EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 59055 bases
Position: chrAVPZ01000222.1:23771572-23830626
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015731	Ribonuclease_3	PF00636.26	7.1e-44	1	2
ENSCAPP00000015731	Ribonuclease_3	PF00636.26	7.1e-44	2	2
ENSCAPP00000015731	dsrm	PF00035.26	8.5e-11	1	1
ENSCAPP00000015731	Ribonucleas_3_3	PF14622.6	1.3e-45	1	2
ENSCAPP00000015731	Ribonucleas_3_3	PF14622.6	1.3e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019515	-	1569	-	ENSCAPP00000015731	522 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015787	-	76	93.216	ENSAPOG00000002761	-	67	93.216	Acanthochromis_polyacanthus
ENSCAPG00000015787	-	95	92.650	ENSACIG00000019308	drosha	53	91.128	Amphilophus_citrinellus
ENSCAPG00000015787	-	100	90.018	ENSANAG00000020506	DROSHA	53	90.018	Aotus_nancymaae
ENSCAPG00000015787	-	100	96.118	ENSCAFG00000018939	-	86	96.118	Canis_familiaris
ENSCAPG00000015787	-	100	96.118	ENSCAFG00020017559	DROSHA	76	96.118	Canis_lupus_dingo
ENSCAPG00000015787	-	100	96.118	ENSCCAG00000027283	DROSHA	53	96.118	Cebus_capucinus
ENSCAPG00000015787	-	100	96.303	ENSCATG00000016833	DROSHA	53	93.715	Cercocebus_atys
ENSCAPG00000015787	-	77	64.417	ENSCING00000001525	-	73	64.417	Ciona_intestinalis
ENSCAPG00000015787	-	95	60.271	ENSCSAVG00000010638	-	62	60.271	Ciona_savignyi
ENSCAPG00000015787	-	100	96.303	ENSCANG00000035071	DROSHA	53	93.715	Colobus_angolensis_palliatus
ENSCAPG00000015787	-	97	79.507	ENSEBUG00000005974	-	77	79.507	Eptatretus_burgeri
ENSCAPG00000015787	-	100	96.303	ENSGGOG00000011006	DROSHA	53	93.900	Gorilla_gorilla
ENSCAPG00000015787	-	100	96.303	ENSSTOG00000016323	DROSHA	100	96.303	Ictidomys_tridecemlineatus
ENSCAPG00000015787	-	100	96.118	ENSMMUG00000012193	DROSHA	53	96.118	Macaca_mulatta
ENSCAPG00000015787	-	100	91.867	ENSMAMG00000012613	drosha	54	91.867	Mastacembelus_armatus
ENSCAPG00000015787	-	100	91.225	ENSMICG00000002241	DROSHA	53	91.225	Microcebus_murinus
ENSCAPG00000015787	-	100	83.364	ENSMMOG00000004016	drosha	51	83.364	Mola_mola
ENSCAPG00000015787	-	100	95.933	MGP_CAROLIEiJ_G0019687	Drosha	53	95.933	Mus_caroli
ENSCAPG00000015787	-	100	95.933	MGP_PahariEiJ_G0016063	Drosha	53	95.933	Mus_pahari
ENSCAPG00000015787	-	100	95.933	MGP_SPRETEiJ_G0020580	Drosha	53	95.933	Mus_spretus
ENSCAPG00000015787	-	95	81.853	ENSNBRG00000001870	drosha	55	80.812	Neolamprologus_brichardi
ENSCAPG00000015787	-	100	96.118	ENSNLEG00000013963	DROSHA	53	93.530	Nomascus_leucogenys
ENSCAPG00000015787	-	100	78.832	ENSOANG00000015744	-	70	78.832	Ornithorhynchus_anatinus
ENSCAPG00000015787	-	100	88.355	ENSORLG00020002854	drosha	52	88.355	Oryzias_latipes_hni
ENSCAPG00000015787	-	100	90.758	ENSORLG00015003156	drosha	53	90.758	Oryzias_latipes_hsok
ENSCAPG00000015787	-	100	96.303	ENSPPAG00000037526	DROSHA	53	91.312	Pan_paniscus
ENSCAPG00000015787	-	79	89.535	ENSPMGG00000016027	drosha	88	89.535	Periophthalmus_magnuspinnatus
ENSCAPG00000015787	-	100	93.346	ENSPCOG00000028511	DROSHA	53	93.346	Propithecus_coquereli
ENSCAPG00000015787	-	95	92.263	ENSPNYG00000000398	drosha	53	88.073	Pundamilia_nyererei
ENSCAPG00000015787	-	100	95.756	ENSRBIG00000032786	DROSHA	53	91.312	Rhinopithecus_bieti
ENSCAPG00000015787	-	100	96.118	ENSSBOG00000024008	DROSHA	53	92.976	Saimiri_boliviensis_boliviensis
ENSCAPG00000015787	-	99	95.009	ENSSHAG00000015198	DROSHA	52	95.009	Sarcophilus_harrisii
ENSCAPG00000015787	-	100	91.682	ENSSDUG00000010944	drosha	53	91.682	Seriola_dumerili
ENSCAPG00000015787	-	100	91.497	ENSSLDG00000025271	drosha	53	91.497	Seriola_lalandi_dorsalis
ENSCAPG00000015787	-	100	90.275	ENSTNIG00000008688	drosha	53	90.275	Tetraodon_nigroviridis
ENSCAPG00000015787	-	100	95.933	ENSUMAG00000014097	DROSHA	75	95.933	Ursus_maritimus
ENSCAPG00000015787	-	100	96.118	ENSVVUG00000022212	DROSHA	78	96.118	Vulpes_vulpes
ENSCAPG00000015787	-	80	78.842	ENSXCOG00000015325	drosha	96	77.801	Xiphophorus_couchianus