EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016270 (Gene tree)
Gene ID: -
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 27753 bases
Position: chrAVPZ01000056.1:41326663-41354415
Accession: 19070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016381	efThoc1	PF11957.8	8.8e-69	1	2
ENSCAPP00000016381	efThoc1	PF11957.8	8.8e-69	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020173	THOC1-201	1728	-	ENSCAPP00000016381	575 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016270	THOC1	98	72.755	ENSG00000079134	THOC1	99	96.809	Homo_sapiens
ENSCAPG00000016270	THOC1	98	71.207	ENSAMEG00000006645	THOC1	97	71.207	Ailuropoda_melanoleuca
ENSCAPG00000016270	THOC1	97	48.518	ENSACIG00000019392	thoc1	94	51.974	Amphilophus_citrinellus
ENSCAPG00000016270	THOC1	97	57.143	ENSAOCG00000008391	thoc1	97	57.143	Amphiprion_ocellaris
ENSCAPG00000016270	THOC1	97	57.143	ENSAPEG00000001093	thoc1	97	52.100	Amphiprion_percula
ENSCAPG00000016270	THOC1	97	55.829	ENSATEG00000004783	thoc1	97	55.829	Anabas_testudineus
ENSCAPG00000016270	THOC1	98	68.624	ENSAPLG00000016149	THOC1	97	68.624	Anas_platyrhynchos
ENSCAPG00000016270	THOC1	99	68.558	ENSACAG00000008307	THOC1	96	67.127	Anolis_carolinensis
ENSCAPG00000016270	THOC1	98	85.714	ENSANAG00000033200	THOC1	87	85.714	Aotus_nancymaae
ENSCAPG00000016270	THOC1	97	53.810	ENSACLG00000016836	thoc1	97	53.810	Astatotilapia_calliptera
ENSCAPG00000016270	THOC1	93	53.333	ENSAMXG00000014708	thoc1	97	53.333	Astyanax_mexicanus
ENSCAPG00000016270	THOC1	98	71.495	ENSBTAG00000019215	THOC1	97	71.495	Bos_taurus
ENSCAPG00000016270	THOC1	99	86.134	ENSCJAG00000020450	THOC1	85	86.134	Callithrix_jacchus
ENSCAPG00000016270	THOC1	98	71.053	ENSCAFG00000018324	THOC1	97	71.053	Canis_familiaris
ENSCAPG00000016270	THOC1	98	71.053	ENSCAFG00020017894	THOC1	97	71.053	Canis_lupus_dingo
ENSCAPG00000016270	THOC1	98	71.495	ENSCHIG00000015399	THOC1	99	71.495	Capra_hircus
ENSCAPG00000016270	THOC1	98	72.274	ENSTSYG00000010585	THOC1	97	72.274	Carlito_syrichta
ENSCAPG00000016270	THOC1	99	73.118	ENSCPOG00000000959	THOC1	97	73.529	Cavia_porcellus
ENSCAPG00000016270	THOC1	98	70.588	ENSCCAG00000025766	THOC1	97	70.588	Cebus_capucinus
ENSCAPG00000016270	THOC1	98	72.344	ENSCATG00000028180	THOC1	99	79.272	Cercocebus_atys
ENSCAPG00000016270	THOC1	98	72.601	ENSCLAG00000009117	THOC1	100	72.601	Chinchilla_lanigera
ENSCAPG00000016270	THOC1	98	70.743	ENSCSAG00000017631	THOC1	97	70.743	Chlorocebus_sabaeus
ENSCAPG00000016270	THOC1	80	81.092	ENSCHOG00000010609	THOC1	72	81.092	Choloepus_hoffmanni
ENSCAPG00000016270	THOC1	98	71.053	ENSCPBG00000027558	THOC1	97	71.053	Chrysemys_picta_bellii
ENSCAPG00000016270	THOC1	69	33.470	ENSCING00000007663	-	96	33.470	Ciona_intestinalis
ENSCAPG00000016270	THOC1	93	34.810	ENSCSAVG00000010649	-	99	34.173	Ciona_savignyi
ENSCAPG00000016270	THOC1	98	72.188	ENSCANG00000034265	THOC1	98	78.693	Colobus_angolensis_palliatus
ENSCAPG00000016270	THOC1	98	70.561	ENSCGRG00001016464	Thoc1	97	70.561	Cricetulus_griseus_chok1gshd
ENSCAPG00000016270	THOC1	98	70.561	ENSCGRG00000010269	-	100	70.561	Cricetulus_griseus_crigri
ENSCAPG00000016270	THOC1	90	60.208	ENSCGRG00000003390	-	99	60.208	Cricetulus_griseus_crigri
ENSCAPG00000016270	THOC1	97	51.543	ENSCSEG00000012486	thoc1	99	51.030	Cynoglossus_semilaevis
ENSCAPG00000016270	THOC1	97	51.633	ENSCVAG00000020600	thoc1	97	51.633	Cyprinodon_variegatus
ENSCAPG00000016270	THOC1	97	54.147	ENSDARG00000088246	thoc1	97	54.147	Danio_rerio
ENSCAPG00000016270	THOC1	98	70.588	ENSDNOG00000019217	THOC1	97	70.588	Dasypus_novemcinctus
ENSCAPG00000016270	THOC1	98	66.355	ENSDORG00000008060	Thoc1	99	66.355	Dipodomys_ordii
ENSCAPG00000016270	THOC1	88	54.325	ENSETEG00000004165	THOC1	97	54.325	Echinops_telfairi
ENSCAPG00000016270	THOC1	92	47.619	ENSEBUG00000005998	thoc1	98	46.281	Eptatretus_burgeri
ENSCAPG00000016270	THOC1	98	71.053	ENSEASG00005002549	THOC1	93	71.053	Equus_asinus_asinus
ENSCAPG00000016270	THOC1	98	71.672	ENSECAG00000009267	THOC1	87	71.362	Equus_caballus
ENSCAPG00000016270	THOC1	80	69.430	ENSEEUG00000012214	-	75	69.430	Erinaceus_europaeus
ENSCAPG00000016270	THOC1	98	52.923	ENSELUG00000023277	thoc1	97	52.923	Esox_lucius
ENSCAPG00000016270	THOC1	98	71.963	ENSFCAG00000022454	THOC1	84	71.963	Felis_catus
ENSCAPG00000016270	THOC1	98	70.000	ENSFALG00000006205	THOC1	99	70.000	Ficedula_albicollis
ENSCAPG00000016270	THOC1	98	72.291	ENSFDAG00000006842	THOC1	99	72.136	Fukomys_damarensis
ENSCAPG00000016270	THOC1	97	55.993	ENSFHEG00000008841	thoc1	99	55.993	Fundulus_heteroclitus
ENSCAPG00000016270	THOC1	97	52.012	ENSGMOG00000011486	thoc1	97	52.012	Gadus_morhua
ENSCAPG00000016270	THOC1	98	79.079	ENSGALG00000014915	THOC1	87	79.079	Gallus_gallus
ENSCAPG00000016270	THOC1	97	55.665	ENSGAFG00000021464	thoc1	99	55.665	Gambusia_affinis
ENSCAPG00000016270	THOC1	98	52.000	ENSGACG00000017361	thoc1	92	62.644	Gasterosteus_aculeatus
ENSCAPG00000016270	THOC1	98	70.898	ENSGAGG00000021230	-	95	70.898	Gopherus_agassizii
ENSCAPG00000016270	THOC1	98	70.743	ENSGGOG00000003013	THOC1	97	70.743	Gorilla_gorilla
ENSCAPG00000016270	THOC1	97	51.944	ENSHBUG00000009096	thoc1	97	51.944	Haplochromis_burtoni
ENSCAPG00000016270	THOC1	98	71.207	ENSHGLG00000003712	-	97	71.207	Heterocephalus_glaber_female
ENSCAPG00000016270	THOC1	92	67.803	ENSHGLG00000009264	-	99	67.803	Heterocephalus_glaber_female
ENSCAPG00000016270	THOC1	92	66.477	ENSHGLG00100002225	-	98	69.444	Heterocephalus_glaber_male
ENSCAPG00000016270	THOC1	98	71.672	ENSHGLG00100003570	THOC1	97	71.672	Heterocephalus_glaber_male
ENSCAPG00000016270	THOC1	97	53.084	ENSIPUG00000005306	thoc1	98	52.922	Ictalurus_punctatus
ENSCAPG00000016270	THOC1	99	71.275	ENSSTOG00000006484	THOC1	98	71.275	Ictidomys_tridecemlineatus
ENSCAPG00000016270	THOC1	57	74.930	ENSJJAG00000014893	-	98	74.930	Jaculus_jaculus
ENSCAPG00000016270	THOC1	98	55.714	ENSKMAG00000003904	thoc1	95	55.714	Kryptolebias_marmoratus
ENSCAPG00000016270	THOC1	97	52.566	ENSLBEG00000020372	thoc1	95	52.566	Labrus_bergylta
ENSCAPG00000016270	THOC1	98	61.978	ENSLACG00000014869	THOC1	97	60.991	Latimeria_chalumnae
ENSCAPG00000016270	THOC1	97	58.190	ENSLOCG00000002097	thoc1	97	57.500	Lepisosteus_oculatus
ENSCAPG00000016270	THOC1	98	70.743	ENSLAFG00000009585	THOC1	97	70.743	Loxodonta_africana
ENSCAPG00000016270	THOC1	98	70.743	ENSMFAG00000041520	THOC1	97	70.743	Macaca_fascicularis
ENSCAPG00000016270	THOC1	98	70.743	ENSMMUG00000004662	THOC1	97	70.743	Macaca_mulatta
ENSCAPG00000016270	THOC1	98	70.743	ENSMNEG00000040177	THOC1	97	70.743	Macaca_nemestrina
ENSCAPG00000016270	THOC1	98	70.743	ENSMLEG00000034201	THOC1	97	70.743	Mandrillus_leucophaeus
ENSCAPG00000016270	THOC1	95	51.669	ENSMAMG00000016747	thoc1	99	51.669	Mastacembelus_armatus
ENSCAPG00000016270	THOC1	97	53.810	ENSMZEG00005024609	thoc1	97	53.810	Maylandia_zebra
ENSCAPG00000016270	THOC1	98	68.615	ENSMGAG00000009811	THOC1	100	68.615	Meleagris_gallopavo
ENSCAPG00000016270	THOC1	98	70.717	ENSMAUG00000010272	Thoc1	97	70.717	Mesocricetus_auratus
ENSCAPG00000016270	THOC1	98	71.053	ENSMICG00000027200	THOC1	97	71.651	Microcebus_murinus
ENSCAPG00000016270	THOC1	98	68.062	ENSMOCG00000014536	-	84	68.062	Microtus_ochrogaster
ENSCAPG00000016270	THOC1	98	62.921	ENSMOCG00000014924	-	94	62.921	Microtus_ochrogaster
ENSCAPG00000016270	THOC1	93	52.614	ENSMMOG00000011772	thoc1	100	52.614	Mola_mola
ENSCAPG00000016270	THOC1	98	67.381	ENSMODG00000021482	THOC1	97	67.534	Monodelphis_domestica
ENSCAPG00000016270	THOC1	97	51.863	ENSMALG00000021872	thoc1	98	55.537	Monopterus_albus
ENSCAPG00000016270	THOC1	98	70.561	MGP_CAROLIEiJ_G0021989	Thoc1	97	70.561	Mus_caroli
ENSCAPG00000016270	THOC1	98	70.717	ENSMUSG00000024287	Thoc1	100	77.859	Mus_musculus
ENSCAPG00000016270	THOC1	98	70.717	MGP_PahariEiJ_G0018726	Thoc1	97	70.717	Mus_pahari
ENSCAPG00000016270	THOC1	98	70.872	MGP_SPRETEiJ_G0022905	Thoc1	97	70.872	Mus_spretus
ENSCAPG00000016270	THOC1	98	71.207	ENSMPUG00000005448	THOC1	97	71.207	Mustela_putorius_furo
ENSCAPG00000016270	THOC1	87	60.309	ENSMLUG00000027965	-	96	60.137	Myotis_lucifugus
ENSCAPG00000016270	THOC1	57	70.317	ENSMLUG00000024912	-	87	70.317	Myotis_lucifugus
ENSCAPG00000016270	THOC1	98	72.118	ENSMLUG00000004090	-	97	72.118	Myotis_lucifugus
ENSCAPG00000016270	THOC1	98	70.743	ENSNGAG00000001401	-	97	70.743	Nannospalax_galili
ENSCAPG00000016270	THOC1	98	62.957	ENSNGAG00000008061	-	98	62.798	Nannospalax_galili
ENSCAPG00000016270	THOC1	97	51.491	ENSNBRG00000005991	thoc1	97	51.811	Neolamprologus_brichardi
ENSCAPG00000016270	THOC1	98	70.743	ENSNLEG00000006835	THOC1	97	70.743	Nomascus_leucogenys
ENSCAPG00000016270	THOC1	98	56.347	ENSMEUG00000009756	THOC1	99	56.347	Notamacropus_eugenii
ENSCAPG00000016270	THOC1	98	61.321	ENSOPRG00000001108	THOC1	97	61.321	Ochotona_princeps
ENSCAPG00000016270	THOC1	99	66.359	ENSODEG00000006623	THOC1	97	66.718	Octodon_degus
ENSCAPG00000016270	THOC1	98	51.846	ENSONIG00000009440	thoc1	97	51.846	Oreochromis_niloticus
ENSCAPG00000016270	THOC1	98	71.362	ENSOCUG00000011601	THOC1	97	71.362	Oryctolagus_cuniculus
ENSCAPG00000016270	THOC1	97	52.877	ENSORLG00000017629	thoc1	97	52.877	Oryzias_latipes
ENSCAPG00000016270	THOC1	97	56.230	ENSORLG00020007567	thoc1	97	52.877	Oryzias_latipes_hni
ENSCAPG00000016270	THOC1	97	51.788	ENSORLG00015007356	thoc1	97	51.788	Oryzias_latipes_hsok
ENSCAPG00000016270	THOC1	97	50.389	ENSOMEG00000008200	thoc1	97	51.166	Oryzias_melastigma
ENSCAPG00000016270	THOC1	98	71.518	ENSOGAG00000000470	THOC1	97	71.674	Otolemur_garnettii
ENSCAPG00000016270	THOC1	98	71.495	ENSOARG00000009238	THOC1	97	71.495	Ovis_aries
ENSCAPG00000016270	THOC1	98	70.743	ENSPPAG00000031812	THOC1	97	70.743	Pan_paniscus
ENSCAPG00000016270	THOC1	98	70.807	ENSPPRG00000023794	THOC1	99	79.213	Panthera_pardus
ENSCAPG00000016270	THOC1	98	70.807	ENSPTIG00000007469	THOC1	99	79.213	Panthera_tigris_altaica
ENSCAPG00000016270	THOC1	98	86.134	ENSPTRG00000009816	THOC1	87	86.134	Pan_troglodytes
ENSCAPG00000016270	THOC1	98	86.134	ENSPANG00000008665	THOC1	87	86.134	Papio_anubis
ENSCAPG00000016270	THOC1	97	54.419	ENSPKIG00000005906	thoc1	97	55.194	Paramormyrops_kingsleyae
ENSCAPG00000016270	THOC1	83	73.849	ENSPSIG00000007691	THOC1	99	73.849	Pelodiscus_sinensis
ENSCAPG00000016270	THOC1	93	64.516	ENSPMGG00000008279	thoc1	95	52.562	Periophthalmus_magnuspinnatus
ENSCAPG00000016270	THOC1	98	70.717	ENSPEMG00000021789	Thoc1	97	70.717	Peromyscus_maniculatus_bairdii
ENSCAPG00000016270	THOC1	74	96.296	ENSPCIG00000026942	THOC1	84	96.296	Phascolarctos_cinereus
ENSCAPG00000016270	THOC1	97	50.779	ENSPFOG00000011673	thoc1	97	50.779	Poecilia_formosa
ENSCAPG00000016270	THOC1	97	50.855	ENSPLAG00000019648	thoc1	97	50.855	Poecilia_latipinna
ENSCAPG00000016270	THOC1	97	50.779	ENSPMEG00000007083	thoc1	97	50.779	Poecilia_mexicana
ENSCAPG00000016270	THOC1	97	50.700	ENSPREG00000006719	thoc1	97	50.700	Poecilia_reticulata
ENSCAPG00000016270	THOC1	57	80.403	ENSPPYG00000009049	-	70	80.403	Pongo_abelii
ENSCAPG00000016270	THOC1	98	64.907	ENSPCAG00000005320	THOC1	97	64.596	Procavia_capensis
ENSCAPG00000016270	THOC1	98	75.155	ENSPCOG00000009234	THOC1	97	75.155	Propithecus_coquereli
ENSCAPG00000016270	THOC1	98	76.424	ENSPVAG00000004007	THOC1	97	76.424	Pteropus_vampyrus
ENSCAPG00000016270	THOC1	97	51.944	ENSPNYG00000019152	thoc1	97	51.944	Pundamilia_nyererei
ENSCAPG00000016270	THOC1	97	55.538	ENSPNAG00000023390	thoc1	97	55.538	Pygocentrus_nattereri
ENSCAPG00000016270	THOC1	90	66.854	ENSRNOG00000015332	Thoc1	96	66.854	Rattus_norvegicus
ENSCAPG00000016270	THOC1	98	86.134	ENSRBIG00000033738	THOC1	87	86.134	Rhinopithecus_bieti
ENSCAPG00000016270	THOC1	98	72.642	ENSRROG00000044988	THOC1	98	78.693	Rhinopithecus_roxellana
ENSCAPG00000016270	THOC1	98	70.588	ENSSBOG00000016556	THOC1	97	70.588	Saimiri_boliviensis_boliviensis
ENSCAPG00000016270	THOC1	98	82.427	ENSSHAG00000014829	THOC1	88	82.427	Sarcophilus_harrisii
ENSCAPG00000016270	THOC1	98	55.860	ENSSFOG00015021527	thoc1	99	55.860	Scleropages_formosus
ENSCAPG00000016270	THOC1	93	52.342	ENSSMAG00000018465	thoc1	94	52.504	Scophthalmus_maximus
ENSCAPG00000016270	THOC1	97	53.605	ENSSDUG00000016810	thoc1	97	53.605	Seriola_dumerili
ENSCAPG00000016270	THOC1	97	56.672	ENSSLDG00000015555	thoc1	97	53.292	Seriola_lalandi_dorsalis
ENSCAPG00000016270	THOC1	85	72.245	ENSSARG00000006910	THOC1	85	72.245	Sorex_araneus
ENSCAPG00000016270	THOC1	98	69.194	ENSSPUG00000007238	THOC1	97	69.194	Sphenodon_punctatus
ENSCAPG00000016270	THOC1	93	53.289	ENSSPAG00000018847	thoc1	93	53.289	Stegastes_partitus
ENSCAPG00000016270	THOC1	98	77.036	ENSSSCG00000025653	THOC1	91	77.036	Sus_scrofa
ENSCAPG00000016270	THOC1	98	70.433	ENSTGUG00000010204	THOC1	97	70.433	Taeniopygia_guttata
ENSCAPG00000016270	THOC1	97	52.877	ENSTRUG00000013518	thoc1	97	52.877	Takifugu_rubripes
ENSCAPG00000016270	THOC1	97	52.411	ENSTNIG00000008473	thoc1	97	52.411	Tetraodon_nigroviridis
ENSCAPG00000016270	THOC1	98	72.344	ENSTBEG00000016920	THOC1	97	72.344	Tupaia_belangeri
ENSCAPG00000016270	THOC1	98	73.292	ENSTTRG00000016664	THOC1	97	73.292	Tursiops_truncatus
ENSCAPG00000016270	THOC1	99	73.879	ENSUAMG00000002527	THOC1	97	74.426	Ursus_americanus
ENSCAPG00000016270	THOC1	98	71.053	ENSUMAG00000019693	THOC1	97	71.053	Ursus_maritimus
ENSCAPG00000016270	THOC1	73	88.083	ENSVPAG00000003726	-	66	88.083	Vicugna_pacos
ENSCAPG00000016270	THOC1	98	71.053	ENSVVUG00000004384	THOC1	97	71.053	Vulpes_vulpes
ENSCAPG00000016270	THOC1	98	60.278	ENSXETG00000003155	thoc1	95	60.278	Xenopus_tropicalis
ENSCAPG00000016270	THOC1	93	56.314	ENSXCOG00000016085	thoc1	89	56.314	Xiphophorus_couchianus
ENSCAPG00000016270	THOC1	97	54.976	ENSXMAG00000002353	thoc1	97	54.660	Xiphophorus_maculatus