EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016235 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 54974 bases
Position: chrAVPZ01000045.1:21599068-21654041
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016321	Exo_endo_phos	PF03372.23	1.4e-20	1	1
ENSCAPP00000016324	Exo_endo_phos	PF03372.23	2.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020115	APEX1-202	783	-	ENSCAPP00000016324	260 (aa)	-	-
ENSCAPT00000020112	APEX1-201	855	-	ENSCAPP00000016321	284 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016235	APEX1	91	97.458	ENSG00000100823	APEX1	85	88.561	Homo_sapiens
ENSCAPG00000016235	APEX1	91	69.492	ENSAPOG00000017002	apex1	87	63.504	Acanthochromis_polyacanthus
ENSCAPG00000016235	APEX1	91	98.305	ENSAMEG00000005418	APEX1	85	89.668	Ailuropoda_melanoleuca
ENSCAPG00000016235	APEX1	91	71.610	ENSACIG00000010653	apex1	97	63.448	Amphilophus_citrinellus
ENSCAPG00000016235	APEX1	91	69.492	ENSAOCG00000009649	apex1	93	61.724	Amphiprion_ocellaris
ENSCAPG00000016235	APEX1	91	69.492	ENSAPEG00000021453	apex1	93	61.724	Amphiprion_percula
ENSCAPG00000016235	APEX1	90	71.064	ENSATEG00000002883	apex1	90	63.322	Anabas_testudineus
ENSCAPG00000016235	APEX1	92	73.529	ENSACAG00000008099	APEX1	85	66.788	Anolis_carolinensis
ENSCAPG00000016235	APEX1	91	97.458	ENSANAG00000030117	APEX1	85	88.561	Aotus_nancymaae
ENSCAPG00000016235	APEX1	91	72.458	ENSACLG00000018441	apex1	87	66.058	Astatotilapia_calliptera
ENSCAPG00000016235	APEX1	91	70.339	ENSAMXG00000034699	apex1	86	63.636	Astyanax_mexicanus
ENSCAPG00000016235	APEX1	91	96.610	ENSBTAG00000002745	APEX1	85	88.192	Bos_taurus
ENSCAPG00000016235	APEX1	88	44.828	WBGene00001372	exo-3	87	43.359	Caenorhabditis_elegans
ENSCAPG00000016235	APEX1	91	97.881	ENSCJAG00000009726	APEX1	85	88.930	Callithrix_jacchus
ENSCAPG00000016235	APEX1	91	97.458	ENSCAFG00000032033	APEX1	85	88.930	Canis_familiaris
ENSCAPG00000016235	APEX1	91	97.458	ENSCAFG00020014377	-	85	88.930	Canis_lupus_dingo
ENSCAPG00000016235	APEX1	91	95.763	ENSCHIG00000007298	-	85	87.454	Capra_hircus
ENSCAPG00000016235	APEX1	91	77.966	ENSCHIG00000014537	-	87	70.652	Capra_hircus
ENSCAPG00000016235	APEX1	91	96.186	ENSTSYG00000034813	APEX1	85	87.085	Carlito_syrichta
ENSCAPG00000016235	APEX1	91	100.000	ENSCPOG00000030909	APEX1	85	90.775	Cavia_porcellus
ENSCAPG00000016235	APEX1	91	97.881	ENSCCAG00000033056	-	85	88.930	Cebus_capucinus
ENSCAPG00000016235	APEX1	92	82.427	ENSCCAG00000031931	-	77	82.427	Cebus_capucinus
ENSCAPG00000016235	APEX1	91	97.034	ENSCATG00000015580	APEX1	85	88.192	Cercocebus_atys
ENSCAPG00000016235	APEX1	91	97.458	ENSCLAG00000001002	APEX1	85	88.561	Chinchilla_lanigera
ENSCAPG00000016235	APEX1	91	96.610	ENSCSAG00000016670	-	85	87.823	Chlorocebus_sabaeus
ENSCAPG00000016235	APEX1	91	96.610	ENSCSAG00000016685	-	85	87.823	Chlorocebus_sabaeus
ENSCAPG00000016235	APEX1	91	74.153	ENSCPBG00000009567	APEX1	81	69.349	Chrysemys_picta_bellii
ENSCAPG00000016235	APEX1	92	58.403	ENSCING00000008137	-	80	56.471	Ciona_intestinalis
ENSCAPG00000016235	APEX1	92	51.681	ENSCSAVG00000007144	-	92	51.681	Ciona_savignyi
ENSCAPG00000016235	APEX1	91	97.458	ENSCANG00000030726	APEX1	85	88.561	Colobus_angolensis_palliatus
ENSCAPG00000016235	APEX1	99	86.973	ENSCGRG00001017046	Apex1	86	85.036	Cricetulus_griseus_chok1gshd
ENSCAPG00000016235	APEX1	99	86.973	ENSCGRG00000008984	Apex1	86	85.036	Cricetulus_griseus_crigri
ENSCAPG00000016235	APEX1	97	61.818	ENSCSEG00000017499	apex1	86	61.818	Cynoglossus_semilaevis
ENSCAPG00000016235	APEX1	91	71.610	ENSCVAG00000022075	apex1	87	65.091	Cyprinodon_variegatus
ENSCAPG00000016235	APEX1	91	70.763	ENSDARG00000045843	apex1	87	64.000	Danio_rerio
ENSCAPG00000016235	APEX1	91	90.678	ENSDNOG00000042234	APEX1	80	83.026	Dasypus_novemcinctus
ENSCAPG00000016235	APEX1	91	97.034	ENSDORG00000001616	Apex1	85	88.192	Dipodomys_ordii
ENSCAPG00000016235	APEX1	91	94.915	ENSETEG00000004855	-	85	86.347	Echinops_telfairi
ENSCAPG00000016235	APEX1	91	64.557	ENSEBUG00000000622	-	92	63.900	Eptatretus_burgeri
ENSCAPG00000016235	APEX1	91	97.881	ENSEASG00005017489	APEX1	55	97.881	Equus_asinus_asinus
ENSCAPG00000016235	APEX1	91	97.881	ENSECAG00000022325	APEX1	61	97.881	Equus_caballus
ENSCAPG00000016235	APEX1	87	93.805	ENSEEUG00000012569	APEX1	90	85.441	Erinaceus_europaeus
ENSCAPG00000016235	APEX1	91	69.492	ENSELUG00000021706	apex1	87	63.504	Esox_lucius
ENSCAPG00000016235	APEX1	91	97.881	ENSFCAG00000030869	APEX1	85	89.299	Felis_catus
ENSCAPG00000016235	APEX1	91	96.610	ENSFDAG00000006120	APEX1	85	87.823	Fukomys_damarensis
ENSCAPG00000016235	APEX1	91	72.881	ENSFHEG00000009031	apex1	70	68.321	Fundulus_heteroclitus
ENSCAPG00000016235	APEX1	91	66.525	ENSGMOG00000007943	apex1	82	62.934	Gadus_morhua
ENSCAPG00000016235	APEX1	91	72.034	ENSGAFG00000005311	apex1	93	63.793	Gambusia_affinis
ENSCAPG00000016235	APEX1	91	69.492	ENSGACG00000019497	apex1	96	65.637	Gasterosteus_aculeatus
ENSCAPG00000016235	APEX1	91	74.153	ENSGAGG00000014999	APEX1	81	69.349	Gopherus_agassizii
ENSCAPG00000016235	APEX1	91	97.458	ENSGGOG00000002128	APEX1	85	88.561	Gorilla_gorilla
ENSCAPG00000016235	APEX1	91	72.034	ENSHBUG00000005894	apex1	88	65.693	Haplochromis_burtoni
ENSCAPG00000016235	APEX1	91	98.305	ENSHGLG00000002848	APEX1	85	89.299	Heterocephalus_glaber_female
ENSCAPG00000016235	APEX1	91	98.305	ENSHGLG00100017878	APEX1	85	89.299	Heterocephalus_glaber_male
ENSCAPG00000016235	APEX1	91	70.763	ENSHCOG00000009961	apex1	86	64.000	Hippocampus_comes
ENSCAPG00000016235	APEX1	91	70.339	ENSIPUG00000005799	apex1	87	64.234	Ictalurus_punctatus
ENSCAPG00000016235	APEX1	91	96.610	ENSSTOG00000010096	APEX1	85	87.823	Ictidomys_tridecemlineatus
ENSCAPG00000016235	APEX1	91	96.186	ENSJJAG00000012067	-	85	87.823	Jaculus_jaculus
ENSCAPG00000016235	APEX1	91	83.051	ENSJJAG00000020465	-	86	76.384	Jaculus_jaculus
ENSCAPG00000016235	APEX1	91	86.017	ENSJJAG00000003660	-	85	78.598	Jaculus_jaculus
ENSCAPG00000016235	APEX1	91	70.763	ENSKMAG00000021171	apex1	85	64.234	Kryptolebias_marmoratus
ENSCAPG00000016235	APEX1	91	68.220	ENSLBEG00000010248	apex1	93	60.690	Labrus_bergylta
ENSCAPG00000016235	APEX1	91	70.339	ENSLACG00000008617	APEX1	80	67.843	Latimeria_chalumnae
ENSCAPG00000016235	APEX1	91	71.610	ENSLOCG00000015516	apex1	85	65.328	Lepisosteus_oculatus
ENSCAPG00000016235	APEX1	91	94.915	ENSLAFG00000021872	APEX1	85	86.347	Loxodonta_africana
ENSCAPG00000016235	APEX1	91	97.034	ENSMFAG00000002565	APEX1	85	88.192	Macaca_fascicularis
ENSCAPG00000016235	APEX1	91	97.034	ENSMMUG00000048039	APEX1	85	88.192	Macaca_mulatta
ENSCAPG00000016235	APEX1	91	97.034	ENSMNEG00000036944	APEX1	85	88.192	Macaca_nemestrina
ENSCAPG00000016235	APEX1	91	97.034	ENSMLEG00000042125	APEX1	85	88.192	Mandrillus_leucophaeus
ENSCAPG00000016235	APEX1	91	70.763	ENSMAMG00000023526	apex1	93	62.414	Mastacembelus_armatus
ENSCAPG00000016235	APEX1	91	72.458	ENSMZEG00005014187	apex1	87	66.058	Maylandia_zebra
ENSCAPG00000016235	APEX1	91	95.339	ENSMAUG00000013994	Apex1	86	86.131	Mesocricetus_auratus
ENSCAPG00000016235	APEX1	91	97.034	ENSMICG00000043554	APEX1	85	88.561	Microcebus_murinus
ENSCAPG00000016235	APEX1	91	94.915	ENSMOCG00000013721	Apex1	85	86.716	Microtus_ochrogaster
ENSCAPG00000016235	APEX1	91	67.373	ENSMMOG00000010031	apex1	90	61.034	Mola_mola
ENSCAPG00000016235	APEX1	91	90.254	ENSMODG00000007125	APEX1	84	82.288	Monodelphis_domestica
ENSCAPG00000016235	APEX1	91	62.712	ENSMALG00000011699	apex1	71	57.299	Monopterus_albus
ENSCAPG00000016235	APEX1	90	95.745	MGP_CAROLIEiJ_G0019209	Apex1	85	87.407	Mus_caroli
ENSCAPG00000016235	APEX1	91	97.034	ENSMUSG00000035960	Apex1	85	88.561	Mus_musculus
ENSCAPG00000016235	APEX1	91	96.610	MGP_PahariEiJ_G0030232	Apex1	85	88.192	Mus_pahari
ENSCAPG00000016235	APEX1	91	97.034	MGP_SPRETEiJ_G0020101	Apex1	85	88.561	Mus_spretus
ENSCAPG00000016235	APEX1	91	96.610	ENSMLUG00000028957	APEX1	84	88.192	Myotis_lucifugus
ENSCAPG00000016235	APEX1	76	76.650	ENSNGAG00000021748	-	68	70.130	Nannospalax_galili
ENSCAPG00000016235	APEX1	91	97.034	ENSNGAG00000002725	-	85	88.930	Nannospalax_galili
ENSCAPG00000016235	APEX1	91	72.034	ENSNBRG00000005334	apex1	80	65.693	Neolamprologus_brichardi
ENSCAPG00000016235	APEX1	91	97.458	ENSNLEG00000010839	APEX1	86	88.561	Nomascus_leucogenys
ENSCAPG00000016235	APEX1	91	91.102	ENSMEUG00000014519	APEX1	86	82.657	Notamacropus_eugenii
ENSCAPG00000016235	APEX1	91	95.339	ENSOPRG00000014029	APEX1	85	86.716	Ochotona_princeps
ENSCAPG00000016235	APEX1	99	70.930	ENSODEG00000006583	-	85	66.904	Octodon_degus
ENSCAPG00000016235	APEX1	91	98.729	ENSODEG00000001703	-	84	89.963	Octodon_degus
ENSCAPG00000016235	APEX1	88	82.251	ENSODEG00000004777	-	77	82.251	Octodon_degus
ENSCAPG00000016235	APEX1	91	72.458	ENSONIG00000012089	apex1	87	66.058	Oreochromis_niloticus
ENSCAPG00000016235	APEX1	91	85.169	ENSOANG00000008836	APEX1	59	85.169	Ornithorhynchus_anatinus
ENSCAPG00000016235	APEX1	91	96.186	ENSOCUG00000005022	APEX1	85	87.454	Oryctolagus_cuniculus
ENSCAPG00000016235	APEX1	91	71.186	ENSORLG00000012378	apex1	92	63.448	Oryzias_latipes
ENSCAPG00000016235	APEX1	91	71.186	ENSORLG00020021371	apex1	92	63.448	Oryzias_latipes_hni
ENSCAPG00000016235	APEX1	91	71.186	ENSORLG00015020089	apex1	92	63.448	Oryzias_latipes_hsok
ENSCAPG00000016235	APEX1	91	71.186	ENSOMEG00000018876	apex1	92	63.448	Oryzias_melastigma
ENSCAPG00000016235	APEX1	91	95.763	ENSOGAG00000013335	-	85	87.085	Otolemur_garnettii
ENSCAPG00000016235	APEX1	92	82.716	ENSOGAG00000029355	-	85	75.636	Otolemur_garnettii
ENSCAPG00000016235	APEX1	91	94.915	ENSOARG00000019740	-	85	86.716	Ovis_aries
ENSCAPG00000016235	APEX1	91	80.932	ENSOARG00000014424	-	86	74.170	Ovis_aries
ENSCAPG00000016235	APEX1	93	85.772	ENSOARG00000001876	-	84	83.142	Ovis_aries
ENSCAPG00000016235	APEX1	91	97.881	ENSPPAG00000038760	APEX1	86	88.930	Pan_paniscus
ENSCAPG00000016235	APEX1	91	97.881	ENSPPRG00000011794	APEX1	85	89.299	Panthera_pardus
ENSCAPG00000016235	APEX1	91	97.881	ENSPTIG00000014829	APEX1	85	89.299	Panthera_tigris_altaica
ENSCAPG00000016235	APEX1	91	97.881	ENSPTRG00000006093	APEX1	86	88.930	Pan_troglodytes
ENSCAPG00000016235	APEX1	91	97.034	ENSPANG00000022757	APEX1	85	88.192	Papio_anubis
ENSCAPG00000016235	APEX1	91	68.220	ENSPKIG00000003504	apex1	82	64.479	Paramormyrops_kingsleyae
ENSCAPG00000016235	APEX1	91	68.220	ENSPMGG00000016596	apex1	71	68.220	Periophthalmus_magnuspinnatus
ENSCAPG00000016235	APEX1	91	95.763	ENSPEMG00000019097	Apex1	85	87.454	Peromyscus_maniculatus_bairdii
ENSCAPG00000016235	APEX1	91	70.042	ENSPMAG00000007275	-	87	65.769	Petromyzon_marinus
ENSCAPG00000016235	APEX1	91	89.831	ENSPCIG00000023274	APEX1	84	81.550	Phascolarctos_cinereus
ENSCAPG00000016235	APEX1	91	72.458	ENSPFOG00000004178	apex1	93	64.138	Poecilia_formosa
ENSCAPG00000016235	APEX1	91	72.458	ENSPLAG00000012779	apex1	87	65.818	Poecilia_latipinna
ENSCAPG00000016235	APEX1	91	72.458	ENSPMEG00000019623	apex1	93	64.138	Poecilia_mexicana
ENSCAPG00000016235	APEX1	91	72.034	ENSPREG00000014298	apex1	87	65.818	Poecilia_reticulata
ENSCAPG00000016235	APEX1	91	97.034	ENSPPYG00000005565	APEX1	85	88.192	Pongo_abelii
ENSCAPG00000016235	APEX1	91	92.797	ENSPCAG00000010376	APEX1	85	84.133	Procavia_capensis
ENSCAPG00000016235	APEX1	91	97.458	ENSPCOG00000021564	APEX1	85	88.930	Propithecus_coquereli
ENSCAPG00000016235	APEX1	91	96.610	ENSPVAG00000010736	APEX1	84	88.192	Pteropus_vampyrus
ENSCAPG00000016235	APEX1	91	72.458	ENSPNYG00000023940	apex1	87	66.058	Pundamilia_nyererei
ENSCAPG00000016235	APEX1	82	69.484	ENSPNAG00000020897	apex1	82	62.151	Pygocentrus_nattereri
ENSCAPG00000016235	APEX1	91	96.186	ENSRNOG00000009663	Apex1	85	87.823	Rattus_norvegicus
ENSCAPG00000016235	APEX1	91	97.034	ENSRBIG00000038325	APEX1	84	88.192	Rhinopithecus_bieti
ENSCAPG00000016235	APEX1	91	97.881	ENSSBOG00000018921	-	85	88.930	Saimiri_boliviensis_boliviensis
ENSCAPG00000016235	APEX1	92	84.454	ENSSBOG00000031372	-	87	77.122	Saimiri_boliviensis_boliviensis
ENSCAPG00000016235	APEX1	91	90.254	ENSSHAG00000013524	APEX1	85	82.182	Sarcophilus_harrisii
ENSCAPG00000016235	APEX1	97	60.364	ENSSFOG00015001948	apex1	87	60.364	Scleropages_formosus
ENSCAPG00000016235	APEX1	91	69.068	ENSSMAG00000013348	apex1	91	61.379	Scophthalmus_maximus
ENSCAPG00000016235	APEX1	91	68.644	ENSSDUG00000016377	apex1	85	62.774	Seriola_dumerili
ENSCAPG00000016235	APEX1	91	69.492	ENSSLDG00000023005	apex1	85	63.504	Seriola_lalandi_dorsalis
ENSCAPG00000016235	APEX1	90	72.340	ENSSPUG00000000531	APEX1	91	65.934	Sphenodon_punctatus
ENSCAPG00000016235	APEX1	91	70.763	ENSSPAG00000000458	apex1	94	63.103	Stegastes_partitus
ENSCAPG00000016235	APEX1	91	60.744	ENSSSCG00000039705	-	79	60.744	Sus_scrofa
ENSCAPG00000016235	APEX1	91	97.458	ENSSSCG00000040060	-	85	88.930	Sus_scrofa
ENSCAPG00000016235	APEX1	91	59.746	ENSTGUG00000014378	APEX1	100	59.746	Taeniopygia_guttata
ENSCAPG00000016235	APEX1	91	67.797	ENSTRUG00000004268	apex1	87	60.345	Takifugu_rubripes
ENSCAPG00000016235	APEX1	91	67.797	ENSTNIG00000005778	apex1	86	62.409	Tetraodon_nigroviridis
ENSCAPG00000016235	APEX1	90	91.915	ENSTBEG00000006405	APEX1	84	83.764	Tupaia_belangeri
ENSCAPG00000016235	APEX1	91	95.339	ENSTTRG00000007860	APEX1	100	95.339	Tursiops_truncatus
ENSCAPG00000016235	APEX1	91	98.305	ENSUAMG00000010457	APEX1	85	89.668	Ursus_americanus
ENSCAPG00000016235	APEX1	91	98.305	ENSUMAG00000009178	APEX1	85	89.668	Ursus_maritimus
ENSCAPG00000016235	APEX1	91	90.678	ENSVPAG00000005083	APEX1	100	90.678	Vicugna_pacos
ENSCAPG00000016235	APEX1	91	97.034	ENSVVUG00000009010	APEX1	85	88.561	Vulpes_vulpes
ENSCAPG00000016235	APEX1	91	69.492	ENSXETG00000024773	apex1	86	63.504	Xenopus_tropicalis
ENSCAPG00000016235	APEX1	91	72.034	ENSXCOG00000015233	apex1	92	63.793	Xiphophorus_couchianus
ENSCAPG00000016235	APEX1	91	72.034	ENSXMAG00000006195	apex1	93	63.793	Xiphophorus_maculatus