EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016278 (Gene tree)
Gene ID: -
Gene Symbol: STN1
Alias: FLJ22559|OBFC1|bA541N10.2
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 23862 bases
Position: chrAVPZ01000023.1:10871701-10895562
Accession: 26200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016377	tRNA_anti-codon	PF01336.25	2.8e-07	1	1
ENSCAPP00000016373	tRNA_anti-codon	PF01336.25	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020169	STN1-202	858	-	ENSCAPP00000016377	285 (aa)	-	-
ENSCAPT00000020165	STN1-201	978	-	ENSCAPP00000016373	325 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016278	STN1	100	78.769	ENSG00000107960	STN1	88	78.769	Homo_sapiens
ENSCAPG00000016278	STN1	100	74.233	ENSAMEG00000017971	STN1	86	74.847	Ailuropoda_melanoleuca
ENSCAPG00000016278	STN1	100	53.231	ENSAPLG00000006661	STN1	88	53.231	Anas_platyrhynchos
ENSCAPG00000016278	STN1	100	45.231	ENSACAG00000004954	STN1	88	45.231	Anolis_carolinensis
ENSCAPG00000016278	STN1	100	77.231	ENSANAG00000038147	STN1	88	77.846	Aotus_nancymaae
ENSCAPG00000016278	STN1	100	73.846	ENSBTAG00000015019	STN1	88	73.846	Bos_taurus
ENSCAPG00000016278	STN1	100	76.923	ENSCJAG00000040388	STN1	88	76.923	Callithrix_jacchus
ENSCAPG00000016278	STN1	100	76.596	ENSCAFG00000010483	STN1	88	76.596	Canis_familiaris
ENSCAPG00000016278	STN1	100	76.147	ENSCAFG00020010650	STN1	88	76.147	Canis_lupus_dingo
ENSCAPG00000016278	STN1	100	73.846	ENSCHIG00000019425	-	88	73.846	Capra_hircus
ENSCAPG00000016278	STN1	100	64.615	ENSCHIG00000003253	-	85	64.615	Capra_hircus
ENSCAPG00000016278	STN1	100	99.077	ENSCPOG00000006273	STN1	86	99.077	Cavia_porcellus
ENSCAPG00000016278	STN1	100	76.308	ENSCCAG00000020507	STN1	88	76.923	Cebus_capucinus
ENSCAPG00000016278	STN1	100	77.538	ENSCATG00000043103	STN1	88	77.538	Cercocebus_atys
ENSCAPG00000016278	STN1	100	86.769	ENSCLAG00000001617	STN1	86	86.769	Chinchilla_lanigera
ENSCAPG00000016278	STN1	100	78.154	ENSCSAG00000005318	STN1	88	78.154	Chlorocebus_sabaeus
ENSCAPG00000016278	STN1	100	56.308	ENSCPBG00000024481	STN1	88	56.308	Chrysemys_picta_bellii
ENSCAPG00000016278	STN1	100	77.231	ENSCANG00000029004	STN1	88	77.231	Colobus_angolensis_palliatus
ENSCAPG00000016278	STN1	100	59.509	ENSCGRG00001023175	Stn1	85	59.509	Cricetulus_griseus_chok1gshd
ENSCAPG00000016278	STN1	100	68.405	ENSCGRG00000004324	Stn1	86	68.405	Cricetulus_griseus_crigri
ENSCAPG00000016278	STN1	99	41.088	ENSDARG00000007734	stn1	87	41.088	Danio_rerio
ENSCAPG00000016278	STN1	95	71.691	ENSDNOG00000011022	STN1	85	76.000	Dasypus_novemcinctus
ENSCAPG00000016278	STN1	100	74.769	ENSDORG00000005994	Stn1	88	74.769	Dipodomys_ordii
ENSCAPG00000016278	STN1	100	66.462	ENSETEG00000013967	STN1	88	66.462	Echinops_telfairi
ENSCAPG00000016278	STN1	100	77.607	ENSEASG00005015134	STN1	88	77.607	Equus_asinus_asinus
ENSCAPG00000016278	STN1	100	77.607	ENSECAG00000023477	STN1	88	77.607	Equus_caballus
ENSCAPG00000016278	STN1	100	79.385	ENSFCAG00000030378	STN1	88	79.385	Felis_catus
ENSCAPG00000016278	STN1	100	54.154	ENSFALG00000008791	STN1	88	54.154	Ficedula_albicollis
ENSCAPG00000016278	STN1	100	79.385	ENSFDAG00000007528	STN1	86	79.385	Fukomys_damarensis
ENSCAPG00000016278	STN1	100	53.374	ENSGALG00000008304	STN1	88	53.374	Gallus_gallus
ENSCAPG00000016278	STN1	93	50.000	ENSGAGG00000003673	STN1	80	53.160	Gopherus_agassizii
ENSCAPG00000016278	STN1	100	79.077	ENSGGOG00000008979	STN1	88	79.077	Gorilla_gorilla
ENSCAPG00000016278	STN1	100	82.462	ENSHGLG00000002775	OBFC1	86	82.462	Heterocephalus_glaber_female
ENSCAPG00000016278	STN1	100	82.154	ENSHGLG00100012701	STN1	86	82.154	Heterocephalus_glaber_male
ENSCAPG00000016278	STN1	100	37.994	ENSHCOG00000002048	stn1	88	37.994	Hippocampus_comes
ENSCAPG00000016278	STN1	100	77.846	ENSSTOG00000011905	STN1	86	78.462	Ictidomys_tridecemlineatus
ENSCAPG00000016278	STN1	100	68.923	ENSJJAG00000020389	Stn1	87	68.923	Jaculus_jaculus
ENSCAPG00000016278	STN1	100	42.598	ENSLACG00000012381	STN1	88	42.598	Latimeria_chalumnae
ENSCAPG00000016278	STN1	100	74.164	ENSLAFG00000004232	STN1	86	74.164	Loxodonta_africana
ENSCAPG00000016278	STN1	100	77.538	ENSMFAG00000041817	STN1	88	77.538	Macaca_fascicularis
ENSCAPG00000016278	STN1	100	77.538	ENSMMUG00000015323	STN1	88	77.538	Macaca_mulatta
ENSCAPG00000016278	STN1	100	76.923	ENSMNEG00000031906	STN1	88	76.923	Macaca_nemestrina
ENSCAPG00000016278	STN1	100	77.231	ENSMLEG00000040619	STN1	88	77.231	Mandrillus_leucophaeus
ENSCAPG00000016278	STN1	100	52.870	ENSMGAG00000010550	STN1	86	52.870	Meleagris_gallopavo
ENSCAPG00000016278	STN1	100	69.632	ENSMAUG00000015671	Stn1	86	69.632	Mesocricetus_auratus
ENSCAPG00000016278	STN1	100	75.385	ENSMICG00000012547	STN1	88	75.385	Microcebus_murinus
ENSCAPG00000016278	STN1	100	62.500	ENSMOCG00000009637	Stn1	87	62.500	Microtus_ochrogaster
ENSCAPG00000016278	STN1	100	63.190	ENSMODG00000011003	STN1	88	63.190	Monodelphis_domestica
ENSCAPG00000016278	STN1	99	67.385	MGP_CAROLIEiJ_G0023057	Stn1	86	67.385	Mus_caroli
ENSCAPG00000016278	STN1	99	67.692	ENSMUSG00000042694	Stn1	86	67.692	Mus_musculus
ENSCAPG00000016278	STN1	99	68.000	MGP_PahariEiJ_G0014547	Stn1	86	68.000	Mus_pahari
ENSCAPG00000016278	STN1	99	67.385	MGP_SPRETEiJ_G0023978	Stn1	86	67.385	Mus_spretus
ENSCAPG00000016278	STN1	100	66.258	ENSMPUG00000016800	STN1	88	67.178	Mustela_putorius_furo
ENSCAPG00000016278	STN1	100	72.424	ENSMLUG00000002037	STN1	86	72.424	Myotis_lucifugus
ENSCAPG00000016278	STN1	100	74.847	ENSNGAG00000023986	Stn1	86	74.847	Nannospalax_galili
ENSCAPG00000016278	STN1	100	78.769	ENSNLEG00000015282	STN1	88	78.769	Nomascus_leucogenys
ENSCAPG00000016278	STN1	100	71.385	ENSOPRG00000010707	STN1	88	71.385	Ochotona_princeps
ENSCAPG00000016278	STN1	100	76.000	ENSODEG00000007270	STN1	86	76.000	Octodon_degus
ENSCAPG00000016278	STN1	100	61.043	ENSOANG00000001628	STN1	88	61.043	Ornithorhynchus_anatinus
ENSCAPG00000016278	STN1	100	75.153	ENSOCUG00000003028	STN1	86	76.687	Oryctolagus_cuniculus
ENSCAPG00000016278	STN1	100	37.349	ENSORLG00000002353	stn1	90	37.349	Oryzias_latipes
ENSCAPG00000016278	STN1	100	37.651	ENSORLG00020012935	stn1	88	37.651	Oryzias_latipes_hni
ENSCAPG00000016278	STN1	100	37.349	ENSORLG00015012154	stn1	88	37.349	Oryzias_latipes_hsok
ENSCAPG00000016278	STN1	100	74.390	ENSOGAG00000008722	STN1	86	74.390	Otolemur_garnettii
ENSCAPG00000016278	STN1	100	73.333	ENSOARG00000004883	STN1	86	73.333	Ovis_aries
ENSCAPG00000016278	STN1	100	79.077	ENSPPAG00000030947	STN1	88	79.077	Pan_paniscus
ENSCAPG00000016278	STN1	100	78.769	ENSPPRG00000010476	STN1	88	78.769	Panthera_pardus
ENSCAPG00000016278	STN1	100	77.134	ENSPTIG00000017333	STN1	88	77.134	Panthera_tigris_altaica
ENSCAPG00000016278	STN1	100	79.077	ENSPTRG00000002919	STN1	88	79.077	Pan_troglodytes
ENSCAPG00000016278	STN1	100	77.538	ENSPANG00000020926	STN1	88	77.538	Papio_anubis
ENSCAPG00000016278	STN1	99	36.858	ENSPKIG00000000721	stn1	87	36.858	Paramormyrops_kingsleyae
ENSCAPG00000016278	STN1	100	54.128	ENSPSIG00000010802	STN1	88	54.128	Pelodiscus_sinensis
ENSCAPG00000016278	STN1	100	70.031	ENSPEMG00000013944	Stn1	86	70.031	Peromyscus_maniculatus_bairdii
ENSCAPG00000016278	STN1	100	61.846	ENSPCIG00000024497	STN1	88	61.846	Phascolarctos_cinereus
ENSCAPG00000016278	STN1	100	78.154	ENSPPYG00000002628	STN1	88	78.154	Pongo_abelii
ENSCAPG00000016278	STN1	100	78.462	ENSPCOG00000017648	STN1	88	78.462	Propithecus_coquereli
ENSCAPG00000016278	STN1	100	74.769	ENSPVAG00000004187	STN1	88	74.769	Pteropus_vampyrus
ENSCAPG00000016278	STN1	100	68.098	ENSRNOG00000020376	Stn1	86	68.098	Rattus_norvegicus
ENSCAPG00000016278	STN1	100	77.846	ENSRBIG00000039819	STN1	88	77.846	Rhinopithecus_bieti
ENSCAPG00000016278	STN1	100	78.154	ENSRROG00000013903	STN1	88	78.154	Rhinopithecus_roxellana
ENSCAPG00000016278	STN1	100	77.231	ENSSBOG00000031516	STN1	88	77.846	Saimiri_boliviensis_boliviensis
ENSCAPG00000016278	STN1	100	60.615	ENSSHAG00000017550	STN1	88	60.615	Sarcophilus_harrisii
ENSCAPG00000016278	STN1	100	35.417	ENSSFOG00015004107	stn1	88	35.417	Scleropages_formosus
ENSCAPG00000016278	STN1	100	75.077	ENSSSCG00000010605	STN1	74	75.077	Sus_scrofa
ENSCAPG00000016278	STN1	100	52.266	ENSTGUG00000010354	STN1	88	52.266	Taeniopygia_guttata
ENSCAPG00000016278	STN1	100	38.226	ENSTNIG00000014162	stn1	86	38.226	Tetraodon_nigroviridis
ENSCAPG00000016278	STN1	62	82.353	ENSTBEG00000000659	STN1	54	82.353	Tupaia_belangeri
ENSCAPG00000016278	STN1	100	74.462	ENSTTRG00000003375	STN1	88	74.462	Tursiops_truncatus
ENSCAPG00000016278	STN1	100	69.725	ENSUMAG00000023647	STN1	87	69.725	Ursus_maritimus
ENSCAPG00000016278	STN1	100	78.462	ENSVPAG00000002530	STN1	88	78.462	Vicugna_pacos
ENSCAPG00000016278	STN1	100	76.220	ENSVVUG00000004636	-	52	76.220	Vulpes_vulpes
ENSCAPG00000016278	STN1	100	49.851	ENSXETG00000011402	STN1	89	49.851	Xenopus_tropicalis