99	79.865	ENSPPYG00000011359	URB1	98	79.802	Pongo_abelii
ENSCAPG00000015589	URB1	99	63.751	ENSPCAG00000007430	URB1	97	63.751	Procavia_capensis
ENSCAPG00000015589	URB1	99	79.028	ENSPCOG00000022695	URB1	98	79.028	Propithecus_coquereli
ENSCAPG00000015589	URB1	99	74.024	ENSPVAG00000000889	URB1	98	74.024	Pteropus_vampyrus
ENSCAPG00000015589	URB1	99	42.011	ENSPNYG00000010589	urb1	98	41.928	Pundamilia_nyererei
ENSCAPG00000015589	URB1	99	39.651	ENSPNAG00000019324	urb1	98	39.795	Pygocentrus_nattereri
ENSCAPG00000015589	URB1	99	73.888	ENSRNOG00000002080	Urb1	98	73.978	Rattus_norvegicus
ENSCAPG00000015589	URB1	99	78.812	ENSRBIG00000033122	URB1	98	78.812	Rhinopithecus_bieti
ENSCAPG00000015589	URB1	99	78.812	ENSRROG00000040237	URB1	98	78.812	Rhinopithecus_roxellana
ENSCAPG00000015589	URB1	99	79.092	ENSSBOG00000027672	URB1	98	79.092	Saimiri_boliviensis_boliviensis
ENSCAPG00000015589	URB1	99	59.982	ENSSHAG00000005140	URB1	99	59.982	Sarcophilus_harrisii
ENSCAPG00000015589	URB1	90	45.730	ENSSFOG00015000339	urb1	96	45.730	Scleropages_formosus
ENSCAPG00000015589	URB1	99	43.054	ENSSMAG00000003782	urb1	98	43.403	Scophthalmus_maximus
ENSCAPG00000015589	URB1	99	44.128	ENSSDUG00000012313	urb1	98	44.128	Seriola_dumerili
ENSCAPG00000015589	URB1	99	44.078	ENSSLDG00000023179	urb1	98	44.078	Seriola_lalandi_dorsalis
ENSCAPG00000015589	URB1	99	53.411	ENSSPUG00000012447	URB1	98	53.551	Sphenodon_punctatus
ENSCAPG00000015589	URB1	99	43.098	ENSSPAG00000006325	urb1	98	43.098	Stegastes_partitus
ENSCAPG00000015589	URB1	99	74.359	ENSSSCG00000032024	URB1	98	74.359	Sus_scrofa
ENSCAPG00000015589	URB1	74	55.230	ENSTGUG00000013442	URB1	100	55.078	Taeniopygia_guttata
ENSCAPG00000015589	URB1	99	43.149	ENSTRUG00000009372	urb1	98	43.054	Takifugu_rubripes
ENSCAPG00000015589	URB1	99	42.369	ENSTNIG00000016277	urb1	99	42.369	Tetraodon_nigroviridis
ENSCAPG00000015589	URB1	80	80.636	ENSTBEG00000010044	URB1	79	80.636	Tupaia_belangeri
ENSCAPG00000015589	URB1	92	72.775	ENSTTRG00000007712	URB1	92	72.880	Tursiops_truncatus
ENSCAPG00000015589	URB1	99	75.484	ENSUAMG00000012231	URB1	98	75.484	Ursus_americanus
ENSCAPG00000015589	URB1	92	76.488	ENSUMAG00000017419	URB1	97	76.538	Ursus_maritimus
ENSCAPG00000015589	URB1	70	95.652	ENSVPAG00000001164	URB1	69	95.652	Vicugna_pacos
ENSCAPG00000015589	URB1	99	75.326	ENSVVUG00000000551	URB1	98	75.326	Vulpes_vulpes
ENSCAPG00000015589	URB1	99	48.653	ENSXETG00000009895	urb1	99	48.785	Xenopus_tropicalis
ENSCAPG00000015589	URB1	99	40.386	ENSXCOG00000005500	urb1	96	44.934	Xiphophorus_couchianus
ENSCAPG00000015589	URB1	99	40.513	ENSXMAG00000007253	urb1	96	45.011	Xiphophorus_maculatus