EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015813 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 5669 bases
Position: chrAVPZ01000112.1:59794152-59799820
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015760	R3H	PF01424.22	7.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019545	R3HCC1-201	1239	-	ENSCAPP00000015760	413 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015813	R3HCC1	99	62.181	ENSG00000104679	R3HCC1	81	73.481	Homo_sapiens
ENSCAPG00000015813	R3HCC1	57	43.810	ENSAPOG00000003616	r3hcc1	57	43.810	Acanthochromis_polyacanthus
ENSCAPG00000015813	R3HCC1	100	57.639	ENSAMEG00000002963	R3HCC1	82	57.870	Ailuropoda_melanoleuca
ENSCAPG00000015813	R3HCC1	53	39.216	ENSACIG00000017144	r3hcc1	66	35.593	Amphilophus_citrinellus
ENSCAPG00000015813	R3HCC1	55	41.905	ENSAOCG00000003945	r3hcc1	59	41.905	Amphiprion_ocellaris
ENSCAPG00000015813	R3HCC1	55	41.259	ENSAPEG00000003613	r3hcc1	59	41.259	Amphiprion_percula
ENSCAPG00000015813	R3HCC1	58	37.143	ENSATEG00000023860	r3hcc1	69	37.143	Anabas_testudineus
ENSCAPG00000015813	R3HCC1	98	35.927	ENSACAG00000016627	R3HCC1	86	36.771	Anolis_carolinensis
ENSCAPG00000015813	R3HCC1	100	62.903	ENSANAG00000036169	R3HCC1	85	62.903	Aotus_nancymaae
ENSCAPG00000015813	R3HCC1	99	57.373	ENSBTAG00000025830	R3HCC1	85	57.569	Bos_taurus
ENSCAPG00000015813	R3HCC1	99	61.717	ENSCJAG00000020118	R3HCC1	88	53.828	Callithrix_jacchus
ENSCAPG00000015813	R3HCC1	100	56.250	ENSCAFG00000009210	R3HCC1	85	56.481	Canis_familiaris
ENSCAPG00000015813	R3HCC1	81	54.867	ENSCAFG00020012870	R3HCC1	70	55.752	Canis_lupus_dingo
ENSCAPG00000015813	R3HCC1	99	57.604	ENSCHIG00000009107	R3HCC1	88	57.798	Capra_hircus
ENSCAPG00000015813	R3HCC1	99	62.558	ENSTSYG00000000511	R3HCC1	69	62.558	Carlito_syrichta
ENSCAPG00000015813	R3HCC1	100	95.105	ENSCPOG00000009696	R3HCC1	91	95.105	Cavia_porcellus
ENSCAPG00000015813	R3HCC1	99	63.341	ENSCCAG00000037811	R3HCC1	81	63.109	Cebus_capucinus
ENSCAPG00000015813	R3HCC1	99	62.181	ENSCATG00000032971	R3HCC1	88	55.220	Cercocebus_atys
ENSCAPG00000015813	R3HCC1	100	73.427	ENSCLAG00000015556	R3HCC1	75	73.427	Chinchilla_lanigera
ENSCAPG00000015813	R3HCC1	99	62.181	ENSCSAG00000016250	R3HCC1	81	62.877	Chlorocebus_sabaeus
ENSCAPG00000015813	R3HCC1	99	56.221	ENSCHOG00000000396	R3HCC1	86	56.452	Choloepus_hoffmanni
ENSCAPG00000015813	R3HCC1	99	62.645	ENSCANG00000029441	R3HCC1	81	62.645	Colobus_angolensis_palliatus
ENSCAPG00000015813	R3HCC1	99	52.000	ENSCGRG00001014977	R3hcc1	90	57.110	Cricetulus_griseus_chok1gshd
ENSCAPG00000015813	R3HCC1	99	52.000	ENSCGRG00000004454	R3hcc1	90	57.110	Cricetulus_griseus_crigri
ENSCAPG00000015813	R3HCC1	57	40.559	ENSDARG00000099593	r3hcc1	62	40.559	Danio_rerio
ENSCAPG00000015813	R3HCC1	100	58.565	ENSDNOG00000007168	R3HCC1	82	58.565	Dasypus_novemcinctus
ENSCAPG00000015813	R3HCC1	99	52.830	ENSDORG00000026365	R3hcc1	90	56.364	Dipodomys_ordii
ENSCAPG00000015813	R3HCC1	99	53.425	ENSETEG00000001147	R3HCC1	86	54.884	Echinops_telfairi
ENSCAPG00000015813	R3HCC1	100	59.677	ENSEASG00005018782	R3HCC1	72	59.677	Equus_asinus_asinus
ENSCAPG00000015813	R3HCC1	100	59.677	ENSECAG00000025013	R3HCC1	87	59.908	Equus_caballus
ENSCAPG00000015813	R3HCC1	100	54.042	ENSEEUG00000011918	R3HCC1	87	54.042	Erinaceus_europaeus
ENSCAPG00000015813	R3HCC1	99	33.787	ENSELUG00000023650	r3hcc1	94	33.787	Esox_lucius
ENSCAPG00000015813	R3HCC1	100	59.629	ENSFCAG00000012395	R3HCC1	86	59.629	Felis_catus
ENSCAPG00000015813	R3HCC1	100	69.053	ENSFDAG00000001572	R3HCC1	90	69.053	Fukomys_damarensis
ENSCAPG00000015813	R3HCC1	56	40.909	ENSGAFG00000008747	-	65	40.909	Gambusia_affinis
ENSCAPG00000015813	R3HCC1	55	40.367	ENSGACG00000008447	r3hcc1	57	40.367	Gasterosteus_aculeatus
ENSCAPG00000015813	R3HCC1	99	62.763	ENSGGOG00000013817	R3HCC1	89	62.529	Gorilla_gorilla
ENSCAPG00000015813	R3HCC1	100	68.531	ENSHGLG00000010517	R3HCC1	83	68.531	Heterocephalus_glaber_female
ENSCAPG00000015813	R3HCC1	100	68.531	ENSHGLG00100006388	R3HCC1	83	68.531	Heterocephalus_glaber_male
ENSCAPG00000015813	R3HCC1	53	36.364	ENSHCOG00000011745	r3hcc1	57	35.507	Hippocampus_comes
ENSCAPG00000015813	R3HCC1	100	51.936	ENSSTOG00000027130	R3HCC1	85	51.936	Ictidomys_tridecemlineatus
ENSCAPG00000015813	R3HCC1	99	55.116	ENSJJAG00000013075	R3hcc1	90	58.974	Jaculus_jaculus
ENSCAPG00000015813	R3HCC1	58	39.167	ENSKMAG00000000286	r3hcc1	62	40.741	Kryptolebias_marmoratus
ENSCAPG00000015813	R3HCC1	98	31.448	ENSLACG00000011894	R3HCC1	88	31.448	Latimeria_chalumnae
ENSCAPG00000015813	R3HCC1	98	32.258	ENSLOCG00000015442	r3hcc1	84	32.258	Lepisosteus_oculatus
ENSCAPG00000015813	R3HCC1	99	62.442	ENSLAFG00000016137	R3HCC1	86	62.989	Loxodonta_africana
ENSCAPG00000015813	R3HCC1	99	62.413	ENSMFAG00000032894	R3HCC1	88	55.452	Macaca_fascicularis
ENSCAPG00000015813	R3HCC1	99	62.413	ENSMMUG00000016655	R3HCC1	88	55.452	Macaca_mulatta
ENSCAPG00000015813	R3HCC1	99	61.949	ENSMNEG00000043283	R3HCC1	88	55.220	Macaca_nemestrina
ENSCAPG00000015813	R3HCC1	99	62.181	ENSMLEG00000030147	R3HCC1	81	62.645	Mandrillus_leucophaeus
ENSCAPG00000015813	R3HCC1	56	37.762	ENSMAMG00000018146	r3hcc1	66	37.762	Mastacembelus_armatus
ENSCAPG00000015813	R3HCC1	98	36.092	ENSMGAG00000001356	R3HCC1	81	36.092	Meleagris_gallopavo
ENSCAPG00000015813	R3HCC1	52	63.303	ENSMAUG00000016096	R3hcc1	90	56.009	Mesocricetus_auratus
ENSCAPG00000015813	R3HCC1	99	62.326	ENSMICG00000011146	R3HCC1	83	62.558	Microcebus_murinus
ENSCAPG00000015813	R3HCC1	99	36.659	ENSMODG00000016809	-	90	35.763	Monodelphis_domestica
ENSCAPG00000015813	R3HCC1	56	36.111	ENSMALG00000000731	r3hcc1	60	36.111	Monopterus_albus
ENSCAPG00000015813	R3HCC1	52	63.889	MGP_CAROLIEiJ_G0019467	R3hcc1	91	56.152	Mus_caroli
ENSCAPG00000015813	R3HCC1	52	62.963	ENSMUSG00000034194	R3hcc1	90	55.034	Mus_musculus
ENSCAPG00000015813	R3HCC1	99	53.187	MGP_PahariEiJ_G0030484	R3hcc1	90	53.778	Mus_pahari
ENSCAPG00000015813	R3HCC1	52	62.673	MGP_SPRETEiJ_G0020359	R3hcc1	90	54.911	Mus_spretus
ENSCAPG00000015813	R3HCC1	100	57.241	ENSMPUG00000003457	R3HCC1	78	57.471	Mustela_putorius_furo
ENSCAPG00000015813	R3HCC1	100	55.760	ENSMLUG00000000266	R3HCC1	82	56.522	Myotis_lucifugus
ENSCAPG00000015813	R3HCC1	85	71.362	ENSNGAG00000016747	R3hcc1	90	60.880	Nannospalax_galili
ENSCAPG00000015813	R3HCC1	90	60.406	ENSNLEG00000015944	R3HCC1	75	60.358	Nomascus_leucogenys
ENSCAPG00000015813	R3HCC1	99	43.021	ENSMEUG00000010587	R3HCC1	88	43.021	Notamacropus_eugenii
ENSCAPG00000015813	R3HCC1	99	55.814	ENSOPRG00000013390	R3HCC1	85	55.814	Ochotona_princeps
ENSCAPG00000015813	R3HCC1	99	65.652	ENSODEG00000007529	R3HCC1	90	66.022	Octodon_degus
ENSCAPG00000015813	R3HCC1	99	45.012	ENSOANG00000013877	R3HCC1	86	43.807	Ornithorhynchus_anatinus
ENSCAPG00000015813	R3HCC1	99	55.556	ENSOCUG00000023554	R3HCC1	76	55.556	Oryctolagus_cuniculus
ENSCAPG00000015813	R3HCC1	63	38.298	ENSORLG00000016816	r3hcc1	92	30.698	Oryzias_latipes
ENSCAPG00000015813	R3HCC1	63	38.298	ENSORLG00020012005	r3hcc1	92	30.660	Oryzias_latipes_hni
ENSCAPG00000015813	R3HCC1	63	39.007	ENSORLG00015007018	r3hcc1	74	39.007	Oryzias_latipes_hsok
ENSCAPG00000015813	R3HCC1	99	30.345	ENSOMEG00000000816	r3hcc1	92	30.679	Oryzias_melastigma
ENSCAPG00000015813	R3HCC1	99	59.674	ENSOGAG00000001291	R3HCC1	82	59.441	Otolemur_garnettii
ENSCAPG00000015813	R3HCC1	99	57.968	ENSOARG00000010146	R3HCC1	86	58.161	Ovis_aries
ENSCAPG00000015813	R3HCC1	99	62.413	ENSPPAG00000033165	R3HCC1	89	62.181	Pan_paniscus
ENSCAPG00000015813	R3HCC1	99	59.579	ENSPPRG00000002522	R3HCC1	89	59.579	Panthera_pardus
ENSCAPG00000015813	R3HCC1	99	59.813	ENSPTIG00000011230	R3HCC1	93	60.047	Panthera_tigris_altaica
ENSCAPG00000015813	R3HCC1	99	62.877	ENSPTRG00000020076	R3HCC1	88	57.309	Pan_troglodytes
ENSCAPG00000015813	R3HCC1	99	62.181	ENSPANG00000000453	R3HCC1	81	62.877	Papio_anubis
ENSCAPG00000015813	R3HCC1	97	31.840	ENSPKIG00000020397	-	93	31.840	Paramormyrops_kingsleyae
ENSCAPG00000015813	R3HCC1	77	43.662	ENSPKIG00000014426	-	92	43.662	Paramormyrops_kingsleyae
ENSCAPG00000015813	R3HCC1	98	39.052	ENSPSIG00000017664	R3HCC1	87	38.636	Pelodiscus_sinensis
ENSCAPG00000015813	R3HCC1	100	55.286	ENSPEMG00000007118	R3hcc1	90	56.854	Peromyscus_maniculatus_bairdii
ENSCAPG00000015813	R3HCC1	99	40.046	ENSPCIG00000022718	-	82	40.275	Phascolarctos_cinereus
ENSCAPG00000015813	R3HCC1	56	41.121	ENSPFOG00000022301	r3hcc1	54	41.121	Poecilia_formosa
ENSCAPG00000015813	R3HCC1	56	40.541	ENSPLAG00000010794	r3hcc1	54	40.541	Poecilia_latipinna
ENSCAPG00000015813	R3HCC1	56	41.121	ENSPMEG00000022515	r3hcc1	54	41.121	Poecilia_mexicana
ENSCAPG00000015813	R3HCC1	99	63.573	ENSPPYG00000018436	R3HCC1	96	63.573	Pongo_abelii
ENSCAPG00000015813	R3HCC1	64	72.932	ENSPCAG00000012229	R3HCC1	61	72.932	Procavia_capensis
ENSCAPG00000015813	R3HCC1	99	60.606	ENSPCOG00000027554	R3HCC1	89	60.839	Propithecus_coquereli
ENSCAPG00000015813	R3HCC1	99	57.275	ENSPVAG00000009829	R3HCC1	86	57.506	Pteropus_vampyrus
ENSCAPG00000015813	R3HCC1	54	43.307	ENSPNAG00000023875	r3hcc1	61	43.307	Pygocentrus_nattereri
ENSCAPG00000015813	R3HCC1	100	53.898	ENSRNOG00000016777	AABR07018321.1	74	56.125	Rattus_norvegicus
ENSCAPG00000015813	R3HCC1	99	63.573	ENSRBIG00000028045	R3HCC1	89	63.341	Rhinopithecus_bieti
ENSCAPG00000015813	R3HCC1	99	63.341	ENSRROG00000031126	R3HCC1	88	56.148	Rhinopithecus_roxellana
ENSCAPG00000015813	R3HCC1	99	62.413	ENSSBOG00000022590	R3HCC1	89	62.413	Saimiri_boliviensis_boliviensis
ENSCAPG00000015813	R3HCC1	99	33.708	ENSSHAG00000016526	-	89	38.758	Sarcophilus_harrisii
ENSCAPG00000015813	R3HCC1	71	58.333	ENSSFOG00015013507	r3hcc1	79	58.333	Scleropages_formosus
ENSCAPG00000015813	R3HCC1	55	41.259	ENSSPAG00000013497	r3hcc1	59	41.259	Stegastes_partitus
ENSCAPG00000015813	R3HCC1	98	50.345	ENSSSCG00000037347	-	82	50.808	Sus_scrofa
ENSCAPG00000015813	R3HCC1	99	56.845	ENSSSCG00000039915	-	89	57.407	Sus_scrofa
ENSCAPG00000015813	R3HCC1	56	35.294	ENSTRUG00000015880	r3hcc1	64	35.294	Takifugu_rubripes
ENSCAPG00000015813	R3HCC1	99	52.436	ENSTTRG00000012247	R3HCC1	86	52.436	Tursiops_truncatus
ENSCAPG00000015813	R3HCC1	100	56.944	ENSUAMG00000007344	R3HCC1	89	57.639	Ursus_americanus
ENSCAPG00000015813	R3HCC1	100	56.481	ENSVVUG00000005056	R3HCC1	85	56.481	Vulpes_vulpes
ENSCAPG00000015813	R3HCC1	56	40.000	ENSXMAG00000018375	r3hcc1	60	40.000	Xiphophorus_maculatus