EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016340 (Gene tree)
Gene ID: -
Gene Symbol: SLBP
Alias: HBP
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 9765 bases
Position: chrAVPZ01000167.1:29940-39704
Accession: 10904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016455	SLBP_RNA_bind	PF15247.6	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020247	SLBP-201	531	-	ENSCAPP00000016455	176 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016340	SLBP	100	86.188	ENSG00000163950	SLBP	78	85.083	Homo_sapiens
ENSCAPG00000016340	SLBP	100	88.950	ENSAMEG00000016915	SLBP	83	88.950	Ailuropoda_melanoleuca
ENSCAPG00000016340	SLBP	85	58.788	ENSACIG00000022308	slbp	61	56.250	Amphilophus_citrinellus
ENSCAPG00000016340	SLBP	89	51.977	ENSATEG00000016358	slbp	50	53.521	Anabas_testudineus
ENSCAPG00000016340	SLBP	100	76.374	ENSAPLG00000015989	-	83	74.725	Anas_platyrhynchos
ENSCAPG00000016340	SLBP	100	85.635	ENSANAG00000034769	SLBP	76	84.530	Aotus_nancymaae
ENSCAPG00000016340	SLBP	84	61.818	ENSAMXG00000014527	slbp	62	60.355	Astyanax_mexicanus
ENSCAPG00000016340	SLBP	100	86.740	ENSBTAG00000001328	SLBP	66	86.740	Bos_taurus
ENSCAPG00000016340	SLBP	100	83.425	ENSCJAG00000001790	SLBP	75	83.425	Callithrix_jacchus
ENSCAPG00000016340	SLBP	100	88.398	ENSCAFG00000015016	SLBP	66	88.398	Canis_familiaris
ENSCAPG00000016340	SLBP	100	88.398	ENSCAFG00020012334	SLBP	66	88.398	Canis_lupus_dingo
ENSCAPG00000016340	SLBP	100	86.740	ENSCHIG00000019364	SLBP	69	86.740	Capra_hircus
ENSCAPG00000016340	SLBP	100	85.635	ENSTSYG00000000376	SLBP	76	84.530	Carlito_syrichta
ENSCAPG00000016340	SLBP	100	95.628	ENSCPOG00000000031	SLBP	67	95.628	Cavia_porcellus
ENSCAPG00000016340	SLBP	60	82.857	ENSCCAG00000026134	SLBP	62	70.635	Cebus_capucinus
ENSCAPG00000016340	SLBP	100	86.188	ENSCATG00000029173	SLBP	76	85.083	Cercocebus_atys
ENSCAPG00000016340	SLBP	100	93.370	ENSCLAG00000008157	SLBP	68	93.370	Chinchilla_lanigera
ENSCAPG00000016340	SLBP	100	63.978	ENSCSAG00000015628	SLBP	66	63.978	Chlorocebus_sabaeus
ENSCAPG00000016340	SLBP	100	79.121	ENSCPBG00000000746	SLBP	65	78.571	Chrysemys_picta_bellii
ENSCAPG00000016340	SLBP	100	85.635	ENSCANG00000041008	SLBP	83	84.530	Colobus_angolensis_palliatus
ENSCAPG00000016340	SLBP	100	90.055	ENSCGRG00001009760	-	66	90.055	Cricetulus_griseus_chok1gshd
ENSCAPG00000016340	SLBP	100	88.950	ENSCGRG00001012991	-	67	88.950	Cricetulus_griseus_chok1gshd
ENSCAPG00000016340	SLBP	100	90.055	ENSCGRG00000004506	Slbp	66	90.055	Cricetulus_griseus_crigri
ENSCAPG00000016340	SLBP	86	52.601	ENSCSEG00000020337	-	61	52.941	Cynoglossus_semilaevis
ENSCAPG00000016340	SLBP	84	57.647	ENSDARG00000100558	slbp	51	66.667	Danio_rerio
ENSCAPG00000016340	SLBP	100	83.425	ENSDNOG00000047539	SLBP	65	83.425	Dasypus_novemcinctus
ENSCAPG00000016340	SLBP	100	90.055	ENSDORG00000003028	Slbp	84	90.055	Dipodomys_ordii
ENSCAPG00000016340	SLBP	66	87.603	ENSETEG00000004641	SLBP	61	86.620	Echinops_telfairi
ENSCAPG00000016340	SLBP	100	88.950	ENSEASG00005022714	SLBP	94	88.950	Equus_asinus_asinus
ENSCAPG00000016340	SLBP	86	52.381	ENSELUG00000012854	slbp	61	50.000	Esox_lucius
ENSCAPG00000016340	SLBP	100	89.503	ENSFCAG00000000169	SLBP	78	89.503	Felis_catus
ENSCAPG00000016340	SLBP	100	74.176	ENSFALG00000010003	-	66	72.527	Ficedula_albicollis
ENSCAPG00000016340	SLBP	59	62.037	ENSFALG00000009994	-	51	64.356	Ficedula_albicollis
ENSCAPG00000016340	SLBP	100	92.265	ENSFDAG00000007592	SLBP	71	92.265	Fukomys_damarensis
ENSCAPG00000016340	SLBP	84	50.000	ENSFHEG00000007497	slbp	51	51.493	Fundulus_heteroclitus
ENSCAPG00000016340	SLBP	60	74.775	ENSGMOG00000015352	slbp	71	74.775	Gadus_morhua
ENSCAPG00000016340	SLBP	100	75.275	ENSGALG00000015712	SLBP	66	73.626	Gallus_gallus
ENSCAPG00000016340	SLBP	85	52.571	ENSGAFG00000019577	slbp	52	57.664	Gambusia_affinis
ENSCAPG00000016340	SLBP	78	79.720	ENSGAGG00000012096	SLBP	52	79.845	Gopherus_agassizii
ENSCAPG00000016340	SLBP	100	86.188	ENSGGOG00000003167	SLBP	76	85.083	Gorilla_gorilla
ENSCAPG00000016340	SLBP	92	86.826	ENSHGLG00000010461	-	65	87.097	Heterocephalus_glaber_female
ENSCAPG00000016340	SLBP	100	92.265	ENSHGLG00000005955	-	76	92.265	Heterocephalus_glaber_female
ENSCAPG00000016340	SLBP	90	87.730	ENSHGLG00000008313	-	64	87.742	Heterocephalus_glaber_female
ENSCAPG00000016340	SLBP	92	86.826	ENSHGLG00100014906	-	65	87.097	Heterocephalus_glaber_male
ENSCAPG00000016340	SLBP	100	92.265	ENSHGLG00100014018	-	66	92.265	Heterocephalus_glaber_male
ENSCAPG00000016340	SLBP	90	88.957	ENSHGLG00100010510	-	64	89.032	Heterocephalus_glaber_male
ENSCAPG00000016340	SLBP	100	90.608	ENSSTOG00000003262	SLBP	66	90.608	Ictidomys_tridecemlineatus
ENSCAPG00000016340	SLBP	100	90.608	ENSJJAG00000020549	-	66	90.608	Jaculus_jaculus
ENSCAPG00000016340	SLBP	100	85.083	ENSJJAG00000002394	-	65	85.083	Jaculus_jaculus
ENSCAPG00000016340	SLBP	84	52.601	ENSKMAG00000008187	slbp	60	52.632	Kryptolebias_marmoratus
ENSCAPG00000016340	SLBP	89	50.847	ENSLBEG00000024709	slbp	62	47.399	Labrus_bergylta
ENSCAPG00000016340	SLBP	95	57.955	ENSLACG00000014623	SLBP	62	57.386	Latimeria_chalumnae
ENSCAPG00000016340	SLBP	93	56.111	ENSLOCG00000011027	slbp	61	54.348	Lepisosteus_oculatus
ENSCAPG00000016340	SLBP	78	88.732	ENSLAFG00000012933	SLBP	61	88.732	Loxodonta_africana
ENSCAPG00000016340	SLBP	100	86.188	ENSMFAG00000030130	SLBP	77	85.083	Macaca_fascicularis
ENSCAPG00000016340	SLBP	100	86.188	ENSMMUG00000032303	SLBP	80	85.083	Macaca_mulatta
ENSCAPG00000016340	SLBP	100	61.364	ENSMNEG00000008082	SLBP	56	60.227	Macaca_nemestrina
ENSCAPG00000016340	SLBP	100	86.188	ENSMLEG00000024639	SLBP	74	85.083	Mandrillus_leucophaeus
ENSCAPG00000016340	SLBP	100	75.275	ENSMGAG00000013085	SLBP	84	73.626	Meleagris_gallopavo
ENSCAPG00000016340	SLBP	100	90.055	ENSMAUG00000009490	Slbp	66	90.055	Mesocricetus_auratus
ENSCAPG00000016340	SLBP	100	83.425	ENSMICG00000014244	SLBP	76	82.320	Microcebus_murinus
ENSCAPG00000016340	SLBP	100	88.398	ENSMOCG00000015826	Slbp	65	88.398	Microtus_ochrogaster
ENSCAPG00000016340	SLBP	89	53.939	ENSMMOG00000010181	slbp	61	49.068	Mola_mola
ENSCAPG00000016340	SLBP	100	81.768	ENSMODG00000004304	SLBP	69	81.768	Monodelphis_domestica
ENSCAPG00000016340	SLBP	100	90.608	MGP_CAROLIEiJ_G0027117	Slbp	66	90.608	Mus_caroli
ENSCAPG00000016340	SLBP	100	91.160	ENSMUSG00000004642	Slbp	66	91.160	Mus_musculus
ENSCAPG00000016340	SLBP	100	91.160	MGP_PahariEiJ_G0016901	Slbp	66	91.160	Mus_pahari
ENSCAPG00000016340	SLBP	100	91.160	MGP_SPRETEiJ_G0028113	Slbp	66	91.160	Mus_spretus
ENSCAPG00000016340	SLBP	100	88.398	ENSMPUG00000011139	SLBP	93	88.398	Mustela_putorius_furo
ENSCAPG00000016340	SLBP	100	86.264	ENSMLUG00000004425	SLBP	78	86.264	Myotis_lucifugus
ENSCAPG00000016340	SLBP	100	89.503	ENSNGAG00000020799	Slbp	66	89.503	Nannospalax_galili
ENSCAPG00000016340	SLBP	76	58.904	ENSNBRG00000006044	-	50	61.194	Neolamprologus_brichardi
ENSCAPG00000016340	SLBP	100	86.188	ENSNLEG00000000048	SLBP	76	85.083	Nomascus_leucogenys
ENSCAPG00000016340	SLBP	78	85.915	ENSMEUG00000002501	SLBP	80	85.915	Notamacropus_eugenii
ENSCAPG00000016340	SLBP	100	92.818	ENSODEG00000012641	SLBP	69	92.818	Octodon_degus
ENSCAPG00000016340	SLBP	100	82.320	ENSOANG00000014243	SLBP	79	82.320	Ornithorhynchus_anatinus
ENSCAPG00000016340	SLBP	87	53.571	ENSORLG00000024887	-	61	49.390	Oryzias_latipes
ENSCAPG00000016340	SLBP	87	53.571	ENSORLG00020007798	slbp	63	48.795	Oryzias_latipes_hni
ENSCAPG00000016340	SLBP	87	53.571	ENSORLG00015016656	slbp	63	48.795	Oryzias_latipes_hsok
ENSCAPG00000016340	SLBP	87	52.381	ENSOMEG00000010818	slbp	65	49.711	Oryzias_melastigma
ENSCAPG00000016340	SLBP	100	83.978	ENSOGAG00000009750	SLBP	65	82.873	Otolemur_garnettii
ENSCAPG00000016340	SLBP	100	86.188	ENSOARG00000016090	SLBP	83	86.188	Ovis_aries
ENSCAPG00000016340	SLBP	100	86.188	ENSPPAG00000033300	SLBP	76	85.083	Pan_paniscus
ENSCAPG00000016340	SLBP	100	88.950	ENSPPRG00000016897	SLBP	72	88.950	Panthera_pardus
ENSCAPG00000016340	SLBP	100	89.503	ENSPTIG00000015057	SLBP	94	89.503	Panthera_tigris_altaica
ENSCAPG00000016340	SLBP	100	86.188	ENSPTRG00000015832	SLBP	76	85.083	Pan_troglodytes
ENSCAPG00000016340	SLBP	100	86.188	ENSPANG00000004932	SLBP	76	85.083	Papio_anubis
ENSCAPG00000016340	SLBP	94	54.396	ENSPKIG00000006183	slbp	62	53.297	Paramormyrops_kingsleyae
ENSCAPG00000016340	SLBP	86	54.037	ENSPMGG00000017684	-	53	76.923	Periophthalmus_magnuspinnatus
ENSCAPG00000016340	SLBP	100	90.055	ENSPEMG00000018369	Slbp	66	90.055	Peromyscus_maniculatus_bairdii
ENSCAPG00000016340	SLBP	52	61.616	ENSPMAG00000003029	SLBP	82	65.217	Petromyzon_marinus
ENSCAPG00000016340	SLBP	100	83.978	ENSPCIG00000013575	SLBP	52	83.978	Phascolarctos_cinereus
ENSCAPG00000016340	SLBP	85	51.724	ENSPLAG00000008300	slbp	51	56.934	Poecilia_latipinna
ENSCAPG00000016340	SLBP	100	85.635	ENSPPYG00000014529	SLBP	65	84.530	Pongo_abelii
ENSCAPG00000016340	SLBP	100	84.530	ENSPCOG00000017399	SLBP	76	83.425	Propithecus_coquereli
ENSCAPG00000016340	SLBP	100	86.740	ENSPVAG00000002807	SLBP	69	86.740	Pteropus_vampyrus
ENSCAPG00000016340	SLBP	70	61.481	ENSPNAG00000018503	slbp	61	59.036	Pygocentrus_nattereri
ENSCAPG00000016340	SLBP	100	90.608	ENSRNOG00000037162	Slbp	66	90.608	Rattus_norvegicus
ENSCAPG00000016340	SLBP	100	86.188	ENSRBIG00000039159	SLBP	76	85.083	Rhinopithecus_bieti
ENSCAPG00000016340	SLBP	100	86.188	ENSRROG00000030081	SLBP	82	85.083	Rhinopithecus_roxellana
ENSCAPG00000016340	SLBP	100	83.425	ENSSBOG00000033897	SLBP	94	82.320	Saimiri_boliviensis_boliviensis
ENSCAPG00000016340	SLBP	100	83.425	ENSSHAG00000013939	SLBP	61	83.425	Sarcophilus_harrisii
ENSCAPG00000016340	SLBP	91	58.101	ENSSFOG00015019429	slbp	63	53.371	Scleropages_formosus
ENSCAPG00000016340	SLBP	100	70.330	ENSSPUG00000016007	SLBP	68	68.508	Sphenodon_punctatus
ENSCAPG00000016340	SLBP	100	86.188	ENSSSCG00000008676	SLBP	66	86.188	Sus_scrofa
ENSCAPG00000016340	SLBP	100	74.725	ENSTGUG00000010626	-	69	73.077	Taeniopygia_guttata
ENSCAPG00000016340	SLBP	78	85.816	ENSTTRG00000004010	-	80	85.816	Tursiops_truncatus
ENSCAPG00000016340	SLBP	100	87.293	ENSTTRG00000010901	-	84	87.293	Tursiops_truncatus
ENSCAPG00000016340	SLBP	100	87.845	ENSUAMG00000012990	SLBP	75	87.845	Ursus_americanus
ENSCAPG00000016340	SLBP	100	87.845	ENSUMAG00000006119	SLBP	94	87.845	Ursus_maritimus
ENSCAPG00000016340	SLBP	100	87.293	ENSVVUG00000015578	-	66	87.293	Vulpes_vulpes
ENSCAPG00000016340	SLBP	95	56.395	ENSXETG00000003876	slbp	61	61.850	Xenopus_tropicalis