EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000015955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HNRPDL|JKTBP|laAUF1
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 2511 bases
Position: chrAVPZ01000556.1:6525754-6528264
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000015957	RRM_1	PF00076.22	5.7e-23	1	2
ENSCAPP00000015957	RRM_1	PF00076.22	5.7e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019743	-	756	-	ENSCAPP00000015957	251 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000015955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000015955	-	100	44.048	ENSCAPG00000005367	HNRNPAB	99	45.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000015955	-	100	82.900	ENSG00000152795	HNRNPDL	89	82.900	Homo_sapiens
ENSCAPG00000015955	-	100	62.454	ENSAMEG00000007660	-	88	60.223	Ailuropoda_melanoleuca
ENSCAPG00000015955	-	100	82.900	ENSAMEG00000005145	-	72	82.900	Ailuropoda_melanoleuca
ENSCAPG00000015955	-	98	77.652	ENSAPLG00000011774	HNRNPDL	99	77.652	Anas_platyrhynchos
ENSCAPG00000015955	-	100	76.580	ENSACAG00000010416	HNRNPDL	85	76.580	Anolis_carolinensis
ENSCAPG00000015955	-	91	70.464	ENSANAG00000035255	-	99	68.487	Aotus_nancymaae
ENSCAPG00000015955	-	100	69.145	ENSANAG00000035355	-	89	69.145	Aotus_nancymaae
ENSCAPG00000015955	-	100	82.946	ENSANAG00000038001	-	89	82.946	Aotus_nancymaae
ENSCAPG00000015955	-	100	82.900	ENSANAG00000029054	HNRNPDL	52	100.000	Aotus_nancymaae
ENSCAPG00000015955	-	100	77.934	ENSANAG00000030316	-	82	77.934	Aotus_nancymaae
ENSCAPG00000015955	-	100	60.148	ENSAMXG00000001495	hnrnpdl	89	60.967	Astyanax_mexicanus
ENSCAPG00000015955	-	100	82.900	ENSBTAG00000014804	HNRNPDL	64	82.900	Bos_taurus
ENSCAPG00000015955	-	64	75.843	ENSCJAG00000045227	-	59	73.171	Callithrix_jacchus
ENSCAPG00000015955	-	100	82.900	ENSCJAG00000015197	-	52	100.000	Callithrix_jacchus
ENSCAPG00000015955	-	100	66.914	ENSCAFG00000000776	-	93	66.914	Canis_familiaris
ENSCAPG00000015955	-	100	82.900	ENSCAFG00000008940	HNRNPDL	64	82.900	Canis_familiaris
ENSCAPG00000015955	-	100	82.900	ENSCAFG00020010699	-	52	100.000	Canis_lupus_dingo
ENSCAPG00000015955	-	100	82.900	ENSCHIG00000010260	-	64	82.900	Capra_hircus
ENSCAPG00000015955	-	71	92.308	ENSCHIG00000026667	-	51	92.308	Capra_hircus
ENSCAPG00000015955	-	100	82.156	ENSTSYG00000031074	-	99	82.156	Carlito_syrichta
ENSCAPG00000015955	-	95	65.625	ENSTSYG00000036907	-	88	66.406	Carlito_syrichta
ENSCAPG00000015955	-	100	82.900	ENSCPOG00000015619	-	67	82.900	Cavia_porcellus
ENSCAPG00000015955	-	58	71.779	ENSCCAG00000020531	-	76	71.779	Cebus_capucinus
ENSCAPG00000015955	-	100	82.900	ENSCCAG00000020777	HNRNPDL	52	100.000	Cebus_capucinus
ENSCAPG00000015955	-	61	72.941	ENSCATG00000030349	-	73	73.171	Cercocebus_atys
ENSCAPG00000015955	-	100	84.074	ENSCATG00000038573	-	55	100.000	Cercocebus_atys
ENSCAPG00000015955	-	100	63.077	ENSCLAG00000010786	-	90	63.846	Chinchilla_lanigera
ENSCAPG00000015955	-	100	82.900	ENSCLAG00000008428	HNRNPDL	51	100.000	Chinchilla_lanigera
ENSCAPG00000015955	-	100	82.900	ENSCSAG00000004461	HNRNPDL	64	82.900	Chlorocebus_sabaeus
ENSCAPG00000015955	-	97	80.534	ENSCHOG00000009204	-	99	80.534	Choloepus_hoffmanni
ENSCAPG00000015955	-	100	81.784	ENSCHOG00000000160	-	92	81.784	Choloepus_hoffmanni
ENSCAPG00000015955	-	100	77.695	ENSCHOG00000003275	-	80	71.375	Choloepus_hoffmanni
ENSCAPG00000015955	-	100	81.784	ENSCHOG00000010831	-	80	81.784	Choloepus_hoffmanni
ENSCAPG00000015955	-	100	80.297	ENSCHOG00000002938	-	99	80.297	Choloepus_hoffmanni
ENSCAPG00000015955	-	100	78.148	ENSCPBG00000008014	HNRNPDL	89	78.148	Chrysemys_picta_bellii
ENSCAPG00000015955	-	100	82.900	ENSCANG00000020228	-	99	82.900	Colobus_angolensis_palliatus
ENSCAPG00000015955	-	100	82.528	ENSCGRG00001010960	Hnrnpdl	85	82.528	Cricetulus_griseus_chok1gshd
ENSCAPG00000015955	-	100	82.528	ENSCGRG00000011361	-	95	82.528	Cricetulus_griseus_crigri
ENSCAPG00000015955	-	100	59.108	ENSDARG00000003429	hnrnpdl	89	61.679	Danio_rerio
ENSCAPG00000015955	-	67	100.000	ENSDNOG00000033765	-	77	100.000	Dasypus_novemcinctus
ENSCAPG00000015955	-	96	77.132	ENSDNOG00000033760	-	83	77.132	Dasypus_novemcinctus
ENSCAPG00000015955	-	57	56.522	ENSDNOG00000046422	-	83	58.553	Dasypus_novemcinctus
ENSCAPG00000015955	-	100	82.156	ENSDNOG00000003887	-	64	82.156	Dasypus_novemcinctus
ENSCAPG00000015955	-	100	78.810	ENSDNOG00000018280	-	87	78.810	Dasypus_novemcinctus
ENSCAPG00000015955	-	100	52.593	ENSDNOG00000034016	-	93	51.661	Dasypus_novemcinctus
ENSCAPG00000015955	-	100	82.900	ENSDORG00000000968	-	64	82.900	Dipodomys_ordii
ENSCAPG00000015955	-	100	75.465	ENSDORG00000024157	-	89	76.952	Dipodomys_ordii
ENSCAPG00000015955	-	85	52.838	ENSETEG00000010820	-	100	51.528	Echinops_telfairi
ENSCAPG00000015955	-	100	82.900	ENSEASG00005016276	-	52	100.000	Equus_asinus_asinus
ENSCAPG00000015955	-	100	42.199	ENSEASG00005012961	-	64	48.780	Equus_asinus_asinus
ENSCAPG00000015955	-	100	41.852	ENSECAG00000040564	-	63	44.651	Equus_caballus
ENSCAPG00000015955	-	100	82.900	ENSECAG00000022692	HNRNPDL	52	100.000	Equus_caballus
ENSCAPG00000015955	-	100	82.900	ENSEEUG00000004301	-	65	82.900	Erinaceus_europaeus
ENSCAPG00000015955	-	100	63.569	ENSELUG00000003241	hnrnpdl	89	63.569	Esox_lucius
ENSCAPG00000015955	-	100	82.900	ENSFCAG00000000455	HNRNPDL	52	100.000	Felis_catus
ENSCAPG00000015955	-	100	77.695	ENSFALG00000005709	HNRNPDL	89	77.695	Ficedula_albicollis
ENSCAPG00000015955	-	100	82.900	ENSFDAG00000000851	-	98	82.900	Fukomys_damarensis
ENSCAPG00000015955	-	100	78.067	ENSGALG00000023199	HNRNPDL	89	78.067	Gallus_gallus
ENSCAPG00000015955	-	100	78.148	ENSGAGG00000003646	HNRNPDL	89	78.148	Gopherus_agassizii
ENSCAPG00000015955	-	100	82.900	ENSGGOG00000003714	HNRNPDL	52	100.000	Gorilla_gorilla
ENSCAPG00000015955	-	95	78.125	ENSHGLG00000013420	-	86	77.734	Heterocephalus_glaber_female
ENSCAPG00000015955	-	100	60.000	ENSHGLG00000014427	-	61	96.154	Heterocephalus_glaber_female
ENSCAPG00000015955	-	100	82.528	ENSHGLG00000015791	HNRNPDL	64	82.528	Heterocephalus_glaber_female
ENSCAPG00000015955	-	100	63.941	ENSHGLG00100010072	-	86	61.338	Heterocephalus_glaber_male
ENSCAPG00000015955	-	99	70.722	ENSHGLG00100019080	-	85	70.722	Heterocephalus_glaber_male
ENSCAPG00000015955	-	100	82.528	ENSHGLG00100005262	HNRNPDL	79	82.528	Heterocephalus_glaber_male
ENSCAPG00000015955	-	100	68.627	ENSHGLG00100016282	-	88	64.314	Heterocephalus_glaber_male
ENSCAPG00000015955	-	100	68.889	ENSHGLG00100017644	-	91	67.407	Heterocephalus_glaber_male
ENSCAPG00000015955	-	100	58.889	ENSIPUG00000024951	hnrnpdl	89	60.741	Ictalurus_punctatus
ENSCAPG00000015955	-	100	82.900	ENSSTOG00000013979	HNRNPDL	52	100.000	Ictidomys_tridecemlineatus
ENSCAPG00000015955	-	100	82.900	ENSJJAG00000021673	Hnrnpdl	64	82.900	Jaculus_jaculus
ENSCAPG00000015955	-	68	100.000	ENSJJAG00000000674	-	72	53.532	Jaculus_jaculus
ENSCAPG00000015955	-	67	100.000	ENSLACG00000003613	HNRNPDL	85	100.000	Latimeria_chalumnae
ENSCAPG00000015955	-	100	63.197	ENSLOCG00000010736	hnrnpdl	89	62.825	Lepisosteus_oculatus
ENSCAPG00000015955	-	87	43.750	ENSLAFG00000031444	-	62	49.091	Loxodonta_africana
ENSCAPG00000015955	-	100	82.528	ENSLAFG00000008612	HNRNPDL	90	82.528	Loxodonta_africana
ENSCAPG00000015955	-	100	82.900	ENSMFAG00000002275	HNRNPDL	52	100.000	Macaca_fascicularis
ENSCAPG00000015955	-	100	80.556	ENSMMUG00000015777	HNRNPDL	100	80.556	Macaca_mulatta
ENSCAPG00000015955	-	100	82.900	ENSMNEG00000045130	HNRNPDL	52	100.000	Macaca_nemestrina
ENSCAPG00000015955	-	100	82.900	ENSMLEG00000041600	HNRNPDL	89	82.900	Mandrillus_leucophaeus
ENSCAPG00000015955	-	100	83.525	ENSMLEG00000014825	-	89	82.759	Mandrillus_leucophaeus
ENSCAPG00000015955	-	100	75.836	ENSMGAG00000008033	HNRNPDL	99	75.836	Meleagris_gallopavo
ENSCAPG00000015955	-	100	82.156	ENSMAUG00000011132	Hnrnpdl	85	82.156	Mesocricetus_auratus
ENSCAPG00000015955	-	63	73.864	ENSMICG00000037040	-	75	71.951	Microcebus_murinus
ENSCAPG00000015955	-	100	82.528	ENSMICG00000001445	-	50	100.000	Microcebus_murinus
ENSCAPG00000015955	-	100	82.156	ENSMOCG00000015928	Hnrnpdl	64	82.156	Microtus_ochrogaster
ENSCAPG00000015955	-	68	100.000	ENSMODG00000006825	-	78	100.000	Monodelphis_domestica
ENSCAPG00000015955	-	100	82.900	ENSMODG00000011916	-	65	82.900	Monodelphis_domestica
ENSCAPG00000015955	-	100	82.528	ENSMUSG00000029328	Hnrnpdl	83	82.528	Mus_musculus
ENSCAPG00000015955	-	100	82.156	MGP_PahariEiJ_G0017226	Hnrnpdl	84	82.156	Mus_pahari
ENSCAPG00000015955	-	100	82.528	MGP_SPRETEiJ_G0028445	Hnrnpdl	84	82.528	Mus_spretus
ENSCAPG00000015955	-	100	82.824	ENSMPUG00000014753	-	99	82.824	Mustela_putorius_furo
ENSCAPG00000015955	-	100	77.820	ENSMPUG00000009986	-	82	77.820	Mustela_putorius_furo
ENSCAPG00000015955	-	100	65.779	ENSMPUG00000006259	-	93	65.779	Mustela_putorius_furo
ENSCAPG00000015955	-	99	59.160	ENSMPUG00000011188	-	99	52.190	Mustela_putorius_furo
ENSCAPG00000015955	-	98	60.606	ENSMLUG00000025989	-	84	56.641	Myotis_lucifugus
ENSCAPG00000015955	-	100	82.900	ENSMLUG00000014452	-	64	82.900	Myotis_lucifugus
ENSCAPG00000015955	-	100	81.784	ENSNGAG00000015740	Hnrnpdl	64	81.784	Nannospalax_galili
ENSCAPG00000015955	-	100	82.900	ENSNLEG00000008636	HNRNPDL	52	100.000	Nomascus_leucogenys
ENSCAPG00000015955	-	100	69.776	ENSMEUG00000010033	HNRNPDL	81	68.657	Notamacropus_eugenii
ENSCAPG00000015955	-	63	75.568	ENSMEUG00000011454	-	68	73.171	Notamacropus_eugenii
ENSCAPG00000015955	-	100	81.784	ENSOPRG00000007178	-	99	81.784	Ochotona_princeps
ENSCAPG00000015955	-	100	80.669	ENSODEG00000020231	-	76	80.669	Octodon_degus
ENSCAPG00000015955	-	100	76.580	ENSODEG00000004187	-	89	76.580	Octodon_degus
ENSCAPG00000015955	-	92	81.048	ENSODEG00000002106	-	59	81.048	Octodon_degus
ENSCAPG00000015955	-	93	79.681	ENSODEG00000000376	-	72	79.681	Octodon_degus
ENSCAPG00000015955	-	100	78.439	ENSODEG00000003135	-	90	78.439	Octodon_degus
ENSCAPG00000015955	-	100	82.900	ENSOANG00000004651	HNRNPDL	99	82.900	Ornithorhynchus_anatinus
ENSCAPG00000015955	-	68	45.745	ENSOCUG00000025252	-	76	47.561	Oryctolagus_cuniculus
ENSCAPG00000015955	-	100	82.900	ENSOCUG00000013805	-	66	82.900	Oryctolagus_cuniculus
ENSCAPG00000015955	-	64	67.416	ENSOGAG00000031703	-	72	67.683	Otolemur_garnettii
ENSCAPG00000015955	-	100	39.852	ENSOGAG00000024995	-	56	48.171	Otolemur_garnettii
ENSCAPG00000015955	-	100	79.926	ENSOGAG00000002501	-	64	80.297	Otolemur_garnettii
ENSCAPG00000015955	-	67	95.238	ENSOARG00000011472	-	65	95.238	Ovis_aries
ENSCAPG00000015955	-	58	71.631	ENSOARG00000002402	-	54	69.504	Ovis_aries
ENSCAPG00000015955	-	100	82.900	ENSOARG00000000824	-	83	82.900	Ovis_aries
ENSCAPG00000015955	-	100	82.900	ENSPPAG00000043177	HNRNPDL	52	100.000	Pan_paniscus
ENSCAPG00000015955	-	100	82.900	ENSPPRG00000013787	HNRNPDL	52	100.000	Panthera_pardus
ENSCAPG00000015955	-	100	82.900	ENSPTIG00000018505	HNRNPDL	89	82.900	Panthera_tigris_altaica
ENSCAPG00000015955	-	100	82.900	ENSPTRG00000016217	HNRNPDL	52	100.000	Pan_troglodytes
ENSCAPG00000015955	-	100	82.900	ENSPANG00000004761	HNRNPDL	52	100.000	Papio_anubis
ENSCAPG00000015955	-	100	64.207	ENSPKIG00000025514	hnrnpdl	89	62.454	Paramormyrops_kingsleyae
ENSCAPG00000015955	-	100	78.519	ENSPSIG00000016746	HNRNPDL	81	78.519	Pelodiscus_sinensis
ENSCAPG00000015955	-	100	82.156	ENSPEMG00000016545	-	91	82.156	Peromyscus_maniculatus_bairdii
ENSCAPG00000015955	-	100	82.900	ENSPCIG00000003089	-	52	100.000	Phascolarctos_cinereus
ENSCAPG00000015955	-	65	61.111	ENSPCIG00000009814	-	61	61.350	Phascolarctos_cinereus
ENSCAPG00000015955	-	100	82.900	ENSPPYG00000014886	HNRNPDL	64	82.900	Pongo_abelii
ENSCAPG00000015955	-	100	82.528	ENSPCAG00000011543	HNRNPDL	64	82.528	Procavia_capensis
ENSCAPG00000015955	-	100	82.528	ENSPCOG00000019831	-	52	100.000	Propithecus_coquereli
ENSCAPG00000015955	-	100	71.004	ENSPVAG00000006816	HNRNPDL	64	71.004	Pteropus_vampyrus
ENSCAPG00000015955	-	92	59.677	ENSPNAG00000016380	hnrnpdl	72	58.411	Pygocentrus_nattereri
ENSCAPG00000015955	-	100	80.669	ENSRNOG00000002270	Hnrnpdl	83	80.669	Rattus_norvegicus
ENSCAPG00000015955	-	100	82.900	ENSRBIG00000030310	HNRNPDL	52	100.000	Rhinopithecus_bieti
ENSCAPG00000015955	-	100	82.900	ENSRROG00000034174	HNRNPDL	52	100.000	Rhinopithecus_roxellana
ENSCAPG00000015955	-	100	81.275	ENSSBOG00000022627	-	95	81.124	Saimiri_boliviensis_boliviensis
ENSCAPG00000015955	-	91	68.465	ENSSBOG00000028904	-	99	67.635	Saimiri_boliviensis_boliviensis
ENSCAPG00000015955	-	99	76.030	ENSSBOG00000020566	-	90	76.030	Saimiri_boliviensis_boliviensis
ENSCAPG00000015955	-	100	82.900	ENSSHAG00000013616	-	72	82.900	Sarcophilus_harrisii
ENSCAPG00000015955	-	100	63.569	ENSSFOG00015005893	hnrnpdl	89	63.569	Scleropages_formosus
ENSCAPG00000015955	-	100	76.132	ENSSARG00000009961	-	98	76.132	Sorex_araneus
ENSCAPG00000015955	-	100	70.370	ENSSPUG00000013700	HNRNPDL	89	71.481	Sphenodon_punctatus
ENSCAPG00000015955	-	100	42.593	ENSSSCG00000012473	-	56	51.250	Sus_scrofa
ENSCAPG00000015955	-	100	83.271	ENSSSCG00000037245	-	52	100.000	Sus_scrofa
ENSCAPG00000015955	-	100	77.323	ENSTGUG00000002850	HNRNPDL	99	77.323	Taeniopygia_guttata
ENSCAPG00000015955	-	93	82.143	ENSTBEG00000002817	-	64	81.746	Tupaia_belangeri
ENSCAPG00000015955	-	100	77.695	ENSTTRG00000001793	-	64	77.695	Tursiops_truncatus
ENSCAPG00000015955	-	100	82.900	ENSUAMG00000011358	HNRNPDL	52	100.000	Ursus_americanus
ENSCAPG00000015955	-	100	82.900	ENSUMAG00000008681	HNRNPDL	52	100.000	Ursus_maritimus
ENSCAPG00000015955	-	100	76.208	ENSVPAG00000002422	-	99	76.208	Vicugna_pacos
ENSCAPG00000015955	-	100	82.900	ENSVVUG00000024653	HNRNPDL	52	100.000	Vulpes_vulpes
ENSCAPG00000015955	-	100	74.453	ENSVVUG00000013596	-	89	72.993	Vulpes_vulpes
ENSCAPG00000015955	-	78	56.831	ENSVVUG00000001421	-	95	56.593	Vulpes_vulpes
ENSCAPG00000015955	-	100	67.528	ENSXETG00000023026	hnrnpdl	90	66.790	Xenopus_tropicalis