EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016273 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 12909 bases
Position: chrAVPZ01000256.1:4811178-4824086
Accession: 13244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016366	MA3	PF02847.17	5.1e-24	1	1
ENSCAPP00000016366	MIF4G	PF02854.19	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020158	NOM1-201	1569	-	ENSCAPP00000016366	522 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016273's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016273	NOM1	100	85.468	ENSG00000146909	NOM1	61	85.468	Homo_sapiens
ENSCAPG00000016273	NOM1	99	69.290	ENSAPOG00000012073	nom1	61	69.290	Acanthochromis_polyacanthus
ENSCAPG00000016273	NOM1	100	78.967	ENSAMEG00000001412	NOM1	72	78.967	Ailuropoda_melanoleuca
ENSCAPG00000016273	NOM1	99	69.981	ENSACIG00000018050	nom1	67	69.981	Amphilophus_citrinellus
ENSCAPG00000016273	NOM1	99	68.330	ENSAOCG00000006229	nom1	61	68.330	Amphiprion_ocellaris
ENSCAPG00000016273	NOM1	99	68.138	ENSAPEG00000015994	nom1	61	68.138	Amphiprion_percula
ENSCAPG00000016273	NOM1	99	68.451	ENSATEG00000005405	nom1	64	68.451	Anabas_testudineus
ENSCAPG00000016273	NOM1	99	71.538	ENSAPLG00000006585	NOM1	79	71.538	Anas_platyrhynchos
ENSCAPG00000016273	NOM1	99	72.115	ENSACAG00000011192	NOM1	61	72.115	Anolis_carolinensis
ENSCAPG00000016273	NOM1	99	69.098	ENSACLG00000000033	nom1	62	69.098	Astatotilapia_calliptera
ENSCAPG00000016273	NOM1	99	66.411	ENSAMXG00000041486	nom1	60	66.157	Astyanax_mexicanus
ENSCAPG00000016273	NOM1	100	79.159	ENSBTAG00000016435	NOM1	61	79.159	Bos_taurus
ENSCAPG00000016273	NOM1	100	84.512	ENSCJAG00000004336	NOM1	61	84.512	Callithrix_jacchus
ENSCAPG00000016273	NOM1	100	79.924	ENSCAFG00020005121	NOM1	61	79.924	Canis_lupus_dingo
ENSCAPG00000016273	NOM1	100	79.350	ENSCHIG00000020102	NOM1	62	79.350	Capra_hircus
ENSCAPG00000016273	NOM1	100	85.468	ENSTSYG00000000227	NOM1	62	85.468	Carlito_syrichta
ENSCAPG00000016273	NOM1	100	93.295	ENSCPOG00000025538	NOM1	60	93.295	Cavia_porcellus
ENSCAPG00000016273	NOM1	81	85.849	ENSCCAG00000014944	NOM1	100	85.955	Cebus_capucinus
ENSCAPG00000016273	NOM1	100	91.396	ENSCLAG00000000267	NOM1	62	91.396	Chinchilla_lanigera
ENSCAPG00000016273	NOM1	99	72.885	ENSCPBG00000018215	NOM1	59	73.166	Chrysemys_picta_bellii
ENSCAPG00000016273	NOM1	98	40.504	ENSCING00000005248	-	69	40.504	Ciona_intestinalis
ENSCAPG00000016273	NOM1	100	84.895	ENSCANG00000041984	NOM1	90	84.895	Colobus_angolensis_palliatus
ENSCAPG00000016273	NOM1	100	84.512	ENSCGRG00001020293	Nom1	61	84.512	Cricetulus_griseus_chok1gshd
ENSCAPG00000016273	NOM1	100	84.512	ENSCGRG00000005405	Nom1	98	84.512	Cricetulus_griseus_crigri
ENSCAPG00000016273	NOM1	93	67.683	ENSCSEG00000000932	nom1	60	67.683	Cynoglossus_semilaevis
ENSCAPG00000016273	NOM1	99	69.482	ENSCVAG00000007562	nom1	62	69.482	Cyprinodon_variegatus
ENSCAPG00000016273	NOM1	99	68.199	ENSDARG00000060027	nom1	99	68.944	Danio_rerio
ENSCAPG00000016273	NOM1	100	71.456	ENSDORG00000015682	Nom1	76	71.456	Dipodomys_ordii
ENSCAPG00000016273	NOM1	98	37.665	FBgn0035336	CG9004	61	37.665	Drosophila_melanogaster
ENSCAPG00000016273	NOM1	100	61.185	ENSETEG00000003104	NOM1	61	61.185	Echinops_telfairi
ENSCAPG00000016273	NOM1	81	50.465	ENSEBUG00000010077	nom1	95	50.465	Eptatretus_burgeri
ENSCAPG00000016273	NOM1	100	84.704	ENSEASG00005001489	NOM1	62	84.704	Equus_asinus_asinus
ENSCAPG00000016273	NOM1	100	84.130	ENSECAG00000007596	NOM1	56	84.130	Equus_caballus
ENSCAPG00000016273	NOM1	99	68.593	ENSELUG00000006266	nom1	61	68.593	Esox_lucius
ENSCAPG00000016273	NOM1	100	79.732	ENSFCAG00000006467	NOM1	63	79.732	Felis_catus
ENSCAPG00000016273	NOM1	99	71.815	ENSFALG00000006904	NOM1	75	71.815	Ficedula_albicollis
ENSCAPG00000016273	NOM1	99	89.464	ENSFDAG00000016241	NOM1	63	89.464	Fukomys_damarensis
ENSCAPG00000016273	NOM1	99	68.906	ENSFHEG00000015974	nom1	63	68.906	Fundulus_heteroclitus
ENSCAPG00000016273	NOM1	99	65.058	ENSGMOG00000005129	nom1	67	65.058	Gadus_morhua
ENSCAPG00000016273	NOM1	99	70.463	ENSGALG00000006437	NOM1	60	70.463	Gallus_gallus
ENSCAPG00000016273	NOM1	99	67.630	ENSGAFG00000003211	nom1	62	67.630	Gambusia_affinis
ENSCAPG00000016273	NOM1	99	74.038	ENSGAGG00000014347	NOM1	63	74.038	Gopherus_agassizii
ENSCAPG00000016273	NOM1	100	84.704	ENSGGOG00000010920	NOM1	56	84.704	Gorilla_gorilla
ENSCAPG00000016273	NOM1	99	68.906	ENSHBUG00000014616	nom1	62	68.906	Haplochromis_burtoni
ENSCAPG00000016273	NOM1	100	90.440	ENSHGLG00000007392	NOM1	61	90.440	Heterocephalus_glaber_female
ENSCAPG00000016273	NOM1	100	90.440	ENSHGLG00100014407	NOM1	61	90.440	Heterocephalus_glaber_male
ENSCAPG00000016273	NOM1	60	64.537	ENSHCOG00000011999	-	83	64.537	Hippocampus_comes
ENSCAPG00000016273	NOM1	99	64.615	ENSIPUG00000013980	nom1	62	64.615	Ictalurus_punctatus
ENSCAPG00000016273	NOM1	100	86.233	ENSSTOG00000031736	NOM1	91	86.233	Ictidomys_tridecemlineatus
ENSCAPG00000016273	NOM1	93	86.094	ENSJJAG00000011716	Nom1	99	86.094	Jaculus_jaculus
ENSCAPG00000016273	NOM1	99	68.008	ENSLBEG00000009252	nom1	61	68.199	Labrus_bergylta
ENSCAPG00000016273	NOM1	99	69.423	ENSLACG00000011777	NOM1	63	69.423	Latimeria_chalumnae
ENSCAPG00000016273	NOM1	99	69.231	ENSLOCG00000012452	nom1	64	69.231	Lepisosteus_oculatus
ENSCAPG00000016273	NOM1	100	74.904	ENSLAFG00000007119	NOM1	64	74.904	Loxodonta_africana
ENSCAPG00000016273	NOM1	100	80.344	ENSMMUG00000039033	NOM1	60	80.344	Macaca_mulatta
ENSCAPG00000016273	NOM1	100	85.086	ENSMLEG00000037062	NOM1	98	85.086	Mandrillus_leucophaeus
ENSCAPG00000016273	NOM1	99	67.370	ENSMAMG00000004118	nom1	61	67.370	Mastacembelus_armatus
ENSCAPG00000016273	NOM1	99	69.098	ENSMZEG00005000384	nom1	62	69.098	Maylandia_zebra
ENSCAPG00000016273	NOM1	99	70.962	ENSMGAG00000005051	NOM1	76	70.962	Meleagris_gallopavo
ENSCAPG00000016273	NOM1	100	84.704	ENSMAUG00000017988	Nom1	63	84.704	Mesocricetus_auratus
ENSCAPG00000016273	NOM1	100	83.556	ENSMICG00000017531	NOM1	62	83.556	Microcebus_murinus
ENSCAPG00000016273	NOM1	100	85.468	ENSMOCG00000015962	Nom1	62	85.468	Microtus_ochrogaster
ENSCAPG00000016273	NOM1	99	65.056	ENSMMOG00000004419	nom1	63	65.056	Mola_mola
ENSCAPG00000016273	NOM1	100	80.460	ENSMODG00000005177	NOM1	62	80.460	Monodelphis_domestica
ENSCAPG00000016273	NOM1	91	69.311	ENSMALG00000008800	nom1	60	69.311	Monopterus_albus
ENSCAPG00000016273	NOM1	100	82.792	MGP_CAROLIEiJ_G0027043	Nom1	61	82.792	Mus_caroli
ENSCAPG00000016273	NOM1	100	82.983	ENSMUSG00000001569	Nom1	61	82.983	Mus_musculus
ENSCAPG00000016273	NOM1	100	83.174	MGP_SPRETEiJ_G0028039	Nom1	61	83.174	Mus_spretus
ENSCAPG00000016273	NOM1	99	77.308	ENSMPUG00000009745	NOM1	75	77.308	Mustela_putorius_furo
ENSCAPG00000016273	NOM1	100	83.048	ENSMLUG00000009129	NOM1	87	83.048	Myotis_lucifugus
ENSCAPG00000016273	NOM1	99	68.906	ENSNBRG00000016429	nom1	93	68.906	Neolamprologus_brichardi
ENSCAPG00000016273	NOM1	100	81.870	ENSNLEG00000000238	NOM1	60	81.870	Nomascus_leucogenys
ENSCAPG00000016273	NOM1	82	83.197	ENSMEUG00000001108	NOM1	51	83.197	Notamacropus_eugenii
ENSCAPG00000016273	NOM1	83	73.220	ENSOPRG00000014676	NOM1	50	73.220	Ochotona_princeps
ENSCAPG00000016273	NOM1	99	90.979	ENSODEG00000009399	NOM1	75	90.979	Octodon_degus
ENSCAPG00000016273	NOM1	99	68.522	ENSONIG00000005958	nom1	66	68.522	Oreochromis_niloticus
ENSCAPG00000016273	NOM1	88	76.471	ENSOANG00000006139	-	97	75.974	Ornithorhynchus_anatinus
ENSCAPG00000016273	NOM1	99	70.554	ENSOCUG00000021448	-	71	70.554	Oryctolagus_cuniculus
ENSCAPG00000016273	NOM1	100	85.277	ENSOCUG00000004071	-	62	85.277	Oryctolagus_cuniculus
ENSCAPG00000016273	NOM1	97	67.583	ENSORLG00000010541	nom1	63	66.795	Oryzias_latipes
ENSCAPG00000016273	NOM1	97	67.583	ENSORLG00020010789	nom1	68	66.795	Oryzias_latipes_hni
ENSCAPG00000016273	NOM1	97	67.387	ENSORLG00015010475	nom1	68	66.603	Oryzias_latipes_hsok
ENSCAPG00000016273	NOM1	97	68.173	ENSOMEG00000004219	nom1	62	67.370	Oryzias_melastigma
ENSCAPG00000016273	NOM1	100	84.895	ENSOGAG00000001124	NOM1	86	84.895	Otolemur_garnettii
ENSCAPG00000016273	NOM1	100	78.776	ENSOARG00000007261	NOM1	70	78.776	Ovis_aries
ENSCAPG00000016273	NOM1	100	84.704	ENSPPAG00000041374	NOM1	61	84.704	Pan_paniscus
ENSCAPG00000016273	NOM1	100	79.198	ENSPTIG00000013532	NOM1	71	79.198	Panthera_tigris_altaica
ENSCAPG00000016273	NOM1	100	84.704	ENSPTRG00000019917	NOM1	61	84.704	Pan_troglodytes
ENSCAPG00000016273	NOM1	100	85.086	ENSPANG00000007605	NOM1	61	85.086	Papio_anubis
ENSCAPG00000016273	NOM1	99	62.934	ENSPKIG00000005825	nom1	62	62.934	Paramormyrops_kingsleyae
ENSCAPG00000016273	NOM1	99	73.654	ENSPSIG00000017848	NOM1	86	73.654	Pelodiscus_sinensis
ENSCAPG00000016273	NOM1	99	69.098	ENSPMGG00000002577	nom1	64	69.098	Periophthalmus_magnuspinnatus
ENSCAPG00000016273	NOM1	100	86.424	ENSPEMG00000024180	Nom1	61	86.424	Peromyscus_maniculatus_bairdii
ENSCAPG00000016273	NOM1	52	53.819	ENSPMAG00000002136	-	99	54.167	Petromyzon_marinus
ENSCAPG00000016273	NOM1	100	80.460	ENSPCIG00000027941	NOM1	58	80.460	Phascolarctos_cinereus
ENSCAPG00000016273	NOM1	99	68.593	ENSPFOG00000015771	nom1	61	68.593	Poecilia_formosa
ENSCAPG00000016273	NOM1	99	68.593	ENSPLAG00000007856	nom1	63	68.593	Poecilia_latipinna
ENSCAPG00000016273	NOM1	99	68.208	ENSPMEG00000014155	nom1	63	68.208	Poecilia_mexicana
ENSCAPG00000016273	NOM1	99	67.823	ENSPREG00000008850	nom1	62	67.823	Poecilia_reticulata
ENSCAPG00000016273	NOM1	100	78.394	ENSPPYG00000018222	NOM1	59	78.394	Pongo_abelii
ENSCAPG00000016273	NOM1	82	71.963	ENSPCAG00000000440	NOM1	54	71.963	Procavia_capensis
ENSCAPG00000016273	NOM1	100	82.600	ENSPCOG00000015222	NOM1	98	82.600	Propithecus_coquereli
ENSCAPG00000016273	NOM1	100	81.262	ENSPVAG00000014760	NOM1	61	81.262	Pteropus_vampyrus
ENSCAPG00000016273	NOM1	99	68.208	ENSPNYG00000006975	nom1	93	68.208	Pundamilia_nyererei
ENSCAPG00000016273	NOM1	99	65.134	ENSPNAG00000011085	nom1	58	65.134	Pygocentrus_nattereri
ENSCAPG00000016273	NOM1	100	78.394	ENSRNOG00000048969	AABR07059041.1	64	78.394	Rattus_norvegicus
ENSCAPG00000016273	NOM1	100	84.512	ENSRBIG00000037042	NOM1	61	84.512	Rhinopithecus_bieti
ENSCAPG00000016273	NOM1	100	84.130	ENSRROG00000037293	NOM1	61	84.130	Rhinopithecus_roxellana
ENSCAPG00000016273	NOM1	100	79.885	ENSSHAG00000017998	-	77	79.885	Sarcophilus_harrisii
ENSCAPG00000016273	NOM1	78	71.182	ENSSHAG00000002835	-	98	72.414	Sarcophilus_harrisii
ENSCAPG00000016273	NOM1	91	64.916	ENSSFOG00015003196	nom1	98	64.916	Scleropages_formosus
ENSCAPG00000016273	NOM1	99	69.674	ENSSMAG00000011047	nom1	61	69.674	Scophthalmus_maximus
ENSCAPG00000016273	NOM1	99	70.250	ENSSDUG00000006834	nom1	61	70.250	Seriola_dumerili
ENSCAPG00000016273	NOM1	99	70.250	ENSSLDG00000021812	nom1	62	70.250	Seriola_lalandi_dorsalis
ENSCAPG00000016273	NOM1	99	61.111	ENSSPUG00000002556	NOM1	87	75.410	Sphenodon_punctatus
ENSCAPG00000016273	NOM1	99	69.407	ENSSPAG00000000953	nom1	60	69.482	Stegastes_partitus
ENSCAPG00000016273	NOM1	99	71.429	ENSTGUG00000000702	-	74	71.429	Taeniopygia_guttata
ENSCAPG00000016273	NOM1	65	68.328	ENSTGUG00000016587	-	100	68.328	Taeniopygia_guttata
ENSCAPG00000016273	NOM1	99	68.906	ENSTRUG00000010239	nom1	62	68.906	Takifugu_rubripes
ENSCAPG00000016273	NOM1	99	66.987	ENSTNIG00000012783	nom1	66	66.987	Tetraodon_nigroviridis
ENSCAPG00000016273	NOM1	99	81.418	ENSTTRG00000009691	NOM1	62	81.418	Tursiops_truncatus
ENSCAPG00000016273	NOM1	100	79.732	ENSUAMG00000025450	NOM1	60	79.732	Ursus_americanus
ENSCAPG00000016273	NOM1	100	79.732	ENSUMAG00000014275	NOM1	76	79.732	Ursus_maritimus
ENSCAPG00000016273	NOM1	100	80.115	ENSVVUG00000002608	NOM1	61	80.115	Vulpes_vulpes
ENSCAPG00000016273	NOM1	94	68.980	ENSXETG00000021611	nom1	94	68.511	Xenopus_tropicalis
ENSCAPG00000016273	NOM1	99	68.401	ENSXMAG00000002451	nom1	62	68.401	Xiphophorus_maculatus