EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAPG00000015984 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Cavia_aperea
Status
putative
Strand
Minus strand
Length
15420 bases
Position
chrAVPZ01000049.1:1574277-1589696
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAPP00000016034PABPPF00658.189.2e-3211
ENSCAPP00000016022PABPPF00658.184.3e-3111
ENSCAPP00000016021PABPPF00658.184.9e-3111
ENSCAPP00000016034RRM_5PF13893.63.1e-0911
ENSCAPP00000016022RRM_5PF13893.64e-0911
ENSCAPP00000016021RRM_5PF13893.65.1e-0911
ENSCAPP00000016034RRM_1PF00076.224.2e-9214
ENSCAPP00000016034RRM_1PF00076.224.2e-9224
ENSCAPP00000016034RRM_1PF00076.224.2e-9234
ENSCAPP00000016034RRM_1PF00076.224.2e-9244
ENSCAPP00000016022RRM_1PF00076.225.3e-9214
ENSCAPP00000016022RRM_1PF00076.225.3e-9224
ENSCAPP00000016022RRM_1PF00076.225.3e-9234
ENSCAPP00000016022RRM_1PF00076.225.3e-9244
ENSCAPP00000016021RRM_1PF00076.226.8e-9214
ENSCAPP00000016021RRM_1PF00076.226.8e-9224
ENSCAPP00000016021RRM_1PF00076.226.8e-9234
ENSCAPP00000016021RRM_1PF00076.226.8e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAPT00000019808PABPC4-2011977-ENSCAPP00000016021658 (aa)--
ENSCAPT00000019809PABPC4-2021890-ENSCAPP00000016022629 (aa)--
ENSCAPT00000019821PABPC4-2031806-ENSCAPP00000016034601 (aa)--
Gene Model
Click here to download ENSCAPG00000015984's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000015984's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAPG00000015984PABPC45734.940ENSCAPG00000003609ELAVL29934.940
ENSCAPG00000015984PABPC46268.657ENSCAPG00000000555PABPC4L10068.657
ENSCAPG00000015984PABPC49862.385ENSCAPG00000014519PABPC1L9961.355
ENSCAPG00000015984PABPC45630.952ENSCAPG00000005993ELAVL47730.952
ENSCAPG00000015984PABPC46064.407ENSCAPG00000010714PABPC59364.407
ENSCAPG00000015984PABPC47130.864ENSCAPG00000017278TIA19730.864
ENSCAPG00000015984PABPC49475.623ENSCAPG00000013098PABPC19875.758
ENSCAPG00000015984PABPC46135.088ENSCAPG00000009014ELAVL19435.088
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAPG00000015984PABPC410099.392ENSG00000090621PABPC499100.000Homo_sapiens
ENSCAPG00000015984PABPC49982.989ENSAPOG00000001161pabpc49983.360Acanthochromis_polyacanthus
ENSCAPG00000015984PABPC410098.632ENSAMEG00000011535-9998.632Ailuropoda_melanoleuca
ENSCAPG00000015984PABPC49957.235ENSAMEG00000015083-9956.913Ailuropoda_melanoleuca
ENSCAPG00000015984PABPC410082.381ENSACIG00000023343pabpc49983.148Amphilophus_citrinellus
ENSCAPG00000015984PABPC49983.280ENSAOCG00000021529pabpc49983.654Amphiprion_ocellaris
ENSCAPG00000015984PABPC49983.280ENSAPEG00000019196pabpc49983.654Amphiprion_percula
ENSCAPG00000015984PABPC49982.540ENSATEG00000007402pabpc49982.588Anabas_testudineus
ENSCAPG00000015984PABPC49991.774ENSAPLG00000009729-10091.774Anas_platyrhynchos
ENSCAPG00000015984PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSCAPG00000015984PABPC410099.544ENSANAG00000025079PABPC49999.544Aotus_nancymaae
ENSCAPG00000015984PABPC410082.456ENSACLG00000019558pabpc49982.866Astatotilapia_calliptera
ENSCAPG00000015984PABPC49978.981ENSAMXG00000018779pabpc49979.618Astyanax_mexicanus
ENSCAPG00000015984PABPC46087.273ENSBTAG00000048536-9787.273Bos_taurus
ENSCAPG00000015984PABPC410096.510ENSBTAG00000017125PABPC49996.510Bos_taurus
ENSCAPG00000015984PABPC47889.754ENSCJAG00000045953-9289.712Callithrix_jacchus
ENSCAPG00000015984PABPC410099.088ENSCJAG00000002512-9999.088Callithrix_jacchus
ENSCAPG00000015984PABPC410098.887ENSCAFG00000003081PABPC49998.887Canis_familiaris
ENSCAPG00000015984PABPC410098.784ENSCAFG00020004161PABPC49998.784Canis_lupus_dingo
ENSCAPG00000015984PABPC410098.936ENSCHIG00000019398-9998.936Capra_hircus
ENSCAPG00000015984PABPC410076.596ENSCHIG00000023385-9976.596Capra_hircus
ENSCAPG00000015984PABPC410099.088ENSTSYG00000006532PABPC49999.088Carlito_syrichta
ENSCAPG00000015984PABPC410099.696ENSCPOG00000009552PABPC49999.696Cavia_porcellus
ENSCAPG00000015984PABPC410099.240ENSCCAG00000037306PABPC49999.240Cebus_capucinus
ENSCAPG00000015984PABPC410099.544ENSCATG00000042164PABPC49999.544Cercocebus_atys
ENSCAPG00000015984PABPC410099.088ENSCLAG00000011899PABPC49999.088Chinchilla_lanigera
ENSCAPG00000015984PABPC410099.544ENSCSAG00000001135PABPC49999.544Chlorocebus_sabaeus
ENSCAPG00000015984PABPC49197.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSCAPG00000015984PABPC49991.547ENSCPBG00000001038PABPC49991.547Chrysemys_picta_bellii
ENSCAPG00000015984PABPC49999.386ENSCANG00000034177PABPC410099.386Colobus_angolensis_palliatus
ENSCAPG00000015984PABPC410097.583ENSCGRG00001018166Pabpc49997.583Cricetulus_griseus_chok1gshd
ENSCAPG00000015984PABPC49995.115ENSCGRG00000009777Pabpc410095.115Cricetulus_griseus_crigri
ENSCAPG00000015984PABPC410081.818ENSCSEG00000000130pabpc49982.456Cynoglossus_semilaevis
ENSCAPG00000015984PABPC49983.307ENSCVAG00000019246pabpc410083.819Cyprinodon_variegatus
ENSCAPG00000015984PABPC49984.848ENSDARG00000059259pabpc49985.620Danio_rerio
ENSCAPG00000015984PABPC49999.107ENSDNOG00000018444-10099.107Dasypus_novemcinctus
ENSCAPG00000015984PABPC410097.264ENSDORG00000011581Pabpc49997.264Dipodomys_ordii
ENSCAPG00000015984PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCAPG00000015984PABPC48665.370ENSETEG00000009172-9965.385Echinops_telfairi
ENSCAPG00000015984PABPC49977.205ENSEBUG00000000992pabpc49980.435Eptatretus_burgeri
ENSCAPG00000015984PABPC49776.623ENSEBUG00000013782pabpc49975.676Eptatretus_burgeri
ENSCAPG00000015984PABPC410099.240ENSEASG00005014119PABPC49999.240Equus_asinus_asinus
ENSCAPG00000015984PABPC410099.240ENSECAG00000009396PABPC49999.240Equus_caballus
ENSCAPG00000015984PABPC410095.897ENSEEUG00000002962PABPC49995.897Erinaceus_europaeus
ENSCAPG00000015984PABPC49983.280ENSELUG00000003195pabpc49883.861Esox_lucius
ENSCAPG00000015984PABPC410098.936ENSFCAG00000015254-9998.936Felis_catus
ENSCAPG00000015984PABPC49990.750ENSFALG00000000543PABPC49990.750Ficedula_albicollis
ENSCAPG00000015984PABPC49067.695ENSFDAG00000010581-10063.529Fukomys_damarensis
ENSCAPG00000015984PABPC410099.392ENSFDAG00000020016-9999.392Fukomys_damarensis
ENSCAPG00000015984PABPC410082.748ENSFHEG00000007548pabpc49588.720Fundulus_heteroclitus
ENSCAPG00000015984PABPC49982.884ENSGMOG00000019025pabpc49883.043Gadus_morhua
ENSCAPG00000015984PABPC49991.561ENSGALG00000003800PABPC49991.561Gallus_gallus
ENSCAPG00000015984PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCAPG00000015984PABPC410081.348ENSGACG00000007179pabpc49981.949Gasterosteus_aculeatus
ENSCAPG00000015984PABPC49991.388ENSGAGG00000001888PABPC49991.388Gopherus_agassizii
ENSCAPG00000015984PABPC410099.392ENSGGOG00000004002PABPC49999.392Gorilla_gorilla
ENSCAPG00000015984PABPC410082.616ENSHBUG00000020206pabpc49983.022Haplochromis_burtoni
ENSCAPG00000015984PABPC410099.544ENSHGLG00000011162PABPC49999.544Heterocephalus_glaber_female
ENSCAPG00000015984PABPC410099.523ENSHGLG00100001580PABPC49999.523Heterocephalus_glaber_male
ENSCAPG00000015984PABPC410081.947ENSHCOG00000012694pabpc49982.109Hippocampus_comes
ENSCAPG00000015984PABPC49882.797ENSIPUG00000016620pabpc49981.171Ictalurus_punctatus
ENSCAPG00000015984PABPC410096.960ENSSTOG00000010416PABPC49996.960Ictidomys_tridecemlineatus
ENSCAPG00000015984PABPC410094.377ENSJJAG00000007781Pabpc49994.377Jaculus_jaculus
ENSCAPG00000015984PABPC49991.244ENSKMAG00000013597pabpc49983.333Kryptolebias_marmoratus
ENSCAPG00000015984PABPC410082.344ENSLBEG00000013654pabpc49981.692Labrus_bergylta
ENSCAPG00000015984PABPC49988.095ENSLACG00000011907PABPC49988.095Latimeria_chalumnae
ENSCAPG00000015984PABPC410085.331ENSLOCG00000001877pabpc49986.120Lepisosteus_oculatus
ENSCAPG00000015984PABPC410098.784ENSLAFG00000000151PABPC49998.784Loxodonta_africana
ENSCAPG00000015984PABPC410099.544ENSMFAG00000041481PABPC49999.544Macaca_fascicularis
ENSCAPG00000015984PABPC410099.544ENSMMUG00000007497PABPC49999.544Macaca_mulatta
ENSCAPG00000015984PABPC410099.392ENSMNEG00000043054PABPC49999.392Macaca_nemestrina
ENSCAPG00000015984PABPC410099.544ENSMLEG00000040716PABPC49999.544Mandrillus_leucophaeus
ENSCAPG00000015984PABPC49982.962ENSMAMG00000010025pabpc49982.132Mastacembelus_armatus
ENSCAPG00000015984PABPC410082.645ENSMZEG00005006141pabpc49982.710Maylandia_zebra
ENSCAPG00000015984PABPC49987.564ENSMGAG00000005408PABPC410087.564Meleagris_gallopavo
ENSCAPG00000015984PABPC46081.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCAPG00000015984PABPC410080.247ENSMAUG00000019763-9980.247Mesocricetus_auratus
ENSCAPG00000015984PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSCAPG00000015984PABPC49984.673ENSMICG00000036729-10085.080Microcebus_murinus
ENSCAPG00000015984PABPC48996.250ENSMICG00000016633-9799.149Microcebus_murinus
ENSCAPG00000015984PABPC410098.036ENSMOCG00000006763Pabpc49998.036Microtus_ochrogaster
ENSCAPG00000015984PABPC410083.934ENSMMOG00000002363pabpc49981.789Mola_mola
ENSCAPG00000015984PABPC46274.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSCAPG00000015984PABPC49889.009ENSMODG00000017657-9988.737Monodelphis_domestica
ENSCAPG00000015984PABPC49982.409ENSMALG00000011017pabpc49981.988Monopterus_albus
ENSCAPG00000015984PABPC410097.872MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCAPG00000015984PABPC49984.068MGP_CAROLIEiJ_G0024864-10084.068Mus_caroli
ENSCAPG00000015984PABPC410098.176ENSMUSG00000011257Pabpc49999.398Mus_musculus
ENSCAPG00000015984PABPC49997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCAPG00000015984PABPC49978.900MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCAPG00000015984PABPC49653.642ENSMPUG00000006836-10053.477Mustela_putorius_furo
ENSCAPG00000015984PABPC410098.936ENSMPUG00000014414-9998.936Mustela_putorius_furo
ENSCAPG00000015984PABPC410096.184ENSMLUG00000012068PABPC49996.184Myotis_lucifugus
ENSCAPG00000015984PABPC410096.809ENSNGAG00000018292Pabpc49996.809Nannospalax_galili
ENSCAPG00000015984PABPC47086.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSCAPG00000015984PABPC46292.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCAPG00000015984PABPC410099.523ENSNLEG00000011928PABPC49999.523Nomascus_leucogenys
ENSCAPG00000015984PABPC49095.238ENSOPRG00000011984PABPC48698.520Ochotona_princeps
ENSCAPG00000015984PABPC410098.632ENSODEG00000006592-9998.632Octodon_degus
ENSCAPG00000015984PABPC45585.714ENSODEG00000013457-10085.714Octodon_degus
ENSCAPG00000015984PABPC49989.117ENSODEG00000017434-10089.002Octodon_degus
ENSCAPG00000015984PABPC410082.616ENSONIG00000008176pabpc49983.387Oreochromis_niloticus
ENSCAPG00000015984PABPC49991.534ENSOANG00000010001PABPC49991.534Ornithorhynchus_anatinus
ENSCAPG00000015984PABPC49698.889ENSOCUG00000000562PABPC48898.889Oryctolagus_cuniculus
ENSCAPG00000015984PABPC49990.994ENSORLG00000017479pabpc49990.994Oryzias_latipes
ENSCAPG00000015984PABPC49990.994ENSORLG00020018644pabpc49891.277Oryzias_latipes_hni
ENSCAPG00000015984PABPC49990.994ENSORLG00015015042pabpc49891.277Oryzias_latipes_hsok
ENSCAPG00000015984PABPC49982.962ENSOMEG00000014410pabpc49983.570Oryzias_melastigma
ENSCAPG00000015984PABPC410096.520ENSOGAG00000004067PABPC49996.520Otolemur_garnettii
ENSCAPG00000015984PABPC410098.936ENSOARG00000020060PABPC49998.936Ovis_aries
ENSCAPG00000015984PABPC410099.392ENSPPAG00000043625PABPC49999.392Pan_paniscus
ENSCAPG00000015984PABPC410098.936ENSPPRG00000024727PABPC49998.936Panthera_pardus
ENSCAPG00000015984PABPC410098.936ENSPTIG00000005829PABPC49998.936Panthera_tigris_altaica
ENSCAPG00000015984PABPC410099.392ENSPTRG00000000573PABPC49999.392Pan_troglodytes
ENSCAPG00000015984PABPC410099.392ENSPANG00000009484PABPC49999.392Papio_anubis
ENSCAPG00000015984PABPC410084.641ENSPKIG00000025356pabpc49985.285Paramormyrops_kingsleyae
ENSCAPG00000015984PABPC49991.547ENSPSIG00000016892PABPC49991.547Pelodiscus_sinensis
ENSCAPG00000015984PABPC410084.959ENSPMGG00000009073pabpc49983.361Periophthalmus_magnuspinnatus
ENSCAPG00000015984PABPC49991.324ENSPEMG00000024193-9991.324Peromyscus_maniculatus_bairdii
ENSCAPG00000015984PABPC410097.568ENSPEMG00000023569-9997.568Peromyscus_maniculatus_bairdii
ENSCAPG00000015984PABPC48973.730ENSPMAG00000002836pabpc49973.785Petromyzon_marinus
ENSCAPG00000015984PABPC49770.902ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSCAPG00000015984PABPC49894.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSCAPG00000015984PABPC410082.109ENSPFOG00000002682pabpc49983.200Poecilia_formosa
ENSCAPG00000015984PABPC410081.949ENSPLAG00000010112pabpc49983.040Poecilia_latipinna
ENSCAPG00000015984PABPC49983.067ENSPMEG00000019739pabpc49983.387Poecilia_mexicana
ENSCAPG00000015984PABPC410083.371ENSPREG00000001589pabpc49983.562Poecilia_reticulata
ENSCAPG00000015984PABPC410099.392ENSPPYG00000001506PABPC49999.392Pongo_abelii
ENSCAPG00000015984PABPC410093.921ENSPCAG00000003341PABPC49993.921Procavia_capensis
ENSCAPG00000015984PABPC410099.241ENSPCOG00000023725-9999.241Propithecus_coquereli
ENSCAPG00000015984PABPC49981.664ENSPCOG00000025882-9593.069Propithecus_coquereli
ENSCAPG00000015984PABPC49998.319ENSPVAG00000002187PABPC410098.319Pteropus_vampyrus
ENSCAPG00000015984PABPC410082.456ENSPNYG00000006134pabpc49982.866Pundamilia_nyererei
ENSCAPG00000015984PABPC410083.176ENSPNAG00000024355pabpc49982.512Pygocentrus_nattereri
ENSCAPG00000015984PABPC410093.769ENSRNOG00000028592AABR07035074.19993.769Rattus_norvegicus
ENSCAPG00000015984PABPC410095.897ENSRNOG00000015642Pabpc49995.897Rattus_norvegicus
ENSCAPG00000015984PABPC410099.544ENSRBIG00000039761PABPC49999.544Rhinopithecus_bieti
ENSCAPG00000015984PABPC410099.544ENSRROG00000033355PABPC49999.544Rhinopithecus_roxellana
ENSCAPG00000015984PABPC410099.088ENSSBOG00000026193PABPC49999.088Saimiri_boliviensis_boliviensis
ENSCAPG00000015984PABPC49892.370ENSSHAG00000018139PABPC49992.026Sarcophilus_harrisii
ENSCAPG00000015984PABPC49985.386ENSSFOG00015023514pabpc49984.142Scleropages_formosus
ENSCAPG00000015984PABPC49982.512ENSSMAG00000009007pabpc49882.177Scophthalmus_maximus
ENSCAPG00000015984PABPC49982.484ENSSDUG00000012683pabpc49587.991Seriola_dumerili
ENSCAPG00000015984PABPC49982.484ENSSLDG00000013025pabpc49982.880Seriola_lalandi_dorsalis
ENSCAPG00000015984PABPC49991.933ENSSARG00000000310PABPC49991.933Sorex_araneus
ENSCAPG00000015984PABPC49989.793ENSSPUG00000003204PABPC49989.793Sphenodon_punctatus
ENSCAPG00000015984PABPC49990.519ENSSPAG00000009252pabpc49983.056Stegastes_partitus
ENSCAPG00000015984PABPC410099.088ENSSSCG00000003660-9999.088Sus_scrofa
ENSCAPG00000015984PABPC49049.832ENSSSCG00000036170-9649.832Sus_scrofa
ENSCAPG00000015984PABPC49987.386ENSTGUG00000001266PABPC49987.386Taeniopygia_guttata
ENSCAPG00000015984PABPC410081.862ENSTRUG00000005907pabpc49982.504Takifugu_rubripes
ENSCAPG00000015984PABPC410079.579ENSTNIG00000016902pabpc49979.579Tetraodon_nigroviridis
ENSCAPG00000015984PABPC49988.067ENSTBEG00000009035PABPC410088.067Tupaia_belangeri
ENSCAPG00000015984PABPC49982.950ENSTTRG00000014340PABPC410086.723Tursiops_truncatus
ENSCAPG00000015984PABPC410098.728ENSUAMG00000000303PABPC49998.728Ursus_americanus
ENSCAPG00000015984PABPC410098.632ENSUMAG00000019585PABPC410098.571Ursus_maritimus
ENSCAPG00000015984PABPC48497.163ENSVPAG00000010041PABPC47797.163Vicugna_pacos
ENSCAPG00000015984PABPC410098.887ENSVVUG00000005215PABPC49998.887Vulpes_vulpes
ENSCAPG00000015984PABPC49983.280ENSXETG00000010946pabpc49983.280Xenopus_tropicalis
ENSCAPG00000015984PABPC46498.182ENSXETG00000027221-9997.590Xenopus_tropicalis
ENSCAPG00000015984PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSCAPG00000015984PABPC410082.268ENSXMAG00000019007pabpc49983.040Xiphophorus_maculatus

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