EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000016225 (Gene tree)
Gene ID: -
Gene Symbol: PRPF19
Alias: NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 4698 bases
Position: chrAVPZ01000622.1:9204677-9209374
Accession: 17896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016320	Prp19	PF08606.11	3.6e-33	1	1
ENSCAPP00000016328	Prp19	PF08606.11	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020119	PRPF19-202	1521	-	ENSCAPP00000016328	506 (aa)	-	-
ENSCAPT00000020111	PRPF19-201	1500	-	ENSCAPP00000016320	499 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000016225	PRPF19	57	36.000	ENSCAPG00000016762	TBL3	53	36.000
ENSCAPG00000016225	PRPF19	55	31.500	ENSCAPG00000015652	POC1B	61	31.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016225	PRPF19	100	98.998	ENSG00000110107	PRPF19	100	100.000	Homo_sapiens
ENSCAPG00000016225	PRPF19	100	86.200	ENSAPOG00000017823	prpf19	100	85.776	Acanthochromis_polyacanthus
ENSCAPG00000016225	PRPF19	100	98.780	ENSAMEG00000007375	PRPF19	98	98.780	Ailuropoda_melanoleuca
ENSCAPG00000016225	PRPF19	99	85.714	ENSACIG00000015876	prpf19	98	85.714	Amphilophus_citrinellus
ENSCAPG00000016225	PRPF19	100	86.200	ENSAOCG00000020444	prpf19	99	86.200	Amphiprion_ocellaris
ENSCAPG00000016225	PRPF19	100	86.200	ENSAPEG00000016076	prpf19	99	86.200	Amphiprion_percula
ENSCAPG00000016225	PRPF19	100	86.200	ENSATEG00000008840	prpf19	99	86.200	Anabas_testudineus
ENSCAPG00000016225	PRPF19	100	97.395	ENSACAG00000017797	PRPF19	99	97.395	Anolis_carolinensis
ENSCAPG00000016225	PRPF19	100	98.597	ENSANAG00000021762	PRPF19	99	98.597	Aotus_nancymaae
ENSCAPG00000016225	PRPF19	100	85.400	ENSACLG00000009416	prpf19	100	84.914	Astatotilapia_calliptera
ENSCAPG00000016225	PRPF19	100	86.000	ENSAMXG00000011547	prpf19	99	86.000	Astyanax_mexicanus
ENSCAPG00000016225	PRPF19	100	99.198	ENSBTAG00000014366	PRPF19	99	99.198	Bos_taurus
ENSCAPG00000016225	PRPF19	100	51.497	WBGene00020423	prp-19	99	51.497	Caenorhabditis_elegans
ENSCAPG00000016225	PRPF19	100	98.798	ENSCJAG00000016509	PRPF19	99	98.798	Callithrix_jacchus
ENSCAPG00000016225	PRPF19	100	98.798	ENSCAFG00000016438	PRPF19	97	98.798	Canis_familiaris
ENSCAPG00000016225	PRPF19	100	98.798	ENSCAFG00020012565	PRPF19	99	98.798	Canis_lupus_dingo
ENSCAPG00000016225	PRPF19	100	99.198	ENSCHIG00000018281	PRPF19	99	99.198	Capra_hircus
ENSCAPG00000016225	PRPF19	100	98.798	ENSTSYG00000006860	PRPF19	99	98.798	Carlito_syrichta
ENSCAPG00000016225	PRPF19	100	100.000	ENSCPOG00000020688	PRPF19	99	100.000	Cavia_porcellus
ENSCAPG00000016225	PRPF19	100	98.798	ENSCCAG00000025839	PRPF19	99	98.798	Cebus_capucinus
ENSCAPG00000016225	PRPF19	100	98.998	ENSCATG00000041921	PRPF19	99	98.998	Cercocebus_atys
ENSCAPG00000016225	PRPF19	100	99.599	ENSCLAG00000003338	PRPF19	100	100.000	Chinchilla_lanigera
ENSCAPG00000016225	PRPF19	100	98.998	ENSCSAG00000006254	PRPF19	99	98.998	Chlorocebus_sabaeus
ENSCAPG00000016225	PRPF19	61	86.601	ENSCHOG00000005840	PRPF19	98	86.601	Choloepus_hoffmanni
ENSCAPG00000016225	PRPF19	100	97.002	ENSCPBG00000027061	PRPF19	99	96.994	Chrysemys_picta_bellii
ENSCAPG00000016225	PRPF19	99	68.349	ENSCING00000016625	-	99	68.349	Ciona_intestinalis
ENSCAPG00000016225	PRPF19	100	68.563	ENSCSAVG00000002027	-	99	67.936	Ciona_savignyi
ENSCAPG00000016225	PRPF19	100	98.693	ENSCANG00000027155	PRPF19	99	45.873	Colobus_angolensis_palliatus
ENSCAPG00000016225	PRPF19	100	99.198	ENSCGRG00001002699	Prpf19	99	99.598	Cricetulus_griseus_chok1gshd
ENSCAPG00000016225	PRPF19	99	99.598	ENSCGRG00000008964	Prpf19	99	99.598	Cricetulus_griseus_crigri
ENSCAPG00000016225	PRPF19	100	85.200	ENSCSEG00000010411	prpf19	99	85.200	Cynoglossus_semilaevis
ENSCAPG00000016225	PRPF19	100	84.600	ENSCVAG00000012011	prpf19	99	85.000	Cyprinodon_variegatus
ENSCAPG00000016225	PRPF19	100	85.600	ENSDARG00000015239	prpf19	99	85.600	Danio_rerio
ENSCAPG00000016225	PRPF19	100	98.798	ENSDNOG00000005797	PRPF19	99	98.798	Dasypus_novemcinctus
ENSCAPG00000016225	PRPF19	100	99.198	ENSDORG00000006906	Prpf19	99	99.198	Dipodomys_ordii
ENSCAPG00000016225	PRPF19	100	66.139	FBgn0261119	Prp19	99	66.139	Drosophila_melanogaster
ENSCAPG00000016225	PRPF19	100	86.172	ENSETEG00000012295	PRPF19	99	86.172	Echinops_telfairi
ENSCAPG00000016225	PRPF19	84	77.143	ENSEBUG00000013075	prpf19	100	77.143	Eptatretus_burgeri
ENSCAPG00000016225	PRPF19	100	98.726	ENSEASG00005008056	PRPF19	97	98.726	Equus_asinus_asinus
ENSCAPG00000016225	PRPF19	100	98.998	ENSECAG00000007322	PRPF19	99	98.998	Equus_caballus
ENSCAPG00000016225	PRPF19	100	84.800	ENSELUG00000020276	-	99	84.800	Esox_lucius
ENSCAPG00000016225	PRPF19	100	78.758	ENSELUG00000004578	prpf19	99	78.758	Esox_lucius
ENSCAPG00000016225	PRPF19	100	98.798	ENSFCAG00000013668	PRPF19	99	98.798	Felis_catus
ENSCAPG00000016225	PRPF19	100	96.794	ENSFALG00000012084	PRPF19	99	96.794	Ficedula_albicollis
ENSCAPG00000016225	PRPF19	85	99.763	ENSFDAG00000009420	PRPF19	96	99.764	Fukomys_damarensis
ENSCAPG00000016225	PRPF19	100	85.000	ENSFHEG00000022135	prpf19	99	85.000	Fundulus_heteroclitus
ENSCAPG00000016225	PRPF19	100	86.400	ENSGMOG00000014756	prpf19	99	86.400	Gadus_morhua
ENSCAPG00000016225	PRPF19	100	96.794	ENSGALG00000036530	PRPF19	99	96.794	Gallus_gallus
ENSCAPG00000016225	PRPF19	100	84.400	ENSGAFG00000008931	prpf19	99	84.400	Gambusia_affinis
ENSCAPG00000016225	PRPF19	100	85.200	ENSGACG00000017976	prpf19	99	85.200	Gasterosteus_aculeatus
ENSCAPG00000016225	PRPF19	100	97.595	ENSGAGG00000013328	PRPF19	99	97.194	Gopherus_agassizii
ENSCAPG00000016225	PRPF19	100	98.998	ENSGGOG00000008648	PRPF19	99	98.998	Gorilla_gorilla
ENSCAPG00000016225	PRPF19	100	85.400	ENSHBUG00000008394	prpf19	99	85.400	Haplochromis_burtoni
ENSCAPG00000016225	PRPF19	100	99.198	ENSHGLG00000003934	PRPF19	99	99.198	Heterocephalus_glaber_female
ENSCAPG00000016225	PRPF19	99	80.907	ENSHGLG00100010649	PRPF19	100	80.885	Heterocephalus_glaber_male
ENSCAPG00000016225	PRPF19	100	84.000	ENSHCOG00000016720	prpf19	99	84.000	Hippocampus_comes
ENSCAPG00000016225	PRPF19	100	86.000	ENSIPUG00000013084	prpf19	99	86.000	Ictalurus_punctatus
ENSCAPG00000016225	PRPF19	100	98.798	ENSSTOG00000001598	PRPF19	99	98.798	Ictidomys_tridecemlineatus
ENSCAPG00000016225	PRPF19	100	98.998	ENSJJAG00000020609	Prpf19	99	98.998	Jaculus_jaculus
ENSCAPG00000016225	PRPF19	100	85.400	ENSKMAG00000010257	prpf19	99	85.400	Kryptolebias_marmoratus
ENSCAPG00000016225	PRPF19	100	85.600	ENSLBEG00000027436	prpf19	99	85.600	Labrus_bergylta
ENSCAPG00000016225	PRPF19	100	89.980	ENSLACG00000003434	PRPF19	99	89.980	Latimeria_chalumnae
ENSCAPG00000016225	PRPF19	92	74.414	ENSLOCG00000008123	prpf19	100	74.414	Lepisosteus_oculatus
ENSCAPG00000016225	PRPF19	100	96.304	ENSLAFG00000002644	PRPF19	99	96.304	Loxodonta_africana
ENSCAPG00000016225	PRPF19	100	98.998	ENSMFAG00000036743	PRPF19	99	98.998	Macaca_fascicularis
ENSCAPG00000016225	PRPF19	100	98.998	ENSMMUG00000014530	PRPF19	99	98.998	Macaca_mulatta
ENSCAPG00000016225	PRPF19	100	98.998	ENSMNEG00000044485	PRPF19	99	98.998	Macaca_nemestrina
ENSCAPG00000016225	PRPF19	100	98.998	ENSMLEG00000043312	PRPF19	99	98.998	Mandrillus_leucophaeus
ENSCAPG00000016225	PRPF19	100	85.600	ENSMAMG00000006843	prpf19	100	85.345	Mastacembelus_armatus
ENSCAPG00000016225	PRPF19	100	85.400	ENSMZEG00005013356	prpf19	99	85.400	Maylandia_zebra
ENSCAPG00000016225	PRPF19	99	90.180	ENSMGAG00000003180	PRPF19	100	90.180	Meleagris_gallopavo
ENSCAPG00000016225	PRPF19	99	99.598	ENSMAUG00000012585	Prpf19	99	99.598	Mesocricetus_auratus
ENSCAPG00000016225	PRPF19	100	98.998	ENSMICG00000011236	PRPF19	99	98.998	Microcebus_murinus
ENSCAPG00000016225	PRPF19	100	99.198	ENSMOCG00000010383	Prpf19	99	99.198	Microtus_ochrogaster
ENSCAPG00000016225	PRPF19	100	85.170	ENSMMOG00000003138	prpf19	99	85.170	Mola_mola
ENSCAPG00000016225	PRPF19	100	98.597	ENSMODG00000020338	PRPF19	99	98.597	Monodelphis_domestica
ENSCAPG00000016225	PRPF19	100	77.800	ENSMALG00000010981	prpf19	99	77.800	Monopterus_albus
ENSCAPG00000016225	PRPF19	100	99.198	MGP_CAROLIEiJ_G0022704	Prpf19	99	99.198	Mus_caroli
ENSCAPG00000016225	PRPF19	100	99.198	ENSMUSG00000024735	Prpf19	99	99.198	Mus_musculus
ENSCAPG00000016225	PRPF19	100	99.198	MGP_PahariEiJ_G0014198	Prpf19	99	99.198	Mus_pahari
ENSCAPG00000016225	PRPF19	100	99.198	MGP_SPRETEiJ_G0023618	Prpf19	99	99.198	Mus_spretus
ENSCAPG00000016225	PRPF19	100	98.798	ENSMPUG00000014432	PRPF19	99	98.798	Mustela_putorius_furo
ENSCAPG00000016225	PRPF19	100	95.117	ENSMLUG00000017597	PRPF19	99	95.117	Myotis_lucifugus
ENSCAPG00000016225	PRPF19	100	98.597	ENSNGAG00000012671	Prpf19	99	98.996	Nannospalax_galili
ENSCAPG00000016225	PRPF19	100	85.400	ENSNBRG00000000055	prpf19	99	85.400	Neolamprologus_brichardi
ENSCAPG00000016225	PRPF19	100	98.998	ENSNLEG00000013618	PRPF19	99	98.998	Nomascus_leucogenys
ENSCAPG00000016225	PRPF19	99	95.372	ENSOPRG00000008630	PRPF19	100	95.372	Ochotona_princeps
ENSCAPG00000016225	PRPF19	100	98.998	ENSODEG00000004043	PRPF19	99	98.998	Octodon_degus
ENSCAPG00000016225	PRPF19	100	85.400	ENSONIG00000004880	prpf19	99	85.400	Oreochromis_niloticus
ENSCAPG00000016225	PRPF19	100	95.946	ENSOCUG00000015689	PRPF19	99	95.946	Oryctolagus_cuniculus
ENSCAPG00000016225	PRPF19	100	85.200	ENSORLG00000004666	prpf19	99	85.200	Oryzias_latipes
ENSCAPG00000016225	PRPF19	100	85.200	ENSORLG00020013561	prpf19	99	85.200	Oryzias_latipes_hni
ENSCAPG00000016225	PRPF19	100	85.200	ENSORLG00015022196	prpf19	99	85.200	Oryzias_latipes_hsok
ENSCAPG00000016225	PRPF19	100	84.400	ENSOMEG00000004424	prpf19	99	84.677	Oryzias_melastigma
ENSCAPG00000016225	PRPF19	100	98.798	ENSOGAG00000016756	PRPF19	99	98.798	Otolemur_garnettii
ENSCAPG00000016225	PRPF19	100	99.198	ENSOARG00000015596	PRPF19	99	99.198	Ovis_aries
ENSCAPG00000016225	PRPF19	99	97.619	ENSPPAG00000030246	PRPF19	99	97.619	Pan_paniscus
ENSCAPG00000016225	PRPF19	100	98.798	ENSPPRG00000002470	PRPF19	99	98.798	Panthera_pardus
ENSCAPG00000016225	PRPF19	99	99.195	ENSPTIG00000006541	PRPF19	99	99.195	Panthera_tigris_altaica
ENSCAPG00000016225	PRPF19	100	98.998	ENSPTRG00000003724	PRPF19	99	98.998	Pan_troglodytes
ENSCAPG00000016225	PRPF19	100	98.998	ENSPANG00000002762	PRPF19	99	98.998	Papio_anubis
ENSCAPG00000016225	PRPF19	100	85.200	ENSPKIG00000019715	prpf19	99	85.200	Paramormyrops_kingsleyae
ENSCAPG00000016225	PRPF19	84	97.136	ENSPSIG00000007497	PRPF19	100	97.136	Pelodiscus_sinensis
ENSCAPG00000016225	PRPF19	100	85.170	ENSPMGG00000017527	prpf19	99	85.170	Periophthalmus_magnuspinnatus
ENSCAPG00000016225	PRPF19	99	99.396	ENSPEMG00000019270	Prpf19	99	99.396	Peromyscus_maniculatus_bairdii
ENSCAPG00000016225	PRPF19	100	98.715	ENSPCIG00000003485	PRPF19	79	98.715	Phascolarctos_cinereus
ENSCAPG00000016225	PRPF19	100	84.400	ENSPFOG00000002558	prpf19	99	84.400	Poecilia_formosa
ENSCAPG00000016225	PRPF19	100	84.400	ENSPLAG00000017942	prpf19	99	84.400	Poecilia_latipinna
ENSCAPG00000016225	PRPF19	100	84.400	ENSPMEG00000008638	prpf19	99	84.400	Poecilia_mexicana
ENSCAPG00000016225	PRPF19	100	86.437	ENSPREG00000002489	prpf19	95	86.437	Poecilia_reticulata
ENSCAPG00000016225	PRPF19	100	97.500	ENSPPYG00000003202	PRPF19	91	97.500	Pongo_abelii
ENSCAPG00000016225	PRPF19	100	98.397	ENSPCAG00000001930	PRPF19	99	98.397	Procavia_capensis
ENSCAPG00000016225	PRPF19	100	99.143	ENSPCOG00000014017	PRPF19	99	99.143	Propithecus_coquereli
ENSCAPG00000016225	PRPF19	100	98.998	ENSPVAG00000014669	PRPF19	99	98.998	Pteropus_vampyrus
ENSCAPG00000016225	PRPF19	100	85.400	ENSPNYG00000000859	prpf19	99	85.400	Pundamilia_nyererei
ENSCAPG00000016225	PRPF19	100	86.400	ENSPNAG00000019245	prpf19	99	86.400	Pygocentrus_nattereri
ENSCAPG00000016225	PRPF19	100	99.198	ENSRNOG00000020897	Prpf19	99	99.198	Rattus_norvegicus
ENSCAPG00000016225	PRPF19	100	98.998	ENSRBIG00000036672	PRPF19	99	98.998	Rhinopithecus_bieti
ENSCAPG00000016225	PRPF19	100	98.998	ENSRROG00000041572	PRPF19	99	98.998	Rhinopithecus_roxellana
ENSCAPG00000016225	PRPF19	100	98.798	ENSSBOG00000022840	PRPF19	99	98.798	Saimiri_boliviensis_boliviensis
ENSCAPG00000016225	PRPF19	100	98.597	ENSSHAG00000009462	PRPF19	99	98.597	Sarcophilus_harrisii
ENSCAPG00000016225	PRPF19	100	83.166	ENSSFOG00015001236	prpf19	99	83.166	Scleropages_formosus
ENSCAPG00000016225	PRPF19	100	86.000	ENSSMAG00000002273	prpf19	99	86.000	Scophthalmus_maximus
ENSCAPG00000016225	PRPF19	100	85.800	ENSSDUG00000003299	prpf19	99	85.800	Seriola_dumerili
ENSCAPG00000016225	PRPF19	100	85.800	ENSSLDG00000003019	prpf19	99	85.800	Seriola_lalandi_dorsalis
ENSCAPG00000016225	PRPF19	100	96.393	ENSSPUG00000019328	PRPF19	99	96.393	Sphenodon_punctatus
ENSCAPG00000016225	PRPF19	100	86.000	ENSSPAG00000008546	prpf19	99	86.000	Stegastes_partitus
ENSCAPG00000016225	PRPF19	100	98.998	ENSSSCG00000013107	PRPF19	99	98.998	Sus_scrofa
ENSCAPG00000016225	PRPF19	100	96.794	ENSTGUG00000006319	PRPF19	99	96.794	Taeniopygia_guttata
ENSCAPG00000016225	PRPF19	100	84.600	ENSTRUG00000008502	prpf19	99	84.600	Takifugu_rubripes
ENSCAPG00000016225	PRPF19	100	80.466	ENSTNIG00000014219	prpf19	98	66.996	Tetraodon_nigroviridis
ENSCAPG00000016225	PRPF19	100	98.798	ENSTTRG00000012476	PRPF19	99	98.798	Tursiops_truncatus
ENSCAPG00000016225	PRPF19	100	98.798	ENSUAMG00000011280	PRPF19	99	98.798	Ursus_americanus
ENSCAPG00000016225	PRPF19	85	98.815	ENSUMAG00000011609	PRPF19	83	98.815	Ursus_maritimus
ENSCAPG00000016225	PRPF19	99	99.119	ENSVPAG00000010516	PRPF19	100	99.119	Vicugna_pacos
ENSCAPG00000016225	PRPF19	100	98.798	ENSVVUG00000005291	PRPF19	99	98.798	Vulpes_vulpes
ENSCAPG00000016225	PRPF19	99	85.450	ENSXETG00000011938	prpf19	99	85.450	Xenopus_tropicalis
ENSCAPG00000016225	PRPF19	100	84.400	ENSXCOG00000003141	prpf19	99	84.400	Xiphophorus_couchianus
ENSCAPG00000016225	PRPF19	100	84.600	ENSXMAG00000008485	prpf19	99	84.600	Xiphophorus_maculatus