EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016300 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 20284 bases
Position: chrAVPZ01000023.1:50313353-50333636
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016405	zf-C3HC	PF07967.13	1e-14	1	1
ENSCAPP00000016403	zf-C3HC	PF07967.13	1.1e-14	1	1
ENSCAPP00000016407	zf-C3HC	PF07967.13	1.1e-14	1	1
ENSCAPP00000016405	Rsm1	PF08600.10	3.5e-13	1	2
ENSCAPP00000016405	Rsm1	PF08600.10	3.5e-13	2	2
ENSCAPP00000016407	Rsm1	PF08600.10	1.7e-12	1	2
ENSCAPP00000016407	Rsm1	PF08600.10	1.7e-12	2	2
ENSCAPP00000016403	Rsm1	PF08600.10	2.3e-12	1	2
ENSCAPP00000016403	Rsm1	PF08600.10	2.3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020197	ZC3HC1-202	987	-	ENSCAPP00000016405	328 (aa)	-	-
ENSCAPT00000020195	ZC3HC1-201	1200	-	ENSCAPP00000016403	399 (aa)	-	-
ENSCAPT00000020199	ZC3HC1-203	1140	-	ENSCAPP00000016407	379 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016300	ZC3HC1	92	80.233	ENSG00000091732	ZC3HC1	94	63.774	Homo_sapiens
ENSCAPG00000016300	ZC3HC1	94	37.389	ENSAPOG00000009078	zc3hc1	87	37.389	Acanthochromis_polyacanthus
ENSCAPG00000016300	ZC3HC1	100	63.399	ENSAMEG00000005425	ZC3HC1	90	63.537	Ailuropoda_melanoleuca
ENSCAPG00000016300	ZC3HC1	93	39.130	ENSACIG00000019513	zc3hc1	87	36.564	Amphilophus_citrinellus
ENSCAPG00000016300	ZC3HC1	94	37.611	ENSAOCG00000024310	zc3hc1	87	37.611	Amphiprion_ocellaris
ENSCAPG00000016300	ZC3HC1	94	37.611	ENSAPEG00000004907	zc3hc1	87	37.611	Amphiprion_percula
ENSCAPG00000016300	ZC3HC1	94	38.443	ENSATEG00000016898	zc3hc1	87	37.757	Anabas_testudineus
ENSCAPG00000016300	ZC3HC1	97	47.674	ENSAPLG00000003832	ZC3HC1	99	49.436	Anas_platyrhynchos
ENSCAPG00000016300	ZC3HC1	100	47.854	ENSACAG00000001638	ZC3HC1	90	47.854	Anolis_carolinensis
ENSCAPG00000016300	ZC3HC1	93	78.613	ENSANAG00000022213	ZC3HC1	96	81.500	Aotus_nancymaae
ENSCAPG00000016300	ZC3HC1	93	39.130	ENSACLG00000025033	zc3hc1	94	37.194	Astatotilapia_calliptera
ENSCAPG00000016300	ZC3HC1	86	49.180	ENSAMXG00000036792	zc3hc1	87	36.952	Astyanax_mexicanus
ENSCAPG00000016300	ZC3HC1	92	74.286	ENSBTAG00000011247	ZC3HC1	90	62.061	Bos_taurus
ENSCAPG00000016300	ZC3HC1	93	78.613	ENSCJAG00000010536	ZC3HC1	96	81.500	Callithrix_jacchus
ENSCAPG00000016300	ZC3HC1	93	75.000	ENSCAFG00000028735	-	90	63.816	Canis_familiaris
ENSCAPG00000016300	ZC3HC1	93	75.000	ENSCAFG00000029401	-	89	63.816	Canis_familiaris
ENSCAPG00000016300	ZC3HC1	93	74.126	ENSCAFG00000001499	-	89	63.617	Canis_familiaris
ENSCAPG00000016300	ZC3HC1	93	75.000	ENSCAFG00000031850	-	90	63.816	Canis_familiaris
ENSCAPG00000016300	ZC3HC1	93	75.000	ENSCAFG00020006829	-	90	63.816	Canis_lupus_dingo
ENSCAPG00000016300	ZC3HC1	93	78.613	ENSCAFG00020023333	-	89	66.667	Canis_lupus_dingo
ENSCAPG00000016300	ZC3HC1	100	61.024	ENSCHIG00000014103	ZC3HC1	90	61.161	Capra_hircus
ENSCAPG00000016300	ZC3HC1	93	77.917	ENSTSYG00000002843	ZC3HC1	90	62.719	Carlito_syrichta
ENSCAPG00000016300	ZC3HC1	100	78.194	ENSCPOG00000014034	ZC3HC1	90	78.194	Cavia_porcellus
ENSCAPG00000016300	ZC3HC1	92	68.421	ENSCCAG00000020384	ZC3HC1	100	80.617	Cebus_capucinus
ENSCAPG00000016300	ZC3HC1	93	80.347	ENSCATG00000023130	ZC3HC1	70	95.238	Cercocebus_atys
ENSCAPG00000016300	ZC3HC1	91	65.847	ENSCLAG00000008260	ZC3HC1	88	65.847	Chinchilla_lanigera
ENSCAPG00000016300	ZC3HC1	60	80.328	ENSCSAG00000009881	ZC3HC1	63	90.909	Chlorocebus_sabaeus
ENSCAPG00000016300	ZC3HC1	99	61.894	ENSCHOG00000011846	ZC3HC1	99	62.555	Choloepus_hoffmanni
ENSCAPG00000016300	ZC3HC1	100	49.455	ENSCPBG00000017519	ZC3HC1	91	50.000	Chrysemys_picta_bellii
ENSCAPG00000016300	ZC3HC1	93	80.347	ENSCANG00000029091	ZC3HC1	96	81.000	Colobus_angolensis_palliatus
ENSCAPG00000016300	ZC3HC1	100	66.372	ENSCGRG00001018805	Zc3hc1	89	65.789	Cricetulus_griseus_chok1gshd
ENSCAPG00000016300	ZC3HC1	100	66.372	ENSCGRG00000017114	Zc3hc1	90	60.738	Cricetulus_griseus_crigri
ENSCAPG00000016300	ZC3HC1	94	36.703	ENSCSEG00000009284	zc3hc1	85	36.484	Cynoglossus_semilaevis
ENSCAPG00000016300	ZC3HC1	93	35.874	ENSCVAG00000011566	zc3hc1	86	35.874	Cyprinodon_variegatus
ENSCAPG00000016300	ZC3HC1	92	40.179	ENSDARG00000062651	zc3hc1	86	38.117	Danio_rerio
ENSCAPG00000016300	ZC3HC1	100	61.853	ENSDNOG00000045016	ZC3HC1	90	62.500	Dasypus_novemcinctus
ENSCAPG00000016300	ZC3HC1	100	56.954	ENSDORG00000008697	Zc3hc1	97	58.057	Dipodomys_ordii
ENSCAPG00000016300	ZC3HC1	94	75.820	ENSEASG00005008789	ZC3HC1	97	63.077	Equus_asinus_asinus
ENSCAPG00000016300	ZC3HC1	94	76.230	ENSECAG00000017886	ZC3HC1	90	63.077	Equus_caballus
ENSCAPG00000016300	ZC3HC1	65	71.605	ENSEEUG00000003123	ZC3HC1	52	73.457	Erinaceus_europaeus
ENSCAPG00000016300	ZC3HC1	93	36.105	ENSELUG00000023168	zc3hc1	86	37.826	Esox_lucius
ENSCAPG00000016300	ZC3HC1	93	76.879	ENSFCAG00000010429	ZC3HC1	96	62.500	Felis_catus
ENSCAPG00000016300	ZC3HC1	87	60.294	ENSFALG00000005006	ZC3HC1	100	45.513	Ficedula_albicollis
ENSCAPG00000016300	ZC3HC1	93	83.815	ENSFDAG00000019897	ZC3HC1	89	71.930	Fukomys_damarensis
ENSCAPG00000016300	ZC3HC1	94	41.935	ENSFHEG00000020149	zc3hc1	87	36.444	Fundulus_heteroclitus
ENSCAPG00000016300	ZC3HC1	94	36.386	ENSGMOG00000002914	zc3hc1	87	37.529	Gadus_morhua
ENSCAPG00000016300	ZC3HC1	89	56.429	ENSGALG00000008003	ZC3HC1	91	44.150	Gallus_gallus
ENSCAPG00000016300	ZC3HC1	96	35.965	ENSGAFG00000016095	zc3hc1	88	35.965	Gambusia_affinis
ENSCAPG00000016300	ZC3HC1	95	36.854	ENSGACG00000019706	zc3hc1	87	37.277	Gasterosteus_aculeatus
ENSCAPG00000016300	ZC3HC1	85	46.954	ENSGAGG00000016106	ZC3HC1	100	47.970	Gopherus_agassizii
ENSCAPG00000016300	ZC3HC1	99	64.238	ENSGGOG00000015504	ZC3HC1	96	81.910	Gorilla_gorilla
ENSCAPG00000016300	ZC3HC1	93	39.130	ENSHBUG00000008347	zc3hc1	87	37.416	Haplochromis_burtoni
ENSCAPG00000016300	ZC3HC1	93	82.659	ENSHGLG00000005085	ZC3HC1	89	71.930	Heterocephalus_glaber_female
ENSCAPG00000016300	ZC3HC1	93	82.081	ENSHGLG00100011395	ZC3HC1	89	71.053	Heterocephalus_glaber_male
ENSCAPG00000016300	ZC3HC1	93	36.468	ENSHCOG00000014309	zc3hc1	86	37.358	Hippocampus_comes
ENSCAPG00000016300	ZC3HC1	100	80.000	ENSSTOG00000023599	-	89	63.023	Ictidomys_tridecemlineatus
ENSCAPG00000016300	ZC3HC1	92	40.426	ENSKMAG00000015315	zc3hc1	80	36.854	Kryptolebias_marmoratus
ENSCAPG00000016300	ZC3HC1	93	37.168	ENSLBEG00000017325	zc3hc1	92	37.168	Labrus_bergylta
ENSCAPG00000016300	ZC3HC1	81	40.426	ENSLACG00000013032	ZC3HC1	89	40.945	Latimeria_chalumnae
ENSCAPG00000016300	ZC3HC1	94	42.788	ENSLOCG00000015963	zc3hc1	86	43.311	Lepisosteus_oculatus
ENSCAPG00000016300	ZC3HC1	94	76.735	ENSLAFG00000001292	ZC3HC1	90	62.581	Loxodonta_africana
ENSCAPG00000016300	ZC3HC1	93	80.925	ENSMFAG00000030176	ZC3HC1	97	62.796	Macaca_fascicularis
ENSCAPG00000016300	ZC3HC1	93	80.347	ENSMMUG00000006155	ZC3HC1	72	95.238	Macaca_mulatta
ENSCAPG00000016300	ZC3HC1	93	80.925	ENSMNEG00000011833	ZC3HC1	100	81.132	Macaca_nemestrina
ENSCAPG00000016300	ZC3HC1	93	80.925	ENSMLEG00000027328	ZC3HC1	96	81.500	Mandrillus_leucophaeus
ENSCAPG00000016300	ZC3HC1	94	38.359	ENSMAMG00000010691	zc3hc1	87	38.359	Mastacembelus_armatus
ENSCAPG00000016300	ZC3HC1	93	39.130	ENSMZEG00005007142	zc3hc1	87	37.194	Maylandia_zebra
ENSCAPG00000016300	ZC3HC1	98	56.098	ENSMGAG00000002977	ZC3HC1	91	48.465	Meleagris_gallopavo
ENSCAPG00000016300	ZC3HC1	88	63.717	ENSMAUG00000017032	Zc3hc1	92	60.688	Mesocricetus_auratus
ENSCAPG00000016300	ZC3HC1	100	63.457	ENSMICG00000009167	ZC3HC1	89	68.421	Microcebus_murinus
ENSCAPG00000016300	ZC3HC1	100	65.487	ENSMOCG00000015239	Zc3hc1	89	64.912	Microtus_ochrogaster
ENSCAPG00000016300	ZC3HC1	94	39.823	ENSMMOG00000002204	zc3hc1	98	39.823	Mola_mola
ENSCAPG00000016300	ZC3HC1	94	65.984	ENSMODG00000014630	ZC3HC1	71	67.213	Monodelphis_domestica
ENSCAPG00000016300	ZC3HC1	92	39.080	ENSMALG00000014447	zc3hc1	87	37.556	Monopterus_albus
ENSCAPG00000016300	ZC3HC1	92	77.515	MGP_CAROLIEiJ_G0028183	Zc3hc1	89	64.218	Mus_caroli
ENSCAPG00000016300	ZC3HC1	100	62.175	ENSMUSG00000039130	Zc3hc1	90	63.596	Mus_musculus
ENSCAPG00000016300	ZC3HC1	100	62.269	MGP_PahariEiJ_G0021941	Zc3hc1	88	65.789	Mus_pahari
ENSCAPG00000016300	ZC3HC1	100	62.175	MGP_SPRETEiJ_G0029183	Zc3hc1	90	63.596	Mus_spretus
ENSCAPG00000016300	ZC3HC1	87	74.286	ENSMPUG00000005297	ZC3HC1	85	61.628	Mustela_putorius_furo
ENSCAPG00000016300	ZC3HC1	65	95.455	ENSMLUG00000029228	-	78	95.455	Myotis_lucifugus
ENSCAPG00000016300	ZC3HC1	94	75.000	ENSMLUG00000000063	-	90	61.874	Myotis_lucifugus
ENSCAPG00000016300	ZC3HC1	100	61.050	ENSNGAG00000019014	Zc3hc1	90	61.926	Nannospalax_galili
ENSCAPG00000016300	ZC3HC1	93	40.659	ENSNBRG00000004577	zc3hc1	87	37.277	Neolamprologus_brichardi
ENSCAPG00000016300	ZC3HC1	92	79.651	ENSNLEG00000012698	ZC3HC1	71	90.909	Nomascus_leucogenys
ENSCAPG00000016300	ZC3HC1	100	56.579	ENSMEUG00000011023	ZC3HC1	90	57.237	Notamacropus_eugenii
ENSCAPG00000016300	ZC3HC1	94	86.420	ENSODEG00000014604	ZC3HC1	89	70.796	Octodon_degus
ENSCAPG00000016300	ZC3HC1	93	39.130	ENSONIG00000011644	zc3hc1	87	37.416	Oreochromis_niloticus
ENSCAPG00000016300	ZC3HC1	100	50.318	ENSOANG00000011460	ZC3HC1	100	51.380	Ornithorhynchus_anatinus
ENSCAPG00000016300	ZC3HC1	100	60.652	ENSOCUG00000017137	ZC3HC1	90	61.220	Oryctolagus_cuniculus
ENSCAPG00000016300	ZC3HC1	93	37.273	ENSORLG00000014409	zc3hc1	85	37.273	Oryzias_latipes
ENSCAPG00000016300	ZC3HC1	93	37.273	ENSORLG00020015874	zc3hc1	85	37.273	Oryzias_latipes_hni
ENSCAPG00000016300	ZC3HC1	93	37.273	ENSORLG00015014641	zc3hc1	85	37.273	Oryzias_latipes_hsok
ENSCAPG00000016300	ZC3HC1	92	40.426	ENSOMEG00000000215	zc3hc1	87	37.387	Oryzias_melastigma
ENSCAPG00000016300	ZC3HC1	92	40.426	ENSOMEG00000020604	zc3hc1	87	37.613	Oryzias_melastigma
ENSCAPG00000016300	ZC3HC1	98	76.471	ENSOGAG00000026193	ZC3HC1	90	57.019	Otolemur_garnettii
ENSCAPG00000016300	ZC3HC1	92	72.727	ENSOARG00000004907	ZC3HC1	89	61.438	Ovis_aries
ENSCAPG00000016300	ZC3HC1	92	80.233	ENSPPAG00000043172	ZC3HC1	96	81.910	Pan_paniscus
ENSCAPG00000016300	ZC3HC1	93	75.723	ENSPPRG00000001004	ZC3HC1	96	62.500	Panthera_pardus
ENSCAPG00000016300	ZC3HC1	93	76.301	ENSPTIG00000007823	ZC3HC1	96	62.281	Panthera_tigris_altaica
ENSCAPG00000016300	ZC3HC1	92	80.233	ENSPTRG00000019685	ZC3HC1	96	81.910	Pan_troglodytes
ENSCAPG00000016300	ZC3HC1	93	80.925	ENSPANG00000014229	ZC3HC1	96	81.500	Papio_anubis
ENSCAPG00000016300	ZC3HC1	94	39.416	ENSPKIG00000007172	zc3hc1	86	39.954	Paramormyrops_kingsleyae
ENSCAPG00000016300	ZC3HC1	92	59.574	ENSPSIG00000016646	ZC3HC1	91	46.336	Pelodiscus_sinensis
ENSCAPG00000016300	ZC3HC1	94	35.514	ENSPMGG00000003548	zc3hc1	89	38.172	Periophthalmus_magnuspinnatus
ENSCAPG00000016300	ZC3HC1	100	61.269	ENSPEMG00000000514	Zc3hc1	90	60.907	Peromyscus_maniculatus_bairdii
ENSCAPG00000016300	ZC3HC1	100	54.646	ENSPCIG00000020619	ZC3HC1	100	53.571	Phascolarctos_cinereus
ENSCAPG00000016300	ZC3HC1	95	37.624	ENSPFOG00000003466	zc3hc1	88	36.585	Poecilia_formosa
ENSCAPG00000016300	ZC3HC1	95	38.614	ENSPLAG00000022211	zc3hc1	88	36.585	Poecilia_latipinna
ENSCAPG00000016300	ZC3HC1	95	37.624	ENSPMEG00000001458	zc3hc1	91	36.092	Poecilia_mexicana
ENSCAPG00000016300	ZC3HC1	95	37.624	ENSPREG00000004004	zc3hc1	88	36.123	Poecilia_reticulata
ENSCAPG00000016300	ZC3HC1	99	68.106	ENSPPYG00000017998	ZC3HC1	89	68.571	Pongo_abelii
ENSCAPG00000016300	ZC3HC1	93	71.429	ENSPCAG00000001182	ZC3HC1	98	60.917	Procavia_capensis
ENSCAPG00000016300	ZC3HC1	93	80.347	ENSPCOG00000017354	ZC3HC1	96	64.334	Propithecus_coquereli
ENSCAPG00000016300	ZC3HC1	100	62.749	ENSPVAG00000003195	ZC3HC1	90	65.708	Pteropus_vampyrus
ENSCAPG00000016300	ZC3HC1	93	39.130	ENSPNYG00000020692	zc3hc1	87	37.194	Pundamilia_nyererei
ENSCAPG00000016300	ZC3HC1	91	40.244	ENSPNAG00000020746	zc3hc1	87	36.195	Pygocentrus_nattereri
ENSCAPG00000016300	ZC3HC1	100	61.707	ENSRNOG00000010154	Zc3hc1	90	62.363	Rattus_norvegicus
ENSCAPG00000016300	ZC3HC1	93	79.769	ENSRBIG00000029409	ZC3HC1	100	79.717	Rhinopithecus_bieti
ENSCAPG00000016300	ZC3HC1	93	79.769	ENSRROG00000041831	ZC3HC1	95	80.808	Rhinopithecus_roxellana
ENSCAPG00000016300	ZC3HC1	100	68.137	ENSSBOG00000032787	ZC3HC1	96	82.000	Saimiri_boliviensis_boliviensis
ENSCAPG00000016300	ZC3HC1	100	56.332	ENSSHAG00000002529	ZC3HC1	98	56.987	Sarcophilus_harrisii
ENSCAPG00000016300	ZC3HC1	98	38.246	ENSSFOG00015003667	zc3hc1	82	41.818	Scleropages_formosus
ENSCAPG00000016300	ZC3HC1	94	38.170	ENSSMAG00000000647	zc3hc1	78	39.198	Scophthalmus_maximus
ENSCAPG00000016300	ZC3HC1	93	39.130	ENSSDUG00000004241	zc3hc1	84	38.341	Seriola_dumerili
ENSCAPG00000016300	ZC3HC1	94	38.242	ENSSLDG00000025056	zc3hc1	84	38.514	Seriola_lalandi_dorsalis
ENSCAPG00000016300	ZC3HC1	94	74.180	ENSSARG00000012013	ZC3HC1	90	60.394	Sorex_araneus
ENSCAPG00000016300	ZC3HC1	99	48.223	ENSSPUG00000000778	ZC3HC1	86	48.622	Sphenodon_punctatus
ENSCAPG00000016300	ZC3HC1	98	39.130	ENSSPAG00000020041	zc3hc1	92	37.736	Stegastes_partitus
ENSCAPG00000016300	ZC3HC1	93	76.301	ENSSSCG00000016565	ZC3HC1	100	59.383	Sus_scrofa
ENSCAPG00000016300	ZC3HC1	58	55.000	ENSTGUG00000016262	ZC3HC1	97	56.250	Taeniopygia_guttata
ENSCAPG00000016300	ZC3HC1	95	36.458	ENSTRUG00000020077	zc3hc1	88	36.458	Takifugu_rubripes
ENSCAPG00000016300	ZC3HC1	94	38.542	ENSTNIG00000007585	zc3hc1	92	38.542	Tetraodon_nigroviridis
ENSCAPG00000016300	ZC3HC1	82	90.625	ENSTBEG00000005216	ZC3HC1	64	90.625	Tupaia_belangeri
ENSCAPG00000016300	ZC3HC1	100	64.114	ENSTTRG00000008458	ZC3HC1	95	65.284	Tursiops_truncatus
ENSCAPG00000016300	ZC3HC1	100	63.436	ENSUAMG00000020249	ZC3HC1	90	63.576	Ursus_americanus
ENSCAPG00000016300	ZC3HC1	100	62.775	ENSUMAG00000009268	ZC3HC1	90	62.914	Ursus_maritimus
ENSCAPG00000016300	ZC3HC1	80	80.488	ENSVPAG00000010846	ZC3HC1	53	80.488	Vicugna_pacos
ENSCAPG00000016300	ZC3HC1	93	77.982	ENSVVUG00000012386	ZC3HC1	89	62.558	Vulpes_vulpes
ENSCAPG00000016300	ZC3HC1	98	39.540	ENSXETG00000033900	zc3hc1	88	39.540	Xenopus_tropicalis
ENSCAPG00000016300	ZC3HC1	96	35.762	ENSXCOG00000013570	zc3hc1	94	35.121	Xiphophorus_couchianus
ENSCAPG00000016300	ZC3HC1	95	37.624	ENSXMAG00000010979	zc3hc1	95	36.044	Xiphophorus_maculatus