EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000015862 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 8010 bases
Position: chrAVPZ01000667.1:29114403-29122412
Accession: 4662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015837	zf-C2H2	PF00096.26	2.1e-35	1	5
ENSCAPP00000015837	zf-C2H2	PF00096.26	2.1e-35	2	5
ENSCAPP00000015837	zf-C2H2	PF00096.26	2.1e-35	3	5
ENSCAPP00000015837	zf-C2H2	PF00096.26	2.1e-35	4	5
ENSCAPP00000015837	zf-C2H2	PF00096.26	2.1e-35	5	5
ENSCAPP00000015834	zf-C2H2	PF00096.26	8.3e-35	1	5
ENSCAPP00000015834	zf-C2H2	PF00096.26	8.3e-35	2	5
ENSCAPP00000015834	zf-C2H2	PF00096.26	8.3e-35	3	5
ENSCAPP00000015834	zf-C2H2	PF00096.26	8.3e-35	4	5
ENSCAPP00000015834	zf-C2H2	PF00096.26	8.3e-35	5	5
ENSCAPP00000015837	zf-met	PF12874.7	9.9e-08	1	1
ENSCAPP00000015834	zf-met	PF12874.7	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019622	GTF3A-202	777	-	ENSCAPP00000015837	258 (aa)	-	-
ENSCAPT00000019619	GTF3A-201	888	-	ENSCAPP00000015834	296 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000015862	GTF3A	90	38.393	ENSCAPG00000002667	-	74	34.320
ENSCAPG00000015862	GTF3A	90	35.673	ENSCAPG00000006920	-	87	34.043
ENSCAPG00000015862	GTF3A	89	41.026	ENSCAPG00000009816	ZNF236	52	41.026
ENSCAPG00000015862	GTF3A	88	32.995	ENSCAPG00000012228	ZBTB48	55	32.627
ENSCAPG00000015862	GTF3A	87	36.792	ENSCAPG00000010404	GFI1B	54	36.792
ENSCAPG00000015862	GTF3A	91	34.731	ENSCAPG00000015217	PRDM5	75	33.113
ENSCAPG00000015862	GTF3A	98	33.047	ENSCAPG00000003129	-	80	41.176
ENSCAPG00000015862	GTF3A	89	33.761	ENSCAPG00000013118	-	71	33.190
ENSCAPG00000015862	GTF3A	90	37.805	ENSCAPG00000016810	ZFP69	72	37.805
ENSCAPG00000015862	GTF3A	90	36.628	ENSCAPG00000017499	ZNF2	66	35.111
ENSCAPG00000015862	GTF3A	88	30.102	ENSCAPG00000000196	ZFP64	52	30.102
ENSCAPG00000015862	GTF3A	95	30.522	ENSCAPG00000009522	ZNF865	60	35.135
ENSCAPG00000015862	GTF3A	93	35.238	ENSCAPG00000000389	ZNF574	61	36.471
ENSCAPG00000015862	GTF3A	83	38.961	ENSCAPG00000013078	SNAI2	60	38.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015862	GTF3A	98	87.069	ENSAMEG00000015824	GTF3A	90	79.655	Ailuropoda_melanoleuca
ENSCAPG00000015862	GTF3A	99	79.297	ENSBTAG00000012600	GTF3A	87	81.022	Bos_taurus
ENSCAPG00000015862	GTF3A	99	80.934	ENSCAFG00000006794	GTF3A	87	79.787	Canis_familiaris
ENSCAPG00000015862	GTF3A	99	79.297	ENSCHIG00000010341	-	86	80.657	Capra_hircus
ENSCAPG00000015862	GTF3A	99	79.297	ENSCHIG00000021040	-	74	80.505	Capra_hircus
ENSCAPG00000015862	GTF3A	98	84.914	ENSTSYG00000004206	GTF3A	92	82.182	Carlito_syrichta
ENSCAPG00000015862	GTF3A	100	99.225	ENSCPOG00000010143	GTF3A	89	99.225	Cavia_porcellus
ENSCAPG00000015862	GTF3A	98	88.095	ENSCLAG00000003912	GTF3A	88	88.095	Chinchilla_lanigera
ENSCAPG00000015862	GTF3A	90	82.403	ENSDNOG00000037405	-	63	81.648	Dasypus_novemcinctus
ENSCAPG00000015862	GTF3A	98	76.650	ENSETEG00000003225	GTF3A	59	76.000	Echinops_telfairi
ENSCAPG00000015862	GTF3A	98	86.638	ENSEASG00005022495	-	69	83.942	Equus_asinus_asinus
ENSCAPG00000015862	GTF3A	99	73.541	ENSEASG00005013216	-	81	76.357	Equus_asinus_asinus
ENSCAPG00000015862	GTF3A	94	81.893	ENSECAG00000024825	-	71	79.197	Equus_caballus
ENSCAPG00000015862	GTF3A	98	87.069	ENSECAG00000014803	GTF3A	80	84.307	Equus_caballus
ENSCAPG00000015862	GTF3A	90	84.848	ENSEEUG00000004307	GTF3A	78	79.433	Erinaceus_europaeus
ENSCAPG00000015862	GTF3A	98	87.083	ENSFCAG00000006982	GTF3A	75	80.000	Felis_catus
ENSCAPG00000015862	GTF3A	99	87.500	ENSFDAG00000016841	GTF3A	89	87.500	Fukomys_damarensis
ENSCAPG00000015862	GTF3A	96	89.960	ENSHGLG00000004173	GTF3A	89	89.960	Heterocephalus_glaber_female
ENSCAPG00000015862	GTF3A	96	89.960	ENSHGLG00100011561	GTF3A	89	89.960	Heterocephalus_glaber_male
ENSCAPG00000015862	GTF3A	98	89.627	ENSSTOG00000013853	GTF3A	90	89.627	Ictidomys_tridecemlineatus
ENSCAPG00000015862	GTF3A	98	78.764	ENSJJAG00000011501	Gtf3a	97	77.600	Jaculus_jaculus
ENSCAPG00000015862	GTF3A	98	71.591	ENSLAFG00000027315	GTF3A	85	73.477	Loxodonta_africana
ENSCAPG00000015862	GTF3A	98	78.378	ENSMAUG00000016253	Gtf3a	88	78.378	Mesocricetus_auratus
ENSCAPG00000015862	GTF3A	98	83.621	ENSMICG00000014763	GTF3A	88	81.919	Microcebus_murinus
ENSCAPG00000015862	GTF3A	97	82.869	MGP_CAROLIEiJ_G0028031	Gtf3a	81	77.627	Mus_caroli
ENSCAPG00000015862	GTF3A	97	82.470	ENSMUSG00000016503	Gtf3a	80	79.923	Mus_musculus
ENSCAPG00000015862	GTF3A	99	81.176	MGP_PahariEiJ_G0024597	Gtf3a	85	81.176	Mus_pahari
ENSCAPG00000015862	GTF3A	97	82.470	MGP_SPRETEiJ_G0029029	Gtf3a	84	82.470	Mus_spretus
ENSCAPG00000015862	GTF3A	98	87.500	ENSMPUG00000005835	GTF3A	80	83.012	Mustela_putorius_furo
ENSCAPG00000015862	GTF3A	99	82.946	ENSMLUG00000002158	GTF3A	90	85.878	Myotis_lucifugus
ENSCAPG00000015862	GTF3A	98	87.931	ENSNLEG00000000331	GTF3A	89	81.379	Nomascus_leucogenys
ENSCAPG00000015862	GTF3A	100	51.361	ENSMEUG00000010089	GTF3A	86	55.479	Notamacropus_eugenii
ENSCAPG00000015862	GTF3A	99	81.938	ENSOPRG00000000854	-	63	81.102	Ochotona_princeps
ENSCAPG00000015862	GTF3A	99	86.381	ENSODEG00000006725	GTF3A	75	86.525	Octodon_degus
ENSCAPG00000015862	GTF3A	99	81.641	ENSOCUG00000011713	GTF3A	71	82.418	Oryctolagus_cuniculus
ENSCAPG00000015862	GTF3A	98	86.638	ENSOGAG00000014589	GTF3A	81	81.853	Otolemur_garnettii
ENSCAPG00000015862	GTF3A	99	72.266	ENSOARG00000012551	GTF3A	85	74.453	Ovis_aries
ENSCAPG00000015862	GTF3A	98	83.012	ENSPPRG00000002368	GTF3A	90	80.690	Panthera_pardus
ENSCAPG00000015862	GTF3A	98	82.625	ENSPTIG00000018958	GTF3A	79	80.345	Panthera_tigris_altaica
ENSCAPG00000015862	GTF3A	98	50.655	ENSPSIG00000011722	GTF3A	84	55.652	Pelodiscus_sinensis
ENSCAPG00000015862	GTF3A	98	87.500	ENSPPYG00000005235	GTF3A	91	81.034	Pongo_abelii
ENSCAPG00000015862	GTF3A	98	84.549	ENSPCOG00000016742	GTF3A	74	77.663	Propithecus_coquereli
ENSCAPG00000015862	GTF3A	98	79.845	ENSPVAG00000012837	GTF3A	70	83.142	Pteropus_vampyrus
ENSCAPG00000015862	GTF3A	93	77.372	ENSRROG00000043264	GTF3A	79	74.903	Rhinopithecus_roxellana
ENSCAPG00000015862	GTF3A	100	77.567	ENSSHAG00000016965	GTF3A	85	82.375	Sarcophilus_harrisii
ENSCAPG00000015862	GTF3A	93	85.714	ENSSARG00000010692	GTF3A	74	69.888	Sorex_araneus
ENSCAPG00000015862	GTF3A	93	73.444	ENSSPUG00000005307	GTF3A	79	73.563	Sphenodon_punctatus
ENSCAPG00000015862	GTF3A	89	45.887	ENSTRUG00000005241	gtf3ab	88	46.341	Takifugu_rubripes
ENSCAPG00000015862	GTF3A	93	86.667	ENSTBEG00000012075	GTF3A	60	86.056	Tupaia_belangeri
ENSCAPG00000015862	GTF3A	98	73.745	ENSTTRG00000008538	GTF3A	76	74.552	Tursiops_truncatus
ENSCAPG00000015862	GTF3A	98	79.655	ENSUAMG00000019189	GTF3A	90	79.655	Ursus_americanus
ENSCAPG00000015862	GTF3A	96	85.950	ENSUMAG00000016941	GTF3A	92	85.950	Ursus_maritimus
ENSCAPG00000015862	GTF3A	95	83.571	ENSVPAG00000004995	GTF3A	93	83.571	Vicugna_pacos
ENSCAPG00000015862	GTF3A	99	80.545	ENSVVUG00000009197	GTF3A	90	77.320	Vulpes_vulpes