EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016302 (Gene tree)
Gene ID: -
Gene Symbol: SF3B6
Alias: CGI-110|Ht006|P14|SAP14a|SF3B14a
Full Name: splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 7442 bases
Position: chrAVPZ01000100.1:6215305-6222746
Accession: 30096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016397	RRM_1	PF00076.22	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020189	SF3B6-201	369	-	ENSCAPP00000016397	122 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016302	SF3B6	99	96.694	ENSG00000115128	SF3B6	97	96.694	Homo_sapiens
ENSCAPG00000016302	SF3B6	99	95.041	ENSAPOG00000023788	sf3b6	97	95.041	Acanthochromis_polyacanthus
ENSCAPG00000016302	SF3B6	99	96.694	ENSAMEG00000002786	SF3B6	97	96.694	Ailuropoda_melanoleuca
ENSCAPG00000016302	SF3B6	99	95.041	ENSACIG00000012608	sf3b6	97	95.041	Amphilophus_citrinellus
ENSCAPG00000016302	SF3B6	99	95.041	ENSAOCG00000013394	sf3b6	97	95.041	Amphiprion_ocellaris
ENSCAPG00000016302	SF3B6	99	95.041	ENSAPEG00000015311	sf3b6	97	95.041	Amphiprion_percula
ENSCAPG00000016302	SF3B6	99	95.041	ENSATEG00000016569	sf3b6	97	95.041	Anabas_testudineus
ENSCAPG00000016302	SF3B6	99	96.694	ENSACAG00000011677	SF3B6	97	96.694	Anolis_carolinensis
ENSCAPG00000016302	SF3B6	99	96.694	ENSANAG00000027284	SF3B6	92	96.694	Aotus_nancymaae
ENSCAPG00000016302	SF3B6	99	95.041	ENSACLG00000007793	sf3b6	97	95.041	Astatotilapia_calliptera
ENSCAPG00000016302	SF3B6	99	96.694	ENSAMXG00000034888	sf3b6	97	96.694	Astyanax_mexicanus
ENSCAPG00000016302	SF3B6	99	96.694	ENSBTAG00000003407	SF3B6	97	96.694	Bos_taurus
ENSCAPG00000016302	SF3B6	99	95.041	ENSBTAG00000049128	-	97	95.041	Bos_taurus
ENSCAPG00000016302	SF3B6	93	71.930	WBGene00016808	C50D2.5	83	71.930	Caenorhabditis_elegans
ENSCAPG00000016302	SF3B6	99	96.694	ENSCJAG00000007716	SF3B6	97	96.694	Callithrix_jacchus
ENSCAPG00000016302	SF3B6	99	96.694	ENSCAFG00000003957	SF3B6	97	96.694	Canis_familiaris
ENSCAPG00000016302	SF3B6	99	96.694	ENSCAFG00020025576	SF3B6	97	96.694	Canis_lupus_dingo
ENSCAPG00000016302	SF3B6	99	96.694	ENSCHIG00000009902	SF3B6	97	96.694	Capra_hircus
ENSCAPG00000016302	SF3B6	99	96.694	ENSTSYG00000013978	SF3B6	97	96.694	Carlito_syrichta
ENSCAPG00000016302	SF3B6	99	96.694	ENSCPOG00000008016	SF3B6	97	97.479	Cavia_porcellus
ENSCAPG00000016302	SF3B6	99	96.694	ENSCCAG00000036653	SF3B6	97	96.694	Cebus_capucinus
ENSCAPG00000016302	SF3B6	98	90.833	ENSCCAG00000018894	-	93	90.833	Cebus_capucinus
ENSCAPG00000016302	SF3B6	99	96.694	ENSCATG00000030936	SF3B6	97	96.694	Cercocebus_atys
ENSCAPG00000016302	SF3B6	99	96.694	ENSCLAG00000014512	SF3B6	94	100.000	Chinchilla_lanigera
ENSCAPG00000016302	SF3B6	99	96.694	ENSCSAG00000008390	SF3B6	97	96.694	Chlorocebus_sabaeus
ENSCAPG00000016302	SF3B6	99	96.694	ENSCHOG00000000689	SF3B6	97	96.694	Choloepus_hoffmanni
ENSCAPG00000016302	SF3B6	96	75.214	ENSCHOG00000013886	-	93	75.214	Choloepus_hoffmanni
ENSCAPG00000016302	SF3B6	99	96.694	ENSCPBG00000020042	SF3B6	97	96.694	Chrysemys_picta_bellii
ENSCAPG00000016302	SF3B6	98	77.311	ENSCING00000012689	-	94	77.311	Ciona_intestinalis
ENSCAPG00000016302	SF3B6	99	96.694	ENSCANG00000030559	SF3B6	97	96.694	Colobus_angolensis_palliatus
ENSCAPG00000016302	SF3B6	99	96.694	ENSCGRG00001014595	Sf3b6	99	98.305	Cricetulus_griseus_chok1gshd
ENSCAPG00000016302	SF3B6	99	96.694	ENSCGRG00000005272	Sf3b6	99	98.305	Cricetulus_griseus_crigri
ENSCAPG00000016302	SF3B6	99	94.215	ENSCSEG00000019017	sf3b6	97	94.215	Cynoglossus_semilaevis
ENSCAPG00000016302	SF3B6	99	95.868	ENSCVAG00000005055	sf3b6	97	95.868	Cyprinodon_variegatus
ENSCAPG00000016302	SF3B6	99	96.694	ENSDARG00000009753	sf3b6	97	96.694	Danio_rerio
ENSCAPG00000016302	SF3B6	99	96.694	ENSDNOG00000007148	SF3B6	97	96.694	Dasypus_novemcinctus
ENSCAPG00000016302	SF3B6	100	79.365	ENSDORG00000027390	-	98	79.365	Dipodomys_ordii
ENSCAPG00000016302	SF3B6	100	79.365	ENSDORG00000029761	-	98	79.365	Dipodomys_ordii
ENSCAPG00000016302	SF3B6	99	96.694	ENSDORG00000009772	Sf3b6	97	96.694	Dipodomys_ordii
ENSCAPG00000016302	SF3B6	91	78.378	FBgn0035692	Sf3b6	92	78.378	Drosophila_melanogaster
ENSCAPG00000016302	SF3B6	94	92.174	ENSEBUG00000004424	sf3b6	91	92.174	Eptatretus_burgeri
ENSCAPG00000016302	SF3B6	99	85.124	ENSEASG00005008061	-	97	85.124	Equus_asinus_asinus
ENSCAPG00000016302	SF3B6	99	96.694	ENSEASG00005009993	SF3B6	97	96.694	Equus_asinus_asinus
ENSCAPG00000016302	SF3B6	78	82.105	ENSECAG00000027755	-	81	82.105	Equus_caballus
ENSCAPG00000016302	SF3B6	80	91.753	ENSECAG00000015618	SF3B6	89	91.753	Equus_caballus
ENSCAPG00000016302	SF3B6	99	95.041	ENSELUG00000010379	sf3b6	97	95.041	Esox_lucius
ENSCAPG00000016302	SF3B6	99	96.694	ENSFCAG00000031365	SF3B6	97	96.694	Felis_catus
ENSCAPG00000016302	SF3B6	99	96.694	ENSFALG00000001651	SF3B6	97	96.694	Ficedula_albicollis
ENSCAPG00000016302	SF3B6	99	96.694	ENSFDAG00000007864	SF3B6	97	96.694	Fukomys_damarensis
ENSCAPG00000016302	SF3B6	99	95.868	ENSFHEG00000000685	sf3b6	97	95.868	Fundulus_heteroclitus
ENSCAPG00000016302	SF3B6	99	94.215	ENSGMOG00000005123	sf3b6	97	94.215	Gadus_morhua
ENSCAPG00000016302	SF3B6	75	100.000	ENSGALG00000016501	SF3B6	100	100.000	Gallus_gallus
ENSCAPG00000016302	SF3B6	99	95.041	ENSGAFG00000009334	sf3b6	97	95.041	Gambusia_affinis
ENSCAPG00000016302	SF3B6	99	94.215	ENSGACG00000004803	sf3b6	97	94.215	Gasterosteus_aculeatus
ENSCAPG00000016302	SF3B6	99	96.694	ENSGAGG00000012240	SF3B6	97	96.694	Gopherus_agassizii
ENSCAPG00000016302	SF3B6	99	96.694	ENSGGOG00000040806	SF3B6	97	96.694	Gorilla_gorilla
ENSCAPG00000016302	SF3B6	99	95.041	ENSHBUG00000012556	sf3b6	97	95.041	Haplochromis_burtoni
ENSCAPG00000016302	SF3B6	99	96.694	ENSHGLG00000014895	SF3B14	97	96.694	Heterocephalus_glaber_female
ENSCAPG00000016302	SF3B6	99	96.694	ENSHGLG00100008639	SF3B14	97	96.694	Heterocephalus_glaber_male
ENSCAPG00000016302	SF3B6	99	95.868	ENSHCOG00000019962	sf3b6	97	95.868	Hippocampus_comes
ENSCAPG00000016302	SF3B6	99	96.694	ENSIPUG00000023800	sf3b6	97	96.694	Ictalurus_punctatus
ENSCAPG00000016302	SF3B6	99	96.694	ENSJJAG00000021819	Sf3b6	97	96.694	Jaculus_jaculus
ENSCAPG00000016302	SF3B6	99	95.041	ENSKMAG00000004000	sf3b6	97	95.041	Kryptolebias_marmoratus
ENSCAPG00000016302	SF3B6	99	95.041	ENSLBEG00000022937	sf3b6	97	95.041	Labrus_bergylta
ENSCAPG00000016302	SF3B6	99	96.694	ENSLACG00000014326	SF3B6	97	96.694	Latimeria_chalumnae
ENSCAPG00000016302	SF3B6	99	96.694	ENSLOCG00000016481	sf3b6	97	96.694	Lepisosteus_oculatus
ENSCAPG00000016302	SF3B6	99	96.694	ENSLAFG00000029423	SF3B6	97	96.694	Loxodonta_africana
ENSCAPG00000016302	SF3B6	99	96.694	ENSMFAG00000038178	SF3B6	97	96.694	Macaca_fascicularis
ENSCAPG00000016302	SF3B6	99	96.694	ENSMMUG00000001282	SF3B6	97	96.694	Macaca_mulatta
ENSCAPG00000016302	SF3B6	99	96.694	ENSMNEG00000029050	SF3B6	97	96.694	Macaca_nemestrina
ENSCAPG00000016302	SF3B6	99	96.694	ENSMLEG00000019896	SF3B6	97	96.694	Mandrillus_leucophaeus
ENSCAPG00000016302	SF3B6	76	92.473	ENSMAMG00000007713	sf3b6	85	92.473	Mastacembelus_armatus
ENSCAPG00000016302	SF3B6	99	95.041	ENSMZEG00005003557	sf3b6	97	95.041	Maylandia_zebra
ENSCAPG00000016302	SF3B6	99	96.694	ENSMGAG00000014057	SF3B6	97	96.694	Meleagris_gallopavo
ENSCAPG00000016302	SF3B6	99	96.694	ENSMAUG00000000586	-	97	96.694	Mesocricetus_auratus
ENSCAPG00000016302	SF3B6	99	96.694	ENSMICG00000032874	SF3B6	97	96.694	Microcebus_murinus
ENSCAPG00000016302	SF3B6	99	96.694	ENSMOCG00000014338	Sf3b6	97	96.694	Microtus_ochrogaster
ENSCAPG00000016302	SF3B6	99	95.868	ENSMMOG00000015653	sf3b6	97	95.868	Mola_mola
ENSCAPG00000016302	SF3B6	99	89.256	ENSMODG00000002144	SF3B6	97	89.256	Monodelphis_domestica
ENSCAPG00000016302	SF3B6	99	95.868	ENSMALG00000019642	sf3b6	65	95.868	Monopterus_albus
ENSCAPG00000016302	SF3B6	99	96.694	MGP_CAROLIEiJ_G0017590	Sf3b6	97	96.694	Mus_caroli
ENSCAPG00000016302	SF3B6	99	96.694	ENSMUSG00000037361	Sf3b6	100	97.368	Mus_musculus
ENSCAPG00000016302	SF3B6	99	96.694	MGP_PahariEiJ_G0029348	Sf3b6	97	96.694	Mus_pahari
ENSCAPG00000016302	SF3B6	99	96.694	MGP_SPRETEiJ_G0018434	Sf3b6	97	96.694	Mus_spretus
ENSCAPG00000016302	SF3B6	99	96.694	ENSMPUG00000013957	SF3B6	97	96.694	Mustela_putorius_furo
ENSCAPG00000016302	SF3B6	99	96.694	ENSMLUG00000002473	SF3B6	97	96.694	Myotis_lucifugus
ENSCAPG00000016302	SF3B6	99	96.694	ENSNGAG00000020256	Sf3b6	97	96.694	Nannospalax_galili
ENSCAPG00000016302	SF3B6	99	95.041	ENSNBRG00000018244	sf3b6	97	95.041	Neolamprologus_brichardi
ENSCAPG00000016302	SF3B6	99	96.694	ENSNLEG00000000815	-	97	96.694	Nomascus_leucogenys
ENSCAPG00000016302	SF3B6	89	100.000	ENSODEG00000009547	SF3B6	92	100.000	Octodon_degus
ENSCAPG00000016302	SF3B6	99	95.041	ENSONIG00000001219	sf3b6	97	95.041	Oreochromis_niloticus
ENSCAPG00000016302	SF3B6	99	96.694	ENSOANG00000007627	SF3B6	97	96.694	Ornithorhynchus_anatinus
ENSCAPG00000016302	SF3B6	99	96.694	ENSOCUG00000022008	SF3B6	97	96.694	Oryctolagus_cuniculus
ENSCAPG00000016302	SF3B6	99	95.041	ENSORLG00000015955	sf3b6	97	95.041	Oryzias_latipes
ENSCAPG00000016302	SF3B6	99	95.041	ENSORLG00020005875	sf3b6	97	95.041	Oryzias_latipes_hni
ENSCAPG00000016302	SF3B6	99	95.041	ENSORLG00015001347	sf3b6	97	95.041	Oryzias_latipes_hsok
ENSCAPG00000016302	SF3B6	99	95.041	ENSOMEG00000014506	sf3b6	97	95.041	Oryzias_melastigma
ENSCAPG00000016302	SF3B6	99	96.694	ENSOGAG00000004468	SF3B6	97	96.694	Otolemur_garnettii
ENSCAPG00000016302	SF3B6	99	96.694	ENSOARG00000017819	SF3B6	97	96.694	Ovis_aries
ENSCAPG00000016302	SF3B6	99	96.694	ENSPPAG00000027816	SF3B6	97	96.694	Pan_paniscus
ENSCAPG00000016302	SF3B6	99	96.694	ENSPPRG00000023257	SF3B6	97	96.694	Panthera_pardus
ENSCAPG00000016302	SF3B6	99	96.694	ENSPTIG00000013322	SF3B6	97	96.694	Panthera_tigris_altaica
ENSCAPG00000016302	SF3B6	99	96.694	ENSPTRG00000011709	SF3B6	97	96.694	Pan_troglodytes
ENSCAPG00000016302	SF3B6	99	96.694	ENSPANG00000021963	SF3B6	97	96.694	Papio_anubis
ENSCAPG00000016302	SF3B6	99	96.694	ENSPKIG00000012311	sf3b6	97	96.694	Paramormyrops_kingsleyae
ENSCAPG00000016302	SF3B6	94	100.000	ENSPSIG00000017115	SF3B6	100	100.000	Pelodiscus_sinensis
ENSCAPG00000016302	SF3B6	76	92.473	ENSPMGG00000014621	sf3b6	78	92.473	Periophthalmus_magnuspinnatus
ENSCAPG00000016302	SF3B6	99	96.694	ENSPEMG00000010308	Sf3b6	97	99.138	Peromyscus_maniculatus_bairdii
ENSCAPG00000016302	SF3B6	96	88.034	ENSPMAG00000006008	sf3b6	94	88.034	Petromyzon_marinus
ENSCAPG00000016302	SF3B6	99	96.694	ENSPCIG00000022128	-	97	96.694	Phascolarctos_cinereus
ENSCAPG00000016302	SF3B6	98	75.000	ENSPCIG00000015858	-	96	75.000	Phascolarctos_cinereus
ENSCAPG00000016302	SF3B6	99	95.041	ENSPFOG00000012494	sf3b6	97	95.041	Poecilia_formosa
ENSCAPG00000016302	SF3B6	99	95.041	ENSPLAG00000020460	sf3b6	97	95.041	Poecilia_latipinna
ENSCAPG00000016302	SF3B6	99	95.041	ENSPMEG00000004426	sf3b6	97	95.041	Poecilia_mexicana
ENSCAPG00000016302	SF3B6	99	96.694	ENSPPYG00000012603	SF3B6	97	96.694	Pongo_abelii
ENSCAPG00000016302	SF3B6	99	96.694	ENSPVAG00000011346	SF3B6	97	96.694	Pteropus_vampyrus
ENSCAPG00000016302	SF3B6	99	95.041	ENSPNYG00000021832	sf3b6	97	95.041	Pundamilia_nyererei
ENSCAPG00000016302	SF3B6	99	96.694	ENSPNAG00000008845	sf3b6	97	96.694	Pygocentrus_nattereri
ENSCAPG00000016302	SF3B6	99	80.992	ENSRNOG00000046172	Sf3b6	97	80.992	Rattus_norvegicus
ENSCAPG00000016302	SF3B6	99	96.694	ENSRBIG00000039598	SF3B6	96	100.000	Rhinopithecus_bieti
ENSCAPG00000016302	SF3B6	99	96.694	ENSRROG00000011368	SF3B6	97	96.694	Rhinopithecus_roxellana
ENSCAPG00000016302	SF3B6	99	96.694	ENSSBOG00000002914	SF3B6	97	96.694	Saimiri_boliviensis_boliviensis
ENSCAPG00000016302	SF3B6	99	96.694	ENSSFOG00015014370	sf3b6	97	96.694	Scleropages_formosus
ENSCAPG00000016302	SF3B6	99	95.041	ENSSMAG00000004566	sf3b6	97	95.041	Scophthalmus_maximus
ENSCAPG00000016302	SF3B6	99	95.041	ENSSDUG00000006538	sf3b6	97	95.041	Seriola_dumerili
ENSCAPG00000016302	SF3B6	99	95.041	ENSSLDG00000004494	sf3b6	97	95.041	Seriola_lalandi_dorsalis
ENSCAPG00000016302	SF3B6	99	96.694	ENSSARG00000011902	-	97	96.694	Sorex_araneus
ENSCAPG00000016302	SF3B6	99	96.694	ENSSPUG00000014919	SF3B6	97	96.694	Sphenodon_punctatus
ENSCAPG00000016302	SF3B6	99	95.041	ENSSPAG00000013201	sf3b6	97	95.041	Stegastes_partitus
ENSCAPG00000016302	SF3B6	99	96.694	ENSSSCG00000008587	SF3B6	97	96.694	Sus_scrofa
ENSCAPG00000016302	SF3B6	99	96.694	ENSTGUG00000013191	SF3B6	97	96.694	Taeniopygia_guttata
ENSCAPG00000016302	SF3B6	99	95.041	ENSTRUG00000025286	sf3b6	97	95.041	Takifugu_rubripes
ENSCAPG00000016302	SF3B6	99	95.041	ENSTNIG00000009719	sf3b6	97	95.041	Tetraodon_nigroviridis
ENSCAPG00000016302	SF3B6	94	100.000	ENSTBEG00000012532	SF3B6	100	100.000	Tupaia_belangeri
ENSCAPG00000016302	SF3B6	94	100.000	ENSTTRG00000013430	SF3B6	100	100.000	Tursiops_truncatus
ENSCAPG00000016302	SF3B6	99	96.694	ENSUAMG00000025329	SF3B6	97	96.694	Ursus_americanus
ENSCAPG00000016302	SF3B6	99	78.689	ENSUAMG00000000978	-	97	78.689	Ursus_americanus
ENSCAPG00000016302	SF3B6	99	96.694	ENSUMAG00000022835	SF3B6	97	96.694	Ursus_maritimus
ENSCAPG00000016302	SF3B6	94	100.000	ENSVPAG00000005546	SF3B6	100	100.000	Vicugna_pacos
ENSCAPG00000016302	SF3B6	99	96.694	ENSVVUG00000010874	SF3B6	97	96.694	Vulpes_vulpes
ENSCAPG00000016302	SF3B6	99	95.868	ENSXETG00000018204	sf3b6	97	95.868	Xenopus_tropicalis
ENSCAPG00000016302	SF3B6	84	81.651	ENSXCOG00000008477	sf3b6	84	81.651	Xiphophorus_couchianus
ENSCAPG00000016302	SF3B6	99	95.041	ENSXMAG00000010747	sf3b6	97	95.041	Xiphophorus_maculatus