EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015882 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2741 bases
Position: chrAVPZ01000211.1:2632183-2634923
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015862	APOBEC_N	PF08210.11	3e-30	1	1
ENSCAPP00000015862	APOBEC_C	PF05240.14	3.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019647	-	645	-	ENSCAPP00000015862	215 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015882	-	100	69.302	ENSG00000111701	APOBEC1	91	69.302	Homo_sapiens
ENSCAPG00000015882	-	100	69.302	ENSAMEG00000007098	APOBEC1	91	69.302	Ailuropoda_melanoleuca
ENSCAPG00000015882	-	79	43.103	ENSACAG00000028578	-	93	43.103	Anolis_carolinensis
ENSCAPG00000015882	-	99	67.290	ENSANAG00000027743	APOBEC1	86	67.290	Aotus_nancymaae
ENSCAPG00000015882	-	100	64.186	ENSBTAG00000014683	APOBEC1	91	64.186	Bos_taurus
ENSCAPG00000015882	-	99	68.692	ENSCJAG00000005398	APOBEC1	97	68.692	Callithrix_jacchus
ENSCAPG00000015882	-	100	67.907	ENSCAFG00000013901	APOBEC1	91	67.907	Canis_familiaris
ENSCAPG00000015882	-	99	68.692	ENSCAFG00020003511	APOBEC1	90	68.692	Canis_lupus_dingo
ENSCAPG00000015882	-	100	63.256	ENSCHIG00000011898	APOBEC1	93	60.930	Capra_hircus
ENSCAPG00000015882	-	61	68.182	ENSTSYG00000029141	APOBEC1	94	68.182	Carlito_syrichta
ENSCAPG00000015882	-	100	93.488	ENSCPOG00000033068	APOBEC1	91	93.488	Cavia_porcellus
ENSCAPG00000015882	-	99	68.692	ENSCCAG00000022258	APOBEC1	91	68.692	Cebus_capucinus
ENSCAPG00000015882	-	99	70.093	ENSCATG00000021613	APOBEC1	86	70.093	Cercocebus_atys
ENSCAPG00000015882	-	100	90.698	ENSCLAG00000014645	APOBEC1	93	90.698	Chinchilla_lanigera
ENSCAPG00000015882	-	85	71.585	ENSCSAG00000009817	APOBEC1	96	71.585	Chlorocebus_sabaeus
ENSCAPG00000015882	-	96	38.571	ENSCPBG00000014331	-	84	38.571	Chrysemys_picta_bellii
ENSCAPG00000015882	-	79	48.837	ENSCPBG00000014335	-	70	48.837	Chrysemys_picta_bellii
ENSCAPG00000015882	-	88	45.026	ENSCPBG00000014327	-	71	45.026	Chrysemys_picta_bellii
ENSCAPG00000015882	-	90	44.330	ENSCPBG00000014329	-	53	44.330	Chrysemys_picta_bellii
ENSCAPG00000015882	-	88	45.550	ENSCPBG00000014328	-	83	45.550	Chrysemys_picta_bellii
ENSCAPG00000015882	-	76	46.386	ENSCPBG00000017398	-	73	46.386	Chrysemys_picta_bellii
ENSCAPG00000015882	-	99	69.626	ENSCANG00000038359	APOBEC1	93	69.626	Colobus_angolensis_palliatus
ENSCAPG00000015882	-	99	62.150	ENSCGRG00001011130	Apobec1	93	62.150	Cricetulus_griseus_chok1gshd
ENSCAPG00000015882	-	99	62.150	ENSCGRG00000008644	Apobec1	93	62.150	Cricetulus_griseus_crigri
ENSCAPG00000015882	-	99	66.355	ENSDNOG00000010926	APOBEC1	91	66.355	Dasypus_novemcinctus
ENSCAPG00000015882	-	99	60.280	ENSDORG00000023717	Apobec1	100	60.280	Dipodomys_ordii
ENSCAPG00000015882	-	99	68.372	ENSETEG00000004867	APOBEC1	91	68.372	Echinops_telfairi
ENSCAPG00000015882	-	99	71.028	ENSEASG00005015951	APOBEC1	90	71.028	Equus_asinus_asinus
ENSCAPG00000015882	-	85	71.038	ENSECAG00000017163	APOBEC1	96	71.038	Equus_caballus
ENSCAPG00000015882	-	95	48.529	ENSEEUG00000007530	-	97	48.529	Erinaceus_europaeus
ENSCAPG00000015882	-	95	60.294	ENSEEUG00000009112	-	91	60.294	Erinaceus_europaeus
ENSCAPG00000015882	-	99	69.159	ENSFCAG00000009350	APOBEC1	91	69.159	Felis_catus
ENSCAPG00000015882	-	87	46.154	ENSFALG00000007257	-	80	46.154	Ficedula_albicollis
ENSCAPG00000015882	-	94	71.287	ENSFDAG00000018470	APOBEC1	97	71.287	Fukomys_damarensis
ENSCAPG00000015882	-	79	40.805	ENSGAGG00000021745	-	64	40.805	Gopherus_agassizii
ENSCAPG00000015882	-	94	41.379	ENSGAGG00000021744	-	79	41.379	Gopherus_agassizii
ENSCAPG00000015882	-	94	47.059	ENSGAGG00000011837	-	88	48.521	Gopherus_agassizii
ENSCAPG00000015882	-	79	43.860	ENSGAGG00000006624	-	62	43.860	Gopherus_agassizii
ENSCAPG00000015882	-	74	46.296	ENSGAGG00000004947	-	83	46.617	Gopherus_agassizii
ENSCAPG00000015882	-	100	73.953	ENSHGLG00000001495	APOBEC1	91	73.953	Heterocephalus_glaber_female
ENSCAPG00000015882	-	100	74.419	ENSHGLG00100002187	APOBEC1	91	74.419	Heterocephalus_glaber_male
ENSCAPG00000015882	-	99	52.804	ENSSTOG00000021971	APOBEC1	100	65.306	Ictidomys_tridecemlineatus
ENSCAPG00000015882	-	99	66.355	ENSJJAG00000022108	Apobec1	93	66.355	Jaculus_jaculus
ENSCAPG00000015882	-	99	67.757	ENSLAFG00000030837	APOBEC1	96	67.757	Loxodonta_africana
ENSCAPG00000015882	-	99	70.093	ENSMFAG00000000277	APOBEC1	96	71.038	Macaca_fascicularis
ENSCAPG00000015882	-	99	69.626	ENSMNEG00000029670	APOBEC1	91	69.626	Macaca_nemestrina
ENSCAPG00000015882	-	99	70.093	ENSMLEG00000036301	APOBEC1	91	70.093	Mandrillus_leucophaeus
ENSCAPG00000015882	-	99	62.617	ENSMAUG00000022167	Apobec1	96	62.617	Mesocricetus_auratus
ENSCAPG00000015882	-	100	71.163	ENSMICG00000043645	APOBEC1	93	71.163	Microcebus_murinus
ENSCAPG00000015882	-	99	59.813	ENSMODG00000018004	APOBEC1	91	59.813	Monodelphis_domestica
ENSCAPG00000015882	-	99	63.380	ENSMUSG00000040613	Apobec1	93	63.380	Mus_musculus
ENSCAPG00000015882	-	99	61.972	MGP_PahariEiJ_G0022580	-	93	61.972	Mus_pahari
ENSCAPG00000015882	-	99	63.380	MGP_SPRETEiJ_G0029857	Apobec1	93	63.380	Mus_spretus
ENSCAPG00000015882	-	100	65.581	ENSMPUG00000017532	APOBEC1	91	65.581	Mustela_putorius_furo
ENSCAPG00000015882	-	99	62.150	ENSNGAG00000022607	Apobec1	93	62.150	Nannospalax_galili
ENSCAPG00000015882	-	100	69.302	ENSNLEG00000005342	APOBEC1	91	69.302	Nomascus_leucogenys
ENSCAPG00000015882	-	99	57.477	ENSMEUG00000013406	APOBEC1	91	57.477	Notamacropus_eugenii
ENSCAPG00000015882	-	80	58.140	ENSOPRG00000009508	-	95	58.140	Ochotona_princeps
ENSCAPG00000015882	-	100	67.907	ENSOCUG00000025736	APOBEC1	81	67.907	Oryctolagus_cuniculus
ENSCAPG00000015882	-	99	69.159	ENSOGAG00000026415	APOBEC1	91	69.159	Otolemur_garnettii
ENSCAPG00000015882	-	100	64.186	ENSOARG00000002072	APOBEC1	90	64.186	Ovis_aries
ENSCAPG00000015882	-	100	63.256	ENSPPAG00000027657	APOBEC1	90	63.256	Pan_paniscus
ENSCAPG00000015882	-	99	68.692	ENSPPRG00000012182	APOBEC1	91	68.692	Panthera_pardus
ENSCAPG00000015882	-	99	68.692	ENSPTIG00000020280	APOBEC1	91	68.692	Panthera_tigris_altaica
ENSCAPG00000015882	-	100	69.767	ENSPTRG00000004614	APOBEC1	91	69.767	Pan_troglodytes
ENSCAPG00000015882	-	99	70.093	ENSPANG00000021027	APOBEC1	91	70.093	Papio_anubis
ENSCAPG00000015882	-	79	47.368	ENSPSIG00000012568	-	74	47.368	Pelodiscus_sinensis
ENSCAPG00000015882	-	59	50.909	ENSPSIG00000012791	-	72	50.909	Pelodiscus_sinensis
ENSCAPG00000015882	-	99	62.617	ENSPEMG00000023841	Apobec1	93	62.617	Peromyscus_maniculatus_bairdii
ENSCAPG00000015882	-	99	62.617	ENSPCIG00000023973	APOBEC1	91	62.617	Phascolarctos_cinereus
ENSCAPG00000015882	-	100	67.442	ENSPPYG00000004228	APOBEC1	87	67.442	Pongo_abelii
ENSCAPG00000015882	-	80	68.605	ENSPCAG00000008733	APOBEC1	92	68.605	Procavia_capensis
ENSCAPG00000015882	-	100	70.233	ENSPCOG00000013957	APOBEC1	95	70.233	Propithecus_coquereli
ENSCAPG00000015882	-	100	50.698	ENSPVAG00000010709	APOBEC1	91	50.698	Pteropus_vampyrus
ENSCAPG00000015882	-	99	60.563	ENSRNOG00000015411	Apobec1	93	60.563	Rattus_norvegicus
ENSCAPG00000015882	-	99	68.692	ENSRBIG00000031161	APOBEC1	91	68.692	Rhinopithecus_bieti
ENSCAPG00000015882	-	99	68.692	ENSRROG00000033576	APOBEC1	95	69.613	Rhinopithecus_roxellana
ENSCAPG00000015882	-	80	70.349	ENSSBOG00000030587	APOBEC1	97	70.349	Saimiri_boliviensis_boliviensis
ENSCAPG00000015882	-	99	62.150	ENSSHAG00000008925	APOBEC1	94	62.150	Sarcophilus_harrisii
ENSCAPG00000015882	-	80	61.047	ENSSARG00000000032	-	100	61.047	Sorex_araneus
ENSCAPG00000015882	-	60	66.667	ENSSARG00000011972	-	98	66.667	Sorex_araneus
ENSCAPG00000015882	-	92	41.584	ENSSPUG00000009044	-	77	41.584	Sphenodon_punctatus
ENSCAPG00000015882	-	99	68.692	ENSSSCG00000000668	APOBEC1	91	68.692	Sus_scrofa
ENSCAPG00000015882	-	67	46.528	ENSTGUG00000013118	-	99	46.528	Taeniopygia_guttata
ENSCAPG00000015882	-	99	67.290	ENSTBEG00000010043	APOBEC1	91	67.290	Tupaia_belangeri
ENSCAPG00000015882	-	80	65.116	ENSTTRG00000014015	APOBEC1	92	65.116	Tursiops_truncatus
ENSCAPG00000015882	-	100	68.837	ENSUAMG00000011636	APOBEC1	88	68.837	Ursus_americanus
ENSCAPG00000015882	-	100	68.837	ENSUMAG00000016552	APOBEC1	88	68.837	Ursus_maritimus
ENSCAPG00000015882	-	99	67.757	ENSVPAG00000001343	APOBEC1	91	67.757	Vicugna_pacos
ENSCAPG00000015882	-	100	68.372	ENSVVUG00000010522	APOBEC1	91	68.372	Vulpes_vulpes