EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015782 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 13108 bases
Position: chrAVPZ01000056.1:15230373-15243480
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015718	MBD	PF01429.19	7.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019502	MBD1-201	1608	-	ENSCAPP00000015718	535 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015782	MBD1	96	71.376	ENSG00000141644	MBD1	82	97.222	Homo_sapiens
ENSCAPG00000015782	MBD1	96	59.873	ENSAMEG00000000238	MBD1	95	60.350	Ailuropoda_melanoleuca
ENSCAPG00000015782	MBD1	51	37.124	ENSACAG00000006091	-	72	37.124	Anolis_carolinensis
ENSCAPG00000015782	MBD1	96	71.985	ENSANAG00000036253	MBD1	99	64.809	Aotus_nancymaae
ENSCAPG00000015782	MBD1	96	67.790	ENSBTAG00000003801	MBD1	99	62.292	Bos_taurus
ENSCAPG00000015782	MBD1	96	66.972	ENSCJAG00000004959	MBD1	95	67.278	Callithrix_jacchus
ENSCAPG00000015782	MBD1	98	69.434	ENSCAFG00000018928	MBD1	95	60.800	Canis_familiaris
ENSCAPG00000015782	MBD1	100	61.491	ENSCAFG00020024272	MBD1	100	62.112	Canis_lupus_dingo
ENSCAPG00000015782	MBD1	96	64.350	ENSCHIG00000021134	MBD1	98	64.653	Capra_hircus
ENSCAPG00000015782	MBD1	98	65.138	ENSTSYG00000000509	MBD1	99	66.608	Carlito_syrichta
ENSCAPG00000015782	MBD1	100	70.898	ENSCPOG00000001671	MBD1	96	71.053	Cavia_porcellus
ENSCAPG00000015782	MBD1	96	67.196	ENSCCAG00000034600	MBD1	99	67.549	Cebus_capucinus
ENSCAPG00000015782	MBD1	96	68.421	ENSCATG00000029959	MBD1	99	69.258	Cercocebus_atys
ENSCAPG00000015782	MBD1	96	71.519	ENSCLAG00000007457	MBD1	87	71.746	Chinchilla_lanigera
ENSCAPG00000015782	MBD1	96	64.955	ENSCSAG00000018070	MBD1	98	64.955	Chlorocebus_sabaeus
ENSCAPG00000015782	MBD1	96	71.193	ENSCANG00000033425	MBD1	99	72.089	Colobus_angolensis_palliatus
ENSCAPG00000015782	MBD1	100	58.414	ENSCGRG00001014843	Mbd1	100	58.414	Cricetulus_griseus_chok1gshd
ENSCAPG00000015782	MBD1	100	55.155	ENSCGRG00000014135	Mbd1	100	60.250	Cricetulus_griseus_crigri
ENSCAPG00000015782	MBD1	100	67.681	ENSDNOG00000015998	MBD1	100	59.128	Dasypus_novemcinctus
ENSCAPG00000015782	MBD1	100	69.014	ENSDORG00000013917	Mbd1	100	69.519	Dipodomys_ordii
ENSCAPG00000015782	MBD1	98	68.649	ENSEASG00005003857	MBD1	92	69.730	Equus_asinus_asinus
ENSCAPG00000015782	MBD1	79	83.178	ENSECAG00000011497	MBD1	56	83.178	Equus_caballus
ENSCAPG00000015782	MBD1	100	61.669	ENSFCAG00000015730	MBD1	99	65.734	Felis_catus
ENSCAPG00000015782	MBD1	98	75.758	ENSFDAG00000011085	MBD1	97	75.177	Fukomys_damarensis
ENSCAPG00000015782	MBD1	71	35.476	ENSGAGG00000008206	-	74	35.529	Gopherus_agassizii
ENSCAPG00000015782	MBD1	96	71.193	ENSGGOG00000016966	MBD1	99	72.089	Gorilla_gorilla
ENSCAPG00000015782	MBD1	96	69.333	ENSHGLG00000008740	MBD1	98	69.833	Heterocephalus_glaber_female
ENSCAPG00000015782	MBD1	96	73.462	ENSHGLG00100005198	MBD1	98	73.989	Heterocephalus_glaber_male
ENSCAPG00000015782	MBD1	100	62.957	ENSSTOG00000007780	MBD1	100	63.116	Ictidomys_tridecemlineatus
ENSCAPG00000015782	MBD1	100	69.965	ENSJJAG00000022859	Mbd1	100	69.965	Jaculus_jaculus
ENSCAPG00000015782	MBD1	100	62.379	ENSLAFG00000031328	MBD1	100	63.864	Loxodonta_africana
ENSCAPG00000015782	MBD1	96	68.421	ENSMFAG00000026335	MBD1	99	69.258	Macaca_fascicularis
ENSCAPG00000015782	MBD1	98	64.738	ENSMMUG00000009050	MBD1	95	64.955	Macaca_mulatta
ENSCAPG00000015782	MBD1	96	68.421	ENSMNEG00000038822	MBD1	99	69.258	Macaca_nemestrina
ENSCAPG00000015782	MBD1	96	68.421	ENSMLEG00000043121	MBD1	99	69.258	Mandrillus_leucophaeus
ENSCAPG00000015782	MBD1	96	69.189	ENSMICG00000006414	MBD1	99	71.351	Microcebus_murinus
ENSCAPG00000015782	MBD1	100	58.108	ENSMUSG00000024561	Mbd1	100	58.404	Mus_musculus
ENSCAPG00000015782	MBD1	100	58.020	MGP_PahariEiJ_G0019128	Mbd1	100	60.206	Mus_pahari
ENSCAPG00000015782	MBD1	100	55.663	MGP_SPRETEiJ_G0023304	Mbd1	100	56.311	Mus_spretus
ENSCAPG00000015782	MBD1	96	59.618	ENSMPUG00000008843	MBD1	95	59.936	Mustela_putorius_furo
ENSCAPG00000015782	MBD1	96	60.227	ENSMLUG00000008286	MBD1	95	59.646	Myotis_lucifugus
ENSCAPG00000015782	MBD1	100	66.025	ENSNGAG00000011412	Mbd1	100	66.724	Nannospalax_galili
ENSCAPG00000015782	MBD1	96	71.009	ENSNLEG00000011661	-	99	71.904	Nomascus_leucogenys
ENSCAPG00000015782	MBD1	96	64.695	ENSNLEG00000032711	-	89	64.695	Nomascus_leucogenys
ENSCAPG00000015782	MBD1	96	51.852	ENSOPRG00000007647	MBD1	99	51.852	Ochotona_princeps
ENSCAPG00000015782	MBD1	100	84.286	ENSODEG00000018451	MBD1	100	84.286	Octodon_degus
ENSCAPG00000015782	MBD1	96	58.147	ENSOCUG00000006554	MBD1	98	62.342	Oryctolagus_cuniculus
ENSCAPG00000015782	MBD1	96	60.285	ENSOGAG00000003784	MBD1	95	58.070	Otolemur_garnettii
ENSCAPG00000015782	MBD1	96	75.463	ENSOARG00000004218	MBD1	94	59.395	Ovis_aries
ENSCAPG00000015782	MBD1	96	68.421	ENSPPAG00000038886	MBD1	99	69.258	Pan_paniscus
ENSCAPG00000015782	MBD1	96	65.559	ENSPPRG00000021387	MBD1	99	65.909	Panthera_pardus
ENSCAPG00000015782	MBD1	96	65.734	ENSPTIG00000021231	MBD1	99	66.084	Panthera_tigris_altaica
ENSCAPG00000015782	MBD1	96	68.421	ENSPTRG00000010021	MBD1	99	69.258	Pan_troglodytes
ENSCAPG00000015782	MBD1	98	70.780	ENSPANG00000010867	MBD1	91	71.664	Papio_anubis
ENSCAPG00000015782	MBD1	100	65.026	ENSPEMG00000022630	Mbd1	100	65.554	Peromyscus_maniculatus_bairdii
ENSCAPG00000015782	MBD1	83	51.373	ENSPCIG00000027937	-	69	51.373	Phascolarctos_cinereus
ENSCAPG00000015782	MBD1	96	65.257	ENSPPYG00000009158	MBD1	89	65.257	Pongo_abelii
ENSCAPG00000015782	MBD1	96	55.184	ENSPCAG00000001648	MBD1	99	55.184	Procavia_capensis
ENSCAPG00000015782	MBD1	96	72.711	ENSPCOG00000012450	MBD1	99	73.616	Propithecus_coquereli
ENSCAPG00000015782	MBD1	100	52.500	ENSRNOG00000024104	Mbd1	100	54.466	Rattus_norvegicus
ENSCAPG00000015782	MBD1	96	62.590	ENSRBIG00000041294	MBD1	98	63.538	Rhinopithecus_bieti
ENSCAPG00000015782	MBD1	96	71.009	ENSRROG00000032517	MBD1	99	71.904	Rhinopithecus_roxellana
ENSCAPG00000015782	MBD1	96	69.081	ENSSBOG00000027169	MBD1	99	69.081	Saimiri_boliviensis_boliviensis
ENSCAPG00000015782	MBD1	71	36.580	ENSSHAG00000003661	-	100	39.024	Sarcophilus_harrisii
ENSCAPG00000015782	MBD1	100	70.000	ENSSSCG00000004516	MBD1	100	65.772	Sus_scrofa
ENSCAPG00000015782	MBD1	60	78.802	ENSTBEG00000012651	-	54	78.802	Tupaia_belangeri
ENSCAPG00000015782	MBD1	96	64.458	ENSTTRG00000015523	MBD1	98	64.759	Tursiops_truncatus
ENSCAPG00000015782	MBD1	100	68.165	ENSUAMG00000004752	MBD1	99	63.621	Ursus_americanus
ENSCAPG00000015782	MBD1	100	68.165	ENSUMAG00000002947	MBD1	99	63.018	Ursus_maritimus