EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016234 (Gene tree)
Gene ID: -
Gene Symbol: KARS
Alias: DFNB89|KARS1|KARS2
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 13839 bases
Position: chrAVPZ01000145.1:1721484-1735322
Accession: 6215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016343	tRNA_anti-codon	PF01336.25	8.8e-15	1	1
ENSCAPP00000016340	tRNA_anti-codon	PF01336.25	9.9e-15	1	1
ENSCAPP00000016343	tRNA-synt_2	PF00152.20	2.9e-62	1	2
ENSCAPP00000016343	tRNA-synt_2	PF00152.20	2.9e-62	2	2
ENSCAPP00000016340	tRNA-synt_2	PF00152.20	3.4e-62	1	2
ENSCAPP00000016340	tRNA-synt_2	PF00152.20	3.4e-62	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020131	KARS-201	1791	-	ENSCAPP00000016340	596 (aa)	-	-
ENSCAPT00000020134	KARS-202	1707	-	ENSCAPP00000016343	568 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016234	KARS	100	86.880	ENSG00000065427	KARS	100	97.059	Homo_sapiens
ENSCAPG00000016234	KARS	96	73.380	ENSAPOG00000010997	kars	98	73.124	Acanthochromis_polyacanthus
ENSCAPG00000016234	KARS	100	86.080	ENSAMEG00000005347	KARS	100	87.040	Ailuropoda_melanoleuca
ENSCAPG00000016234	KARS	96	68.881	ENSACIG00000000304	kars	98	68.990	Amphilophus_citrinellus
ENSCAPG00000016234	KARS	96	74.431	ENSAOCG00000012971	kars	95	74.771	Amphiprion_ocellaris
ENSCAPG00000016234	KARS	96	74.256	ENSAPEG00000011144	kars	98	73.997	Amphiprion_percula
ENSCAPG00000016234	KARS	96	73.030	ENSATEG00000004954	kars	98	72.775	Anabas_testudineus
ENSCAPG00000016234	KARS	90	78.731	ENSAPLG00000012705	KARS	97	78.771	Anas_platyrhynchos
ENSCAPG00000016234	KARS	96	75.699	ENSACAG00000007577	KARS	90	75.436	Anolis_carolinensis
ENSCAPG00000016234	KARS	100	87.520	ENSANAG00000030403	-	100	87.520	Aotus_nancymaae
ENSCAPG00000016234	KARS	96	73.150	ENSANAG00000031739	-	99	73.199	Aotus_nancymaae
ENSCAPG00000016234	KARS	96	73.905	ENSACLG00000001613	kars	98	72.635	Astatotilapia_calliptera
ENSCAPG00000016234	KARS	99	72.128	ENSAMXG00000030719	kars	98	73.730	Astyanax_mexicanus
ENSCAPG00000016234	KARS	98	87.136	ENSBTAG00000015677	KARS	75	87.136	Bos_taurus
ENSCAPG00000016234	KARS	95	54.417	WBGene00002238	kars-1	99	57.760	Caenorhabditis_elegans
ENSCAPG00000016234	KARS	100	86.880	ENSCJAG00000014213	KARS	100	87.680	Callithrix_jacchus
ENSCAPG00000016234	KARS	100	85.920	ENSCAFG00000020069	KARS	100	86.880	Canis_familiaris
ENSCAPG00000016234	KARS	100	85.920	ENSCAFG00020001721	KARS	100	86.880	Canis_lupus_dingo
ENSCAPG00000016234	KARS	99	83.838	ENSCHIG00000016073	-	99	83.838	Capra_hircus
ENSCAPG00000016234	KARS	100	87.500	ENSCHIG00000014108	-	100	87.500	Capra_hircus
ENSCAPG00000016234	KARS	100	87.660	ENSTSYG00000001643	KARS	100	87.660	Carlito_syrichta
ENSCAPG00000016234	KARS	100	93.740	ENSCPOG00000012036	KARS	100	93.740	Cavia_porcellus
ENSCAPG00000016234	KARS	89	70.810	ENSCCAG00000030337	-	100	69.424	Cebus_capucinus
ENSCAPG00000016234	KARS	100	87.040	ENSCCAG00000034307	-	100	88.000	Cebus_capucinus
ENSCAPG00000016234	KARS	99	86.634	ENSCATG00000038129	KARS	99	86.634	Cercocebus_atys
ENSCAPG00000016234	KARS	100	89.744	ENSCLAG00000007905	KARS	100	89.744	Chinchilla_lanigera
ENSCAPG00000016234	KARS	100	86.720	ENSCSAG00000003664	KARS	100	86.720	Chlorocebus_sabaeus
ENSCAPG00000016234	KARS	82	87.366	ENSCHOG00000013447	KARS	82	87.366	Choloepus_hoffmanni
ENSCAPG00000016234	KARS	87	67.370	ENSCPBG00000002553	-	95	67.370	Chrysemys_picta_bellii
ENSCAPG00000016234	KARS	96	79.685	ENSCPBG00000026969	KARS	100	76.575	Chrysemys_picta_bellii
ENSCAPG00000016234	KARS	87	66.027	ENSCING00000009513	-	97	63.204	Ciona_intestinalis
ENSCAPG00000016234	KARS	51	62.382	ENSCSAVG00000001136	-	99	73.745	Ciona_savignyi
ENSCAPG00000016234	KARS	88	65.333	ENSCSAVG00000007684	-	100	61.765	Ciona_savignyi
ENSCAPG00000016234	KARS	100	83.200	ENSCANG00000032813	KARS	100	83.200	Colobus_angolensis_palliatus
ENSCAPG00000016234	KARS	100	87.540	ENSCGRG00001004055	KARS	100	87.540	Cricetulus_griseus_chok1gshd
ENSCAPG00000016234	KARS	100	87.540	ENSCGRG00000014242	KARS	100	87.540	Cricetulus_griseus_crigri
ENSCAPG00000016234	KARS	94	74.821	ENSCSEG00000008324	kars	98	73.913	Cynoglossus_semilaevis
ENSCAPG00000016234	KARS	94	73.703	ENSCVAG00000019686	kars	97	73.440	Cyprinodon_variegatus
ENSCAPG00000016234	KARS	96	76.007	ENSDARG00000103799	kars	100	79.058	Danio_rerio
ENSCAPG00000016234	KARS	100	87.840	ENSDNOG00000002241	KARS	100	88.320	Dasypus_novemcinctus
ENSCAPG00000016234	KARS	96	67.657	ENSDORG00000024214	-	97	68.166	Dipodomys_ordii
ENSCAPG00000016234	KARS	100	88.462	ENSDORG00000004780	-	100	88.462	Dipodomys_ordii
ENSCAPG00000016234	KARS	98	60.877	FBgn0027084	LysRS	98	64.789	Drosophila_melanogaster
ENSCAPG00000016234	KARS	100	85.144	ENSETEG00000008353	KARS	100	85.144	Echinops_telfairi
ENSCAPG00000016234	KARS	96	66.376	ENSEBUG00000001284	-	97	66.376	Eptatretus_burgeri
ENSCAPG00000016234	KARS	100	88.498	ENSEASG00005013497	KARS	100	88.498	Equus_asinus_asinus
ENSCAPG00000016234	KARS	98	88.889	ENSECAG00000013424	KARS	98	88.889	Equus_caballus
ENSCAPG00000016234	KARS	97	80.263	ENSEEUG00000007042	KARS	100	79.167	Erinaceus_europaeus
ENSCAPG00000016234	KARS	98	71.705	ENSELUG00000014575	kars	99	72.056	Esox_lucius
ENSCAPG00000016234	KARS	98	88.052	ENSFCAG00000008573	KARS	100	88.320	Felis_catus
ENSCAPG00000016234	KARS	96	77.526	ENSFALG00000002543	KARS	97	77.257	Ficedula_albicollis
ENSCAPG00000016234	KARS	100	88.782	ENSFDAG00000007155	KARS	100	89.744	Fukomys_damarensis
ENSCAPG00000016234	KARS	97	70.579	ENSFHEG00000006172	kars	99	72.917	Fundulus_heteroclitus
ENSCAPG00000016234	KARS	96	72.125	ENSGMOG00000002633	kars	99	68.174	Gadus_morhua
ENSCAPG00000016234	KARS	96	78.634	ENSGALG00000000907	KARS	99	78.634	Gallus_gallus
ENSCAPG00000016234	KARS	96	74.035	ENSGAFG00000017252	kars	98	73.776	Gambusia_affinis
ENSCAPG00000016234	KARS	99	69.737	ENSGACG00000015749	kars	98	69.737	Gasterosteus_aculeatus
ENSCAPG00000016234	KARS	87	69.231	ENSGAGG00000011960	-	98	66.105	Gopherus_agassizii
ENSCAPG00000016234	KARS	96	79.335	ENSGAGG00000023836	KARS	99	77.196	Gopherus_agassizii
ENSCAPG00000016234	KARS	100	86.720	ENSGGOG00000005515	KARS	100	87.680	Gorilla_gorilla
ENSCAPG00000016234	KARS	96	73.905	ENSHBUG00000013619	kars	98	72.635	Haplochromis_burtoni
ENSCAPG00000016234	KARS	100	89.263	ENSHGLG00000011898	KARS	100	89.601	Heterocephalus_glaber_female
ENSCAPG00000016234	KARS	96	79.514	ENSHGLG00000015235	-	97	80.556	Heterocephalus_glaber_female
ENSCAPG00000016234	KARS	99	71.714	ENSHGLG00000001298	-	99	71.714	Heterocephalus_glaber_female
ENSCAPG00000016234	KARS	96	79.514	ENSHGLG00100012523	-	97	80.556	Heterocephalus_glaber_male
ENSCAPG00000016234	KARS	99	71.547	ENSHGLG00100006466	-	99	71.547	Heterocephalus_glaber_male
ENSCAPG00000016234	KARS	100	89.263	ENSHGLG00100012264	KARS	100	89.263	Heterocephalus_glaber_male
ENSCAPG00000016234	KARS	96	73.380	ENSHCOG00000002900	kars	94	73.380	Hippocampus_comes
ENSCAPG00000016234	KARS	96	73.205	ENSIPUG00000009862	kars	98	73.205	Ictalurus_punctatus
ENSCAPG00000016234	KARS	100	88.160	ENSSTOG00000004205	KARS	100	88.960	Ictidomys_tridecemlineatus
ENSCAPG00000016234	KARS	100	86.560	ENSJJAG00000020406	Kars	100	87.520	Jaculus_jaculus
ENSCAPG00000016234	KARS	95	74.468	ENSKMAG00000006434	kars	97	74.468	Kryptolebias_marmoratus
ENSCAPG00000016234	KARS	96	73.030	ENSLBEG00000026537	kars	99	69.579	Labrus_bergylta
ENSCAPG00000016234	KARS	84	68.972	ENSLACG00000016399	-	99	68.972	Latimeria_chalumnae
ENSCAPG00000016234	KARS	100	74.400	ENSLACG00000006667	KARS	100	74.880	Latimeria_chalumnae
ENSCAPG00000016234	KARS	96	75.131	ENSLOCG00000004002	kars	97	75.131	Lepisosteus_oculatus
ENSCAPG00000016234	KARS	88	65.019	ENSLOCG00000013608	-	95	65.019	Lepisosteus_oculatus
ENSCAPG00000016234	KARS	100	86.880	ENSLAFG00000015340	KARS	100	86.880	Loxodonta_africana
ENSCAPG00000016234	KARS	100	86.400	ENSMFAG00000040024	KARS	100	86.400	Macaca_fascicularis
ENSCAPG00000016234	KARS	82	84.818	ENSMNEG00000035832	-	95	84.818	Macaca_nemestrina
ENSCAPG00000016234	KARS	100	85.280	ENSMNEG00000042879	-	100	85.280	Macaca_nemestrina
ENSCAPG00000016234	KARS	100	86.560	ENSMLEG00000034947	KARS	100	86.560	Mandrillus_leucophaeus
ENSCAPG00000016234	KARS	96	74.081	ENSMAMG00000021559	kars	99	70.227	Mastacembelus_armatus
ENSCAPG00000016234	KARS	96	73.905	ENSMZEG00005014382	kars	98	72.635	Maylandia_zebra
ENSCAPG00000016234	KARS	96	75.387	ENSMGAG00000009000	KARS	97	78.899	Meleagris_gallopavo
ENSCAPG00000016234	KARS	100	87.680	ENSMICG00000011997	KARS	100	87.680	Microcebus_murinus
ENSCAPG00000016234	KARS	99	88.691	ENSMOCG00000011829	Kars	99	88.691	Microtus_ochrogaster
ENSCAPG00000016234	KARS	98	84.786	ENSMOCG00000019029	-	98	84.786	Microtus_ochrogaster
ENSCAPG00000016234	KARS	96	74.081	ENSMMOG00000016934	kars	100	74.081	Mola_mola
ENSCAPG00000016234	KARS	95	82.777	ENSMODG00000002215	-	99	82.807	Monodelphis_domestica
ENSCAPG00000016234	KARS	99	75.850	ENSMODG00000002238	-	99	75.723	Monodelphis_domestica
ENSCAPG00000016234	KARS	96	73.380	ENSMALG00000020858	kars	98	73.124	Monopterus_albus
ENSCAPG00000016234	KARS	86	86.364	MGP_CAROLIEiJ_G0031588	Kars	96	90.476	Mus_caroli
ENSCAPG00000016234	KARS	100	86.538	ENSMUSG00000031948	Kars	100	86.538	Mus_musculus
ENSCAPG00000016234	KARS	96	87.130	MGP_PahariEiJ_G0023186	Kars	97	87.130	Mus_pahari
ENSCAPG00000016234	KARS	100	86.538	MGP_SPRETEiJ_G0032706	Kars	100	86.538	Mus_spretus
ENSCAPG00000016234	KARS	100	86.880	ENSMPUG00000009871	KARS	100	87.680	Mustela_putorius_furo
ENSCAPG00000016234	KARS	77	51.309	ENSMLUG00000026871	-	95	51.042	Myotis_lucifugus
ENSCAPG00000016234	KARS	100	87.520	ENSMLUG00000015119	-	100	87.520	Myotis_lucifugus
ENSCAPG00000016234	KARS	98	87.692	ENSNGAG00000018820	-	98	87.692	Nannospalax_galili
ENSCAPG00000016234	KARS	93	87.523	ENSNGAG00000022944	-	95	87.523	Nannospalax_galili
ENSCAPG00000016234	KARS	96	73.730	ENSNBRG00000011098	kars	98	72.466	Neolamprologus_brichardi
ENSCAPG00000016234	KARS	100	86.400	ENSNLEG00000013072	KARS	100	87.360	Nomascus_leucogenys
ENSCAPG00000016234	KARS	99	77.597	ENSMEUG00000008684	KARS	99	77.597	Notamacropus_eugenii
ENSCAPG00000016234	KARS	97	87.007	ENSOPRG00000012544	KARS	99	87.007	Ochotona_princeps
ENSCAPG00000016234	KARS	100	88.622	ENSODEG00000013099	-	100	88.622	Octodon_degus
ENSCAPG00000016234	KARS	96	65.608	ENSODEG00000009464	-	100	65.378	Octodon_degus
ENSCAPG00000016234	KARS	96	74.256	ENSONIG00000005937	kars	100	72.973	Oreochromis_niloticus
ENSCAPG00000016234	KARS	100	81.008	ENSOANG00000008179	KARS	99	81.008	Ornithorhynchus_anatinus
ENSCAPG00000016234	KARS	98	79.010	ENSOCUG00000015553	KARS	98	79.693	Oryctolagus_cuniculus
ENSCAPG00000016234	KARS	96	72.112	ENSORLG00000007627	kars	99	72.112	Oryzias_latipes
ENSCAPG00000016234	KARS	94	75.357	ENSORLG00020010056	kars	99	71.947	Oryzias_latipes_hni
ENSCAPG00000016234	KARS	96	71.947	ENSORLG00015008179	kars	99	71.947	Oryzias_latipes_hsok
ENSCAPG00000016234	KARS	97	71.382	ENSOMEG00000001710	kars	96	75.536	Oryzias_melastigma
ENSCAPG00000016234	KARS	100	81.600	ENSOGAG00000005903	KARS	100	81.600	Otolemur_garnettii
ENSCAPG00000016234	KARS	89	87.127	ENSOARG00000006928	KARS	94	87.127	Ovis_aries
ENSCAPG00000016234	KARS	100	86.560	ENSPPAG00000036192	KARS	100	87.520	Pan_paniscus
ENSCAPG00000016234	KARS	100	86.880	ENSPPRG00000003027	KARS	100	87.840	Panthera_pardus
ENSCAPG00000016234	KARS	100	87.200	ENSPTIG00000008011	KARS	100	88.160	Panthera_tigris_altaica
ENSCAPG00000016234	KARS	100	86.880	ENSPTRG00000008364	KARS	100	87.840	Pan_troglodytes
ENSCAPG00000016234	KARS	100	86.720	ENSPANG00000024106	KARS	100	86.720	Papio_anubis
ENSCAPG00000016234	KARS	99	69.565	ENSPKIG00000009896	kars	98	73.647	Paramormyrops_kingsleyae
ENSCAPG00000016234	KARS	93	80.072	ENSPSIG00000009294	KARS	96	79.928	Pelodiscus_sinensis
ENSCAPG00000016234	KARS	88	67.358	ENSPSIG00000003041	-	97	67.358	Pelodiscus_sinensis
ENSCAPG00000016234	KARS	88	76.091	ENSPMGG00000006117	kars	100	73.860	Periophthalmus_magnuspinnatus
ENSCAPG00000016234	KARS	100	88.000	ENSPEMG00000012277	Kars	100	88.000	Peromyscus_maniculatus_bairdii
ENSCAPG00000016234	KARS	98	67.252	ENSPMAG00000008360	-	99	67.252	Petromyzon_marinus
ENSCAPG00000016234	KARS	94	85.868	ENSPCIG00000010761	-	94	85.868	Phascolarctos_cinereus
ENSCAPG00000016234	KARS	99	77.653	ENSPCIG00000025469	-	99	77.653	Phascolarctos_cinereus
ENSCAPG00000016234	KARS	95	73.982	ENSPFOG00000013253	kars	99	70.328	Poecilia_formosa
ENSCAPG00000016234	KARS	95	73.982	ENSPLAG00000004189	kars	97	73.982	Poecilia_latipinna
ENSCAPG00000016234	KARS	95	74.159	ENSPMEG00000015698	kars	97	74.159	Poecilia_mexicana
ENSCAPG00000016234	KARS	96	73.509	ENSPREG00000023179	kars	98	73.427	Poecilia_reticulata
ENSCAPG00000016234	KARS	100	87.040	ENSPPYG00000007567	KARS	100	88.000	Pongo_abelii
ENSCAPG00000016234	KARS	87	84.130	ENSPCAG00000010790	KARS	100	84.130	Procavia_capensis
ENSCAPG00000016234	KARS	100	78.720	ENSPCOG00000003166	KARS	100	78.720	Propithecus_coquereli
ENSCAPG00000016234	KARS	100	87.821	ENSPVAG00000006746	KARS	100	87.821	Pteropus_vampyrus
ENSCAPG00000016234	KARS	96	73.905	ENSPNYG00000013095	kars	98	72.635	Pundamilia_nyererei
ENSCAPG00000016234	KARS	99	73.480	ENSPNAG00000013828	kars	98	75.131	Pygocentrus_nattereri
ENSCAPG00000016234	KARS	100	85.783	ENSRNOG00000019456	Kars	100	86.581	Rattus_norvegicus
ENSCAPG00000016234	KARS	99	86.634	ENSRBIG00000030118	KARS	99	86.634	Rhinopithecus_bieti
ENSCAPG00000016234	KARS	100	86.880	ENSRROG00000041418	KARS	100	86.880	Rhinopithecus_roxellana
ENSCAPG00000016234	KARS	74	30.380	YNL073W	-	82	30.380	Saccharomyces_cerevisiae
ENSCAPG00000016234	KARS	96	51.282	YDR037W	KRS1	97	52.137	Saccharomyces_cerevisiae
ENSCAPG00000016234	KARS	100	86.880	ENSSBOG00000019255	KARS	99	88.870	Saimiri_boliviensis_boliviensis
ENSCAPG00000016234	KARS	93	70.652	ENSSHAG00000009005	-	99	70.652	Sarcophilus_harrisii
ENSCAPG00000016234	KARS	96	76.857	ENSSHAG00000001359	-	99	76.897	Sarcophilus_harrisii
ENSCAPG00000016234	KARS	99	67.203	ENSSHAG00000002050	-	99	67.203	Sarcophilus_harrisii
ENSCAPG00000016234	KARS	95	73.852	ENSSFOG00015014837	kars	100	73.852	Scleropages_formosus
ENSCAPG00000016234	KARS	96	73.730	ENSSMAG00000021441	kars	100	72.835	Scophthalmus_maximus
ENSCAPG00000016234	KARS	96	74.256	ENSSDUG00000001202	kars	98	73.997	Seriola_dumerili
ENSCAPG00000016234	KARS	96	74.256	ENSSLDG00000021220	kars	98	74.301	Seriola_lalandi_dorsalis
ENSCAPG00000016234	KARS	75	93.443	ENSSARG00000011493	KARS	79	93.443	Sorex_araneus
ENSCAPG00000016234	KARS	96	76.389	ENSSPUG00000004974	KARS	97	76.125	Sphenodon_punctatus
ENSCAPG00000016234	KARS	59	58.402	ENSSPUG00000000449	-	85	58.402	Sphenodon_punctatus
ENSCAPG00000016234	KARS	97	73.438	ENSSPAG00000020365	kars	97	73.438	Stegastes_partitus
ENSCAPG00000016234	KARS	100	87.040	ENSSSCG00000002704	KARS	100	88.000	Sus_scrofa
ENSCAPG00000016234	KARS	93	78.853	ENSTGUG00000008400	KARS	99	78.853	Taeniopygia_guttata
ENSCAPG00000016234	KARS	98	69.707	ENSTRUG00000017551	kars	99	69.707	Takifugu_rubripes
ENSCAPG00000016234	KARS	88	75.522	ENSTNIG00000009351	kars	97	73.484	Tetraodon_nigroviridis
ENSCAPG00000016234	KARS	96	72.917	ENSTBEG00000004610	KARS	100	72.917	Tupaia_belangeri
ENSCAPG00000016234	KARS	100	86.880	ENSTTRG00000001221	KARS	100	86.880	Tursiops_truncatus
ENSCAPG00000016234	KARS	100	86.240	ENSUAMG00000017557	KARS	100	87.200	Ursus_americanus
ENSCAPG00000016234	KARS	100	86.240	ENSUMAG00000014559	KARS	100	87.200	Ursus_maritimus
ENSCAPG00000016234	KARS	100	85.600	ENSVPAG00000003716	KARS	100	86.240	Vicugna_pacos
ENSCAPG00000016234	KARS	100	85.280	ENSVVUG00000024338	KARS	100	86.240	Vulpes_vulpes
ENSCAPG00000016234	KARS	96	74.476	ENSXETG00000003569	kars	100	71.154	Xenopus_tropicalis
ENSCAPG00000016234	KARS	95	73.721	ENSXCOG00000011313	kars	99	73.721	Xiphophorus_couchianus
ENSCAPG00000016234	KARS	96	73.860	ENSXMAG00000003191	kars	98	73.601	Xiphophorus_maculatus