EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016056 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 25098 bases
Position: chrAVPZ01000300.1:4660736-4685833
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016092	FRG1	PF06229.12	2.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000019879	-	738	-	ENSCAPP00000016092	245 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016056	-	98	95.816	ENSG00000109536	FRG1	100	99.138	Homo_sapiens
ENSCAPG00000016056	-	91	75.336	ENSAPOG00000001060	frg1	87	75.336	Acanthochromis_polyacanthus
ENSCAPG00000016056	-	98	96.653	ENSAMEG00000013503	FRG1	93	96.653	Ailuropoda_melanoleuca
ENSCAPG00000016056	-	91	74.888	ENSACIG00000022283	frg1	100	74.888	Amphilophus_citrinellus
ENSCAPG00000016056	-	91	74.888	ENSAOCG00000024240	frg1	87	74.888	Amphiprion_ocellaris
ENSCAPG00000016056	-	91	74.439	ENSAPEG00000002486	frg1	87	74.439	Amphiprion_percula
ENSCAPG00000016056	-	91	72.197	ENSATEG00000010414	frg1	90	73.148	Anabas_testudineus
ENSCAPG00000016056	-	91	88.341	ENSAPLG00000007785	-	89	87.719	Anas_platyrhynchos
ENSCAPG00000016056	-	92	82.222	ENSACAG00000006877	-	89	81.579	Anolis_carolinensis
ENSCAPG00000016056	-	98	96.250	ENSANAG00000020876	FRG1	93	96.250	Aotus_nancymaae
ENSCAPG00000016056	-	88	72.093	ENSACLG00000027065	frg1	88	72.093	Astatotilapia_calliptera
ENSCAPG00000016056	-	90	75.566	ENSAMXG00000032700	frg1	93	72.803	Astyanax_mexicanus
ENSCAPG00000016056	-	98	96.653	ENSBTAG00000007089	FRG1	93	96.653	Bos_taurus
ENSCAPG00000016056	-	87	43.421	WBGene00014177	frg-1	82	43.421	Caenorhabditis_elegans
ENSCAPG00000016056	-	98	96.250	ENSCJAG00000011272	FRG1	96	95.288	Callithrix_jacchus
ENSCAPG00000016056	-	98	96.653	ENSCAFG00000007135	FRG1	93	96.653	Canis_familiaris
ENSCAPG00000016056	-	87	99.061	ENSCAFG00020000082	-	85	99.061	Canis_lupus_dingo
ENSCAPG00000016056	-	98	96.653	ENSCHIG00000011585	-	93	96.653	Capra_hircus
ENSCAPG00000016056	-	91	71.429	ENSTSYG00000031599	-	87	71.429	Carlito_syrichta
ENSCAPG00000016056	-	97	98.734	ENSCPOG00000022277	-	92	98.734	Cavia_porcellus
ENSCAPG00000016056	-	98	96.250	ENSCCAG00000024627	FRG1	93	96.250	Cebus_capucinus
ENSCAPG00000016056	-	98	95.397	ENSCATG00000029230	FRG1	93	95.397	Cercocebus_atys
ENSCAPG00000016056	-	92	67.111	ENSCLAG00000006068	-	88	66.667	Chinchilla_lanigera
ENSCAPG00000016056	-	97	98.312	ENSCLAG00000000370	-	92	98.312	Chinchilla_lanigera
ENSCAPG00000016056	-	89	70.046	ENSCLAG00000009263	-	87	69.778	Chinchilla_lanigera
ENSCAPG00000016056	-	90	84.545	ENSCLAG00000004960	-	86	84.889	Chinchilla_lanigera
ENSCAPG00000016056	-	98	95.397	ENSCSAG00000002899	FRG1	93	95.397	Chlorocebus_sabaeus
ENSCAPG00000016056	-	88	91.667	ENSCSAG00000017729	-	100	91.667	Chlorocebus_sabaeus
ENSCAPG00000016056	-	92	87.556	ENSCPBG00000009211	-	88	86.842	Chrysemys_picta_bellii
ENSCAPG00000016056	-	89	56.364	ENSCING00000005161	-	82	56.364	Ciona_intestinalis
ENSCAPG00000016056	-	54	53.788	ENSCSAVG00000008018	-	78	51.049	Ciona_savignyi
ENSCAPG00000016056	-	98	95.397	ENSCANG00000020991	FRG1	93	95.397	Colobus_angolensis_palliatus
ENSCAPG00000016056	-	92	97.778	ENSCGRG00001014998	Frg1	88	96.930	Cricetulus_griseus_chok1gshd
ENSCAPG00000016056	-	92	97.778	ENSCGRG00000011860	-	88	96.930	Cricetulus_griseus_crigri
ENSCAPG00000016056	-	92	77.333	ENSCGRG00000003902	-	83	76.754	Cricetulus_griseus_crigri
ENSCAPG00000016056	-	87	68.396	ENSCSEG00000015950	frg1	86	68.396	Cynoglossus_semilaevis
ENSCAPG00000016056	-	93	72.687	ENSCVAG00000009985	frg1	87	73.953	Cyprinodon_variegatus
ENSCAPG00000016056	-	90	76.923	ENSDARG00000056504	frg1	93	81.481	Danio_rerio
ENSCAPG00000016056	-	92	97.778	ENSDNOG00000014886	FRG1	88	96.930	Dasypus_novemcinctus
ENSCAPG00000016056	-	90	85.000	ENSDORG00000016190	Frg1	87	84.649	Dipodomys_ordii
ENSCAPG00000016056	-	87	51.628	FBgn0036964	FRG1	81	51.628	Drosophila_melanogaster
ENSCAPG00000016056	-	92	95.556	ENSETEG00000012349	-	88	94.737	Echinops_telfairi
ENSCAPG00000016056	-	51	62.903	ENSEBUG00000014053	frg1	67	62.903	Eptatretus_burgeri
ENSCAPG00000016056	-	60	52.703	ENSEBUG00000012359	FRG1	89	52.703	Eptatretus_burgeri
ENSCAPG00000016056	-	97	95.359	ENSEASG00005017497	FRG1	92	95.359	Equus_asinus_asinus
ENSCAPG00000016056	-	97	95.359	ENSECAG00000003122	FRG1	92	95.359	Equus_caballus
ENSCAPG00000016056	-	64	98.089	ENSEEUG00000000145	-	100	98.089	Erinaceus_europaeus
ENSCAPG00000016056	-	91	75.893	ENSELUG00000021712	frg1	87	75.893	Esox_lucius
ENSCAPG00000016056	-	98	96.653	ENSFCAG00000025737	FRG1	93	96.653	Felis_catus
ENSCAPG00000016056	-	91	86.099	ENSFALG00000011231	-	89	85.526	Ficedula_albicollis
ENSCAPG00000016056	-	97	97.468	ENSFDAG00000000962	-	92	97.468	Fukomys_damarensis
ENSCAPG00000016056	-	90	88.182	ENSFDAG00000012697	-	84	91.848	Fukomys_damarensis
ENSCAPG00000016056	-	91	72.197	ENSFHEG00000010540	frg1	87	72.197	Fundulus_heteroclitus
ENSCAPG00000016056	-	89	72.350	ENSGMOG00000000867	frg1	87	71.429	Gadus_morhua
ENSCAPG00000016056	-	92	86.222	ENSGALG00000013590	-	89	85.526	Gallus_gallus
ENSCAPG00000016056	-	73	69.663	ENSGAFG00000013855	frg1	86	69.444	Gambusia_affinis
ENSCAPG00000016056	-	91	73.094	ENSGACG00000016888	frg1	87	73.094	Gasterosteus_aculeatus
ENSCAPG00000016056	-	92	87.556	ENSGAGG00000025012	-	89	86.842	Gopherus_agassizii
ENSCAPG00000016056	-	92	62.222	ENSGGOG00000040796	-	86	61.842	Gorilla_gorilla
ENSCAPG00000016056	-	73	85.393	ENSGGOG00000012888	-	90	85.393	Gorilla_gorilla
ENSCAPG00000016056	-	91	73.094	ENSHBUG00000010667	frg1	88	72.558	Haplochromis_burtoni
ENSCAPG00000016056	-	89	93.151	ENSHGLG00000020943	-	88	92.511	Heterocephalus_glaber_female
ENSCAPG00000016056	-	89	94.521	ENSHGLG00000020402	-	83	93.833	Heterocephalus_glaber_female
ENSCAPG00000016056	-	89	83.562	ENSHGLG00000001211	-	90	82.456	Heterocephalus_glaber_female
ENSCAPG00000016056	-	97	97.468	ENSHGLG00000005601	FRG1	92	97.468	Heterocephalus_glaber_female
ENSCAPG00000016056	-	89	84.018	ENSHGLG00100010674	-	90	82.895	Heterocephalus_glaber_male
ENSCAPG00000016056	-	97	97.046	ENSHGLG00100016261	-	92	97.046	Heterocephalus_glaber_male
ENSCAPG00000016056	-	89	93.151	ENSHGLG00100021211	-	88	92.511	Heterocephalus_glaber_male
ENSCAPG00000016056	-	90	81.364	ENSHGLG00100015285	-	92	80.631	Heterocephalus_glaber_male
ENSCAPG00000016056	-	91	71.749	ENSHCOG00000000224	frg1	95	71.749	Hippocampus_comes
ENSCAPG00000016056	-	91	75.676	ENSIPUG00000022716	frg1	89	75.926	Ictalurus_punctatus
ENSCAPG00000016056	-	92	97.778	ENSSTOG00000002857	-	88	96.930	Ictidomys_tridecemlineatus
ENSCAPG00000016056	-	98	95.816	ENSJJAG00000020625	Frg1	93	95.816	Jaculus_jaculus
ENSCAPG00000016056	-	92	70.354	ENSKMAG00000005841	frg1	89	69.737	Kryptolebias_marmoratus
ENSCAPG00000016056	-	91	71.749	ENSLBEG00000001466	frg1	89	73.256	Labrus_bergylta
ENSCAPG00000016056	-	92	70.306	ENSLACG00000010243	frg1	89	69.828	Latimeria_chalumnae
ENSCAPG00000016056	-	91	77.232	ENSLOCG00000013868	frg1	93	75.314	Lepisosteus_oculatus
ENSCAPG00000016056	-	90	98.182	ENSLAFG00000011191	FRG1	88	96.930	Loxodonta_africana
ENSCAPG00000016056	-	98	95.397	ENSMFAG00000031178	FRG1	93	95.397	Macaca_fascicularis
ENSCAPG00000016056	-	87	87.442	ENSMFAG00000042873	-	89	87.442	Macaca_fascicularis
ENSCAPG00000016056	-	82	87.255	ENSMMUG00000047496	-	88	87.255	Macaca_mulatta
ENSCAPG00000016056	-	98	95.397	ENSMMUG00000001824	FRG1	93	98.122	Macaca_mulatta
ENSCAPG00000016056	-	87	91.121	ENSMNEG00000018620	FRG1	87	90.594	Macaca_nemestrina
ENSCAPG00000016056	-	98	95.397	ENSMLEG00000028881	FRG1	93	95.397	Mandrillus_leucophaeus
ENSCAPG00000016056	-	91	74.439	ENSMAMG00000012406	frg1	87	74.439	Mastacembelus_armatus
ENSCAPG00000016056	-	91	72.646	ENSMZEG00005007549	frg1	88	72.093	Maylandia_zebra
ENSCAPG00000016056	-	92	86.667	ENSMGAG00000011481	-	89	85.965	Meleagris_gallopavo
ENSCAPG00000016056	-	92	97.778	ENSMAUG00000000847	Frg1	88	96.930	Mesocricetus_auratus
ENSCAPG00000016056	-	98	96.234	ENSMICG00000046816	FRG1	93	96.234	Microcebus_murinus
ENSCAPG00000016056	-	92	88.889	ENSMOCG00000023000	Frg1	88	88.158	Microtus_ochrogaster
ENSCAPG00000016056	-	91	70.852	ENSMMOG00000004008	frg1	94	70.852	Mola_mola
ENSCAPG00000016056	-	90	92.727	ENSMODG00000019031	-	77	92.105	Monodelphis_domestica
ENSCAPG00000016056	-	91	74.888	ENSMALG00000018497	frg1	87	74.888	Monopterus_albus
ENSCAPG00000016056	-	92	97.333	MGP_CAROLIEiJ_G0031006	Frg1	88	96.491	Mus_caroli
ENSCAPG00000016056	-	92	97.333	ENSMUSG00000031590	Frg1	88	96.491	Mus_musculus
ENSCAPG00000016056	-	92	96.889	MGP_PahariEiJ_G0021475	Frg1	88	96.053	Mus_pahari
ENSCAPG00000016056	-	92	96.889	MGP_SPRETEiJ_G0032120	Frg1	88	96.053	Mus_spretus
ENSCAPG00000016056	-	98	96.653	ENSMPUG00000017962	FRG1	93	96.653	Mustela_putorius_furo
ENSCAPG00000016056	-	97	95.359	ENSMLUG00000023179	FRG1	92	95.359	Myotis_lucifugus
ENSCAPG00000016056	-	98	95.397	ENSNGAG00000016411	Frg1	93	95.397	Nannospalax_galili
ENSCAPG00000016056	-	68	74.850	ENSNBRG00000006806	frg1	78	74.850	Neolamprologus_brichardi
ENSCAPG00000016056	-	99	65.873	ENSNLEG00000032846	-	100	90.179	Nomascus_leucogenys
ENSCAPG00000016056	-	91	82.379	ENSNLEG00000035849	-	84	86.076	Nomascus_leucogenys
ENSCAPG00000016056	-	82	87.129	ENSNLEG00000036059	-	86	87.129	Nomascus_leucogenys
ENSCAPG00000016056	-	82	86.139	ENSNLEG00000028874	-	91	86.139	Nomascus_leucogenys
ENSCAPG00000016056	-	91	80.973	ENSNLEG00000032333	-	87	80.973	Nomascus_leucogenys
ENSCAPG00000016056	-	92	97.778	ENSNLEG00000000930	FRG1	89	96.930	Nomascus_leucogenys
ENSCAPG00000016056	-	62	93.421	ENSMEUG00000007509	-	59	93.421	Notamacropus_eugenii
ENSCAPG00000016056	-	92	83.111	ENSOPRG00000004722	-	89	82.456	Ochotona_princeps
ENSCAPG00000016056	-	90	80.455	ENSODEG00000006953	-	96	80.455	Octodon_degus
ENSCAPG00000016056	-	97	98.312	ENSODEG00000006458	-	92	98.312	Octodon_degus
ENSCAPG00000016056	-	91	72.768	ENSONIG00000010162	frg1	87	72.768	Oreochromis_niloticus
ENSCAPG00000016056	-	70	91.813	ENSOANG00000005659	-	76	91.813	Ornithorhynchus_anatinus
ENSCAPG00000016056	-	98	96.653	ENSOCUG00000009038	-	93	96.653	Oryctolagus_cuniculus
ENSCAPG00000016056	-	87	71.226	ENSORLG00000008106	frg1	77	71.226	Oryzias_latipes
ENSCAPG00000016056	-	91	71.749	ENSORLG00020014355	frg1	87	71.749	Oryzias_latipes_hni
ENSCAPG00000016056	-	91	71.749	ENSORLG00015014159	frg1	87	71.749	Oryzias_latipes_hsok
ENSCAPG00000016056	-	74	72.527	ENSOMEG00000002468	frg1	75	72.527	Oryzias_melastigma
ENSCAPG00000016056	-	98	95.397	ENSOGAG00000005749	-	93	95.397	Otolemur_garnettii
ENSCAPG00000016056	-	90	95.964	ENSOARG00000008592	FRG1	88	95.238	Ovis_aries
ENSCAPG00000016056	-	75	96.721	ENSPPAG00000043170	-	94	100.000	Pan_paniscus
ENSCAPG00000016056	-	91	69.397	ENSPPAG00000043174	-	85	71.300	Pan_paniscus
ENSCAPG00000016056	-	98	96.234	ENSPPRG00000025003	-	93	96.234	Panthera_pardus
ENSCAPG00000016056	-	90	96.364	ENSPPRG00000019777	-	89	95.614	Panthera_pardus
ENSCAPG00000016056	-	98	95.816	ENSPTIG00000006588	-	93	95.816	Panthera_tigris_altaica
ENSCAPG00000016056	-	90	96.818	ENSPTIG00000006566	-	89	96.053	Panthera_tigris_altaica
ENSCAPG00000016056	-	98	95.816	ENSPTRG00000016671	-	93	95.816	Pan_troglodytes
ENSCAPG00000016056	-	85	82.692	ENSPTRG00000052363	-	94	95.050	Pan_troglodytes
ENSCAPG00000016056	-	85	80.952	ENSPTRG00000044710	-	89	80.952	Pan_troglodytes
ENSCAPG00000016056	-	84	80.193	ENSPTRG00000043123	-	80	83.000	Pan_troglodytes
ENSCAPG00000016056	-	98	95.816	ENSPTRG00000050205	-	93	95.816	Pan_troglodytes
ENSCAPG00000016056	-	85	78.095	ENSPTRG00000050204	-	88	78.095	Pan_troglodytes
ENSCAPG00000016056	-	60	87.075	ENSPANG00000031530	-	69	86.000	Papio_anubis
ENSCAPG00000016056	-	91	72.197	ENSPKIG00000024189	frg1	87	72.197	Paramormyrops_kingsleyae
ENSCAPG00000016056	-	88	87.500	ENSPSIG00000017971	-	82	87.500	Pelodiscus_sinensis
ENSCAPG00000016056	-	86	71.905	ENSPMGG00000019273	frg1	87	71.905	Periophthalmus_magnuspinnatus
ENSCAPG00000016056	-	92	97.778	ENSPEMG00000000650	Frg1	88	96.930	Peromyscus_maniculatus_bairdii
ENSCAPG00000016056	-	92	90.708	ENSPCIG00000007530	-	61	90.351	Phascolarctos_cinereus
ENSCAPG00000016056	-	92	70.485	ENSPFOG00000006721	frg1	89	70.175	Poecilia_formosa
ENSCAPG00000016056	-	92	70.796	ENSPMEG00000013816	frg1	89	70.614	Poecilia_mexicana
ENSCAPG00000016056	-	92	69.912	ENSPREG00000000097	frg1	89	69.737	Poecilia_reticulata
ENSCAPG00000016056	-	64	91.139	ENSPPYG00000011275	-	87	91.139	Pongo_abelii
ENSCAPG00000016056	-	59	96.552	ENSPPYG00000029810	-	100	96.552	Pongo_abelii
ENSCAPG00000016056	-	88	92.593	ENSPCAG00000014953	-	88	92.593	Procavia_capensis
ENSCAPG00000016056	-	90	62.727	ENSPCOG00000022726	FRG1	83	63.158	Propithecus_coquereli
ENSCAPG00000016056	-	98	79.916	ENSPVAG00000010551	FRG1	93	79.916	Pteropus_vampyrus
ENSCAPG00000016056	-	70	74.269	ENSPNYG00000015209	frg1	74	74.269	Pundamilia_nyererei
ENSCAPG00000016056	-	87	78.037	ENSPNAG00000013259	frg1	88	78.037	Pygocentrus_nattereri
ENSCAPG00000016056	-	92	95.556	ENSRNOG00000009846	Frg1	88	94.737	Rattus_norvegicus
ENSCAPG00000016056	-	78	96.875	ENSRBIG00000042219	-	82	95.897	Rhinopithecus_bieti
ENSCAPG00000016056	-	87	90.610	ENSRROG00000032084	-	94	89.423	Rhinopithecus_roxellana
ENSCAPG00000016056	-	98	92.050	ENSRROG00000015523	FRG1	92	92.050	Rhinopithecus_roxellana
ENSCAPG00000016056	-	98	95.417	ENSSBOG00000034175	FRG1	93	95.417	Saimiri_boliviensis_boliviensis
ENSCAPG00000016056	-	89	92.694	ENSSHAG00000005886	-	88	91.228	Sarcophilus_harrisii
ENSCAPG00000016056	-	91	74.107	ENSSFOG00015021361	frg1	86	73.148	Scleropages_formosus
ENSCAPG00000016056	-	91	71.749	ENSSMAG00000001213	frg1	87	71.749	Scophthalmus_maximus
ENSCAPG00000016056	-	91	73.094	ENSSDUG00000018886	frg1	87	73.094	Seriola_dumerili
ENSCAPG00000016056	-	91	72.197	ENSSLDG00000024191	frg1	87	72.197	Seriola_lalandi_dorsalis
ENSCAPG00000016056	-	70	95.322	ENSSARG00000002471	-	95	94.413	Sorex_araneus
ENSCAPG00000016056	-	88	85.648	ENSSPUG00000017326	-	85	85.648	Sphenodon_punctatus
ENSCAPG00000016056	-	88	73.953	ENSSPAG00000013294	frg1	86	73.953	Stegastes_partitus
ENSCAPG00000016056	-	98	96.234	ENSSSCG00000006996	FRG1	93	96.234	Sus_scrofa
ENSCAPG00000016056	-	50	91.057	ENSTGUG00000016714	-	100	91.057	Taeniopygia_guttata
ENSCAPG00000016056	-	91	85.714	ENSTGUG00000007028	-	89	85.088	Taeniopygia_guttata
ENSCAPG00000016056	-	91	73.094	ENSTRUG00000016208	frg1	87	73.094	Takifugu_rubripes
ENSCAPG00000016056	-	91	73.094	ENSTNIG00000007128	frg1	87	73.094	Tetraodon_nigroviridis
ENSCAPG00000016056	-	92	96.444	ENSTBEG00000014491	-	88	95.614	Tupaia_belangeri
ENSCAPG00000016056	-	81	61.809	ENSTBEG00000017605	-	99	61.809	Tupaia_belangeri
ENSCAPG00000016056	-	87	68.075	ENSTBEG00000012789	-	100	68.075	Tupaia_belangeri
ENSCAPG00000016056	-	98	96.234	ENSTTRG00000003429	FRG1	93	96.234	Tursiops_truncatus
ENSCAPG00000016056	-	84	98.049	ENSUAMG00000012123	-	86	98.049	Ursus_americanus
ENSCAPG00000016056	-	98	96.653	ENSUMAG00000021119	FRG1	93	96.653	Ursus_maritimus
ENSCAPG00000016056	-	96	97.021	ENSVPAG00000011977	-	99	97.021	Vicugna_pacos
ENSCAPG00000016056	-	98	93.305	ENSVPAG00000000616	FRG1	92	93.305	Vicugna_pacos
ENSCAPG00000016056	-	97	92.017	ENSVVUG00000007181	-	81	92.017	Vulpes_vulpes
ENSCAPG00000016056	-	92	80.444	ENSXETG00000012470	frg1	89	79.825	Xenopus_tropicalis
ENSCAPG00000016056	-	87	71.028	ENSXCOG00000005312	frg1	85	71.028	Xiphophorus_couchianus
ENSCAPG00000016056	-	93	69.604	ENSXMAG00000007751	frg1	89	69.737	Xiphophorus_maculatus