EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000015887 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 13398 bases
Position: chrAVPZ01000445.1:44721378-44734775
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015884	eIF-3c_N	PF05470.12	1.4e-263	1	1
ENSCAPP00000015878	eIF-3c_N	PF05470.12	5.4e-261	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019669	-	2496	-	ENSCAPP00000015884	831 (aa)	-	-
ENSCAPT00000019663	-	2517	-	ENSCAPP00000015878	838 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015887	-	100	88.675	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSCAPG00000015887	-	100	87.783	ENSG00000205609	EIF3CL	96	88.122	Homo_sapiens
ENSCAPG00000015887	-	85	84.921	ENSAPOG00000024092	eif3c	88	84.921	Acanthochromis_polyacanthus
ENSCAPG00000015887	-	100	89.241	ENSAMEG00000015454	-	96	89.241	Ailuropoda_melanoleuca
ENSCAPG00000015887	-	99	67.314	ENSACIG00000015082	eif3c	96	66.127	Amphilophus_citrinellus
ENSCAPG00000015887	-	99	69.448	ENSAOCG00000021466	eif3c	95	69.762	Amphiprion_ocellaris
ENSCAPG00000015887	-	99	69.448	ENSAPEG00000010521	eif3c	95	69.762	Amphiprion_percula
ENSCAPG00000015887	-	99	69.379	ENSATEG00000019001	eif3c	95	70.023	Anabas_testudineus
ENSCAPG00000015887	-	100	78.442	ENSACAG00000005937	-	96	78.781	Anolis_carolinensis
ENSCAPG00000015887	-	100	88.562	ENSANAG00000020640	-	96	88.562	Aotus_nancymaae
ENSCAPG00000015887	-	84	84.127	ENSACLG00000009322	eif3c	88	84.127	Astatotilapia_calliptera
ENSCAPG00000015887	-	84	84.921	ENSACLG00000009347	eif3c	86	84.921	Astatotilapia_calliptera
ENSCAPG00000015887	-	99	69.056	ENSAMXG00000020949	eif3c	95	69.570	Astyanax_mexicanus
ENSCAPG00000015887	-	100	87.316	ENSBTAG00000006543	EIF3CL	96	88.562	Bos_taurus
ENSCAPG00000015887	-	99	38.688	WBGene00001226	eif-3.C	93	38.558	Caenorhabditis_elegans
ENSCAPG00000015887	-	100	88.448	ENSCJAG00000006341	-	96	88.448	Callithrix_jacchus
ENSCAPG00000015887	-	100	89.128	ENSCAFG00000017143	-	96	89.128	Canis_familiaris
ENSCAPG00000015887	-	100	89.128	ENSCAFG00020017587	-	96	89.128	Canis_lupus_dingo
ENSCAPG00000015887	-	100	87.203	ENSCHIG00000024795	-	96	88.675	Capra_hircus
ENSCAPG00000015887	-	100	88.448	ENSTSYG00000003486	-	96	88.448	Carlito_syrichta
ENSCAPG00000015887	-	100	90.487	ENSCPOG00000007533	-	96	90.487	Cavia_porcellus
ENSCAPG00000015887	-	99	80.359	ENSCCAG00000029099	-	95	79.167	Cebus_capucinus
ENSCAPG00000015887	-	100	87.429	ENSCCAG00000034928	-	96	87.429	Cebus_capucinus
ENSCAPG00000015887	-	100	84.187	ENSCCAG00000027724	-	96	83.390	Cebus_capucinus
ENSCAPG00000015887	-	100	88.562	ENSCATG00000032673	-	96	88.562	Cercocebus_atys
ENSCAPG00000015887	-	100	89.128	ENSCLAG00000011094	-	96	89.128	Chinchilla_lanigera
ENSCAPG00000015887	-	100	88.562	ENSCSAG00000006297	-	96	88.562	Chlorocebus_sabaeus
ENSCAPG00000015887	-	56	81.467	ENSCHOG00000003120	-	88	81.467	Choloepus_hoffmanni
ENSCAPG00000015887	-	76	79.739	ENSCPBG00000012407	-	94	79.605	Chrysemys_picta_bellii
ENSCAPG00000015887	-	96	43.841	ENSCSAVG00000006744	-	90	57.391	Ciona_savignyi
ENSCAPG00000015887	-	100	88.562	ENSCANG00000033626	-	96	88.562	Colobus_angolensis_palliatus
ENSCAPG00000015887	-	100	88.562	ENSCGRG00001015265	EIF3C	96	88.675	Cricetulus_griseus_chok1gshd
ENSCAPG00000015887	-	99	68.899	ENSCSEG00000017770	eif3c	96	68.558	Cynoglossus_semilaevis
ENSCAPG00000015887	-	99	68.403	ENSCVAG00000005402	eif3c	95	69.161	Cyprinodon_variegatus
ENSCAPG00000015887	-	99	69.222	ENSDARG00000016443	eif3c	95	69.257	Danio_rerio
ENSCAPG00000015887	-	100	88.901	ENSDNOG00000031497	-	96	88.901	Dasypus_novemcinctus
ENSCAPG00000015887	-	100	89.694	ENSDORG00000016471	Eif3c	96	89.694	Dipodomys_ordii
ENSCAPG00000015887	-	69	49.507	FBgn0034258	eIF3c	91	45.602	Drosophila_melanogaster
ENSCAPG00000015887	-	91	92.808	ENSETEG00000013527	-	88	93.151	Echinops_telfairi
ENSCAPG00000015887	-	99	57.078	ENSEBUG00000001629	eif3c	96	57.531	Eptatretus_burgeri
ENSCAPG00000015887	-	100	88.901	ENSECAG00000008746	-	96	88.901	Equus_caballus
ENSCAPG00000015887	-	67	59.689	ENSEEUG00000000726	-	64	59.689	Erinaceus_europaeus
ENSCAPG00000015887	-	90	86.783	ENSEEUG00000006148	-	100	86.908	Erinaceus_europaeus
ENSCAPG00000015887	-	84	85.714	ENSELUG00000022257	eif3c	88	85.714	Esox_lucius
ENSCAPG00000015887	-	100	89.128	ENSFCAG00000015782	-	96	89.128	Felis_catus
ENSCAPG00000015887	-	100	89.354	ENSFDAG00000003588	-	96	89.354	Fukomys_damarensis
ENSCAPG00000015887	-	99	69.300	ENSFHEG00000014154	EIF3C	95	69.639	Fundulus_heteroclitus
ENSCAPG00000015887	-	97	67.678	ENSGMOG00000016885	eif3c	98	67.010	Gadus_morhua
ENSCAPG00000015887	-	96	69.303	ENSGACG00000007652	eif3c	96	68.707	Gasterosteus_aculeatus
ENSCAPG00000015887	-	96	75.793	ENSGAGG00000006666	-	100	75.558	Gopherus_agassizii
ENSCAPG00000015887	-	57	96.911	ENSGGOG00000022677	-	100	96.911	Gorilla_gorilla
ENSCAPG00000015887	-	100	88.448	ENSGGOG00000026919	EIF3C	100	88.448	Gorilla_gorilla
ENSCAPG00000015887	-	100	89.354	ENSHGLG00000011445	EIF3C	96	89.354	Heterocephalus_glaber_female
ENSCAPG00000015887	-	100	89.354	ENSHGLG00100000217	EIF3C	96	89.354	Heterocephalus_glaber_male
ENSCAPG00000015887	-	99	69.300	ENSHCOG00000019694	eif3c	95	69.126	Hippocampus_comes
ENSCAPG00000015887	-	99	68.427	ENSIPUG00000016878	eif3c	95	69.369	Ictalurus_punctatus
ENSCAPG00000015887	-	100	89.241	ENSSTOG00000021278	-	96	89.241	Ictidomys_tridecemlineatus
ENSCAPG00000015887	-	100	88.222	ENSJJAG00000012722	Eif3c	96	88.222	Jaculus_jaculus
ENSCAPG00000015887	-	98	70.011	ENSKMAG00000021662	eif3c	93	69.074	Kryptolebias_marmoratus
ENSCAPG00000015887	-	98	68.621	ENSLBEG00000023370	eif3c	96	68.274	Labrus_bergylta
ENSCAPG00000015887	-	100	71.026	ENSLACG00000000770	eif3c	96	72.891	Latimeria_chalumnae
ENSCAPG00000015887	-	99	88.322	ENSLAFG00000027426	-	96	88.322	Loxodonta_africana
ENSCAPG00000015887	-	100	88.562	ENSMFAG00000041930	-	96	88.562	Macaca_fascicularis
ENSCAPG00000015887	-	100	88.562	ENSMMUG00000011798	-	96	88.562	Macaca_mulatta
ENSCAPG00000015887	-	100	88.562	ENSMNEG00000023915	-	96	88.562	Macaca_nemestrina
ENSCAPG00000015887	-	100	88.562	ENSMLEG00000027529	-	96	88.562	Mandrillus_leucophaeus
ENSCAPG00000015887	-	99	68.931	ENSMAMG00000012512	eif3c	91	80.128	Mastacembelus_armatus
ENSCAPG00000015887	-	99	67.015	ENSMZEG00005013699	eif3c	85	84.921	Maylandia_zebra
ENSCAPG00000015887	-	84	84.127	ENSMZEG00005013685	eif3c	88	84.127	Maylandia_zebra
ENSCAPG00000015887	-	100	88.448	ENSMAUG00000010621	Eif3c	96	88.562	Mesocricetus_auratus
ENSCAPG00000015887	-	100	88.901	ENSMICG00000036748	-	96	88.901	Microcebus_murinus
ENSCAPG00000015887	-	97	88.167	ENSMOCG00000004204	Eif3c	94	88.283	Microtus_ochrogaster
ENSCAPG00000015887	-	99	67.712	ENSMMOG00000001572	eif3c	72	73.267	Mola_mola
ENSCAPG00000015887	-	100	85.973	ENSMODG00000015579	-	96	86.199	Monodelphis_domestica
ENSCAPG00000015887	-	84	83.200	ENSMALG00000008907	eif3c	88	82.677	Monopterus_albus
ENSCAPG00000015887	-	100	88.109	MGP_CAROLIEiJ_G0030451	Eif3c	96	86.750	Mus_caroli
ENSCAPG00000015887	-	100	88.109	ENSMUSG00000030738	Eif3c	96	86.750	Mus_musculus
ENSCAPG00000015887	-	100	87.542	MGP_PahariEiJ_G0013661	Eif3c	96	86.297	Mus_pahari
ENSCAPG00000015887	-	100	88.109	MGP_SPRETEiJ_G0031565	Eif3c	96	86.750	Mus_spretus
ENSCAPG00000015887	-	100	88.788	ENSMPUG00000012732	-	99	88.788	Mustela_putorius_furo
ENSCAPG00000015887	-	100	88.649	ENSMLUG00000015558	-	96	88.649	Myotis_lucifugus
ENSCAPG00000015887	-	100	89.354	ENSNGAG00000007177	-	96	89.354	Nannospalax_galili
ENSCAPG00000015887	-	90	62.003	ENSNGAG00000010901	-	91	63.220	Nannospalax_galili
ENSCAPG00000015887	-	100	77.803	ENSNLEG00000001425	-	96	77.107	Nomascus_leucogenys
ENSCAPG00000015887	-	99	70.548	ENSMEUG00000009939	-	96	70.810	Notamacropus_eugenii
ENSCAPG00000015887	-	97	50.481	ENSMEUG00000005317	-	97	63.433	Notamacropus_eugenii
ENSCAPG00000015887	-	100	88.562	ENSOPRG00000000931	-	96	88.788	Ochotona_princeps
ENSCAPG00000015887	-	100	89.241	ENSODEG00000013508	-	96	89.354	Octodon_degus
ENSCAPG00000015887	-	69	63.300	ENSONIG00000011434	eif3c	99	63.300	Oreochromis_niloticus
ENSCAPG00000015887	-	100	82.294	ENSOANG00000011410	-	96	82.517	Ornithorhynchus_anatinus
ENSCAPG00000015887	-	100	89.354	ENSOCUG00000022489	-	96	89.354	Oryctolagus_cuniculus
ENSCAPG00000015887	-	98	68.512	ENSORLG00000006318	eif3c	95	69.028	Oryzias_latipes
ENSCAPG00000015887	-	98	68.512	ENSORLG00020015713	eif3c	87	76.582	Oryzias_latipes_hni
ENSCAPG00000015887	-	98	68.627	ENSORLG00015013772	eif3c	93	68.197	Oryzias_latipes_hsok
ENSCAPG00000015887	-	99	67.667	ENSOMEG00000020450	eif3c	96	67.333	Oryzias_melastigma
ENSCAPG00000015887	-	100	88.901	ENSOGAG00000012737	-	96	88.901	Otolemur_garnettii
ENSCAPG00000015887	-	100	87.203	ENSOARG00000002892	-	96	88.675	Ovis_aries
ENSCAPG00000015887	-	100	89.128	ENSPPRG00000012336	-	96	89.128	Panthera_pardus
ENSCAPG00000015887	-	100	89.128	ENSPTIG00000011712	-	96	89.128	Panthera_tigris_altaica
ENSCAPG00000015887	-	100	88.562	ENSPANG00000021151	-	96	88.562	Papio_anubis
ENSCAPG00000015887	-	99	69.560	ENSPKIG00000002049	eif3c	95	70.090	Paramormyrops_kingsleyae
ENSCAPG00000015887	-	88	75.290	ENSPMGG00000005409	eif3c	90	75.290	Periophthalmus_magnuspinnatus
ENSCAPG00000015887	-	100	87.656	ENSPEMG00000010899	Eif3c	96	87.656	Peromyscus_maniculatus_bairdii
ENSCAPG00000015887	-	100	86.086	ENSPCIG00000025206	-	96	86.312	Phascolarctos_cinereus
ENSCAPG00000015887	-	99	68.510	ENSPFOG00000004476	eif3c	95	68.552	Poecilia_formosa
ENSCAPG00000015887	-	99	66.899	ENSPLAG00000017480	eif3c	98	67.529	Poecilia_latipinna
ENSCAPG00000015887	-	99	69.266	ENSPMEG00000019512	eif3c	95	68.743	Poecilia_mexicana
ENSCAPG00000015887	-	99	67.555	ENSPREG00000023139	eif3c	96	67.015	Poecilia_reticulata
ENSCAPG00000015887	-	100	85.277	ENSPPYG00000007227	-	96	85.277	Pongo_abelii
ENSCAPG00000015887	-	69	87.438	ENSPCAG00000012710	-	100	87.438	Procavia_capensis
ENSCAPG00000015887	-	100	89.241	ENSPCOG00000019289	-	96	89.241	Propithecus_coquereli
ENSCAPG00000015887	-	100	88.675	ENSPVAG00000005804	-	96	88.675	Pteropus_vampyrus
ENSCAPG00000015887	-	62	64.122	ENSPNYG00000016530	eif3c	72	84.127	Pundamilia_nyererei
ENSCAPG00000015887	-	99	69.536	ENSPNAG00000024040	eif3c	95	70.215	Pygocentrus_nattereri
ENSCAPG00000015887	-	100	87.656	ENSRNOG00000018761	Eif3c	96	86.410	Rattus_norvegicus
ENSCAPG00000015887	-	98	87.082	ENSRBIG00000044009	-	94	87.384	Rhinopithecus_bieti
ENSCAPG00000015887	-	100	88.562	ENSRROG00000043626	-	96	88.562	Rhinopithecus_roxellana
ENSCAPG00000015887	-	62	31.605	YMR309C	-	65	31.605	Saccharomyces_cerevisiae
ENSCAPG00000015887	-	100	88.335	ENSSBOG00000032155	-	96	88.335	Saimiri_boliviensis_boliviensis
ENSCAPG00000015887	-	100	85.779	ENSSHAG00000011808	-	99	85.892	Sarcophilus_harrisii
ENSCAPG00000015887	-	99	69.897	ENSSFOG00015021823	eif3c	95	70.091	Scleropages_formosus
ENSCAPG00000015887	-	97	69.708	ENSSMAG00000016638	eif3c	93	69.825	Scophthalmus_maximus
ENSCAPG00000015887	-	99	69.490	ENSSDUG00000023117	eif3c	96	69.276	Seriola_dumerili
ENSCAPG00000015887	-	85	84.921	ENSSLDG00000009706	eif3c	89	84.921	Seriola_lalandi_dorsalis
ENSCAPG00000015887	-	100	75.819	ENSSPUG00000016470	-	96	76.723	Sphenodon_punctatus
ENSCAPG00000015887	-	99	69.032	ENSSPAG00000000426	eif3c	96	69.379	Stegastes_partitus
ENSCAPG00000015887	-	100	88.901	ENSSSCG00000034927	-	96	89.015	Sus_scrofa
ENSCAPG00000015887	-	99	67.817	ENSTRUG00000008951	eif3c	96	67.929	Takifugu_rubripes
ENSCAPG00000015887	-	99	67.345	ENSTNIG00000015210	eif3c	96	67.571	Tetraodon_nigroviridis
ENSCAPG00000015887	-	100	88.788	ENSTTRG00000005880	-	96	88.788	Tursiops_truncatus
ENSCAPG00000015887	-	75	88.923	ENSUAMG00000001127	-	96	84.219	Ursus_americanus
ENSCAPG00000015887	-	100	89.241	ENSUMAG00000010927	-	96	89.241	Ursus_maritimus
ENSCAPG00000015887	-	100	87.542	ENSVVUG00000025970	-	96	87.542	Vulpes_vulpes
ENSCAPG00000015887	-	100	70.982	ENSXETG00000002941	eif3c	96	70.871	Xenopus_tropicalis
ENSCAPG00000015887	-	99	68.687	ENSXMAG00000013796	eif3c	96	68.238	Xiphophorus_maculatus