EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016359 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 14693 bases
Position: chrAVPZ01000024.1:319037-333729
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016479	Isy1	PF06246.12	2.2e-66	1	1
ENSCAPP00000016482	Isy1	PF06246.12	7.5e-63	1	2
ENSCAPP00000016482	Isy1	PF06246.12	7.5e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020272	-	732	-	ENSCAPP00000016479	243 (aa)	-	-
ENSCAPT00000020275	-	705	-	ENSCAPP00000016482	234 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016359	-	99	72.662	ENSG00000261796	ISY1-RAB43	84	72.662	Homo_sapiens
ENSCAPG00000016359	-	100	72.760	ENSG00000240682	ISY1	90	87.500	Homo_sapiens
ENSCAPG00000016359	-	99	73.381	ENSAMEG00000015341	-	84	73.381	Ailuropoda_melanoleuca
ENSCAPG00000016359	-	64	71.676	ENSACIG00000014723	isy1	70	73.563	Amphilophus_citrinellus
ENSCAPG00000016359	-	99	64.727	ENSAOCG00000007147	isy1	98	64.727	Amphiprion_ocellaris
ENSCAPG00000016359	-	93	74.194	ENSAPEG00000021883	isy1	98	57.792	Amphiprion_percula
ENSCAPG00000016359	-	62	67.516	ENSATEG00000009521	isy1	68	67.516	Anabas_testudineus
ENSCAPG00000016359	-	98	61.654	ENSAPLG00000014136	-	96	61.654	Anas_platyrhynchos
ENSCAPG00000016359	-	91	67.451	ENSACAG00000013166	-	99	67.451	Anolis_carolinensis
ENSCAPG00000016359	-	100	72.760	ENSANAG00000027120	-	98	72.760	Aotus_nancymaae
ENSCAPG00000016359	-	98	59.551	ENSACLG00000014430	isy1	96	59.559	Astatotilapia_calliptera
ENSCAPG00000016359	-	99	67.266	ENSAMXG00000005423	isy1	98	67.266	Astyanax_mexicanus
ENSCAPG00000016359	-	99	70.397	ENSBTAG00000030915	ISY1	98	71.480	Bos_taurus
ENSCAPG00000016359	-	93	40.000	WBGene00009966	isy-1	97	40.000	Caenorhabditis_elegans
ENSCAPG00000016359	-	100	73.118	ENSCJAG00000017419	-	98	73.118	Callithrix_jacchus
ENSCAPG00000016359	-	100	73.835	ENSCAFG00000004333	ISY1	98	73.835	Canis_familiaris
ENSCAPG00000016359	-	100	73.835	ENSCAFG00020004867	-	98	73.835	Canis_lupus_dingo
ENSCAPG00000016359	-	99	71.841	ENSCHIG00000008237	-	98	72.202	Capra_hircus
ENSCAPG00000016359	-	100	72.401	ENSTSYG00000013897	-	98	72.401	Carlito_syrichta
ENSCAPG00000016359	-	100	73.835	ENSCPOG00000014735	-	98	73.835	Cavia_porcellus
ENSCAPG00000016359	-	100	73.118	ENSCCAG00000028517	-	98	73.118	Cebus_capucinus
ENSCAPG00000016359	-	100	73.118	ENSCATG00000030672	-	98	73.118	Cercocebus_atys
ENSCAPG00000016359	-	100	73.571	ENSCLAG00000007518	-	98	73.571	Chinchilla_lanigera
ENSCAPG00000016359	-	100	73.118	ENSCSAG00000008798	-	98	73.118	Chlorocebus_sabaeus
ENSCAPG00000016359	-	99	71.168	ENSCPBG00000026346	-	98	71.168	Chrysemys_picta_bellii
ENSCAPG00000016359	-	99	52.612	ENSCING00000000716	-	97	54.044	Ciona_intestinalis
ENSCAPG00000016359	-	99	53.285	ENSCSAVG00000008992	-	97	53.285	Ciona_savignyi
ENSCAPG00000016359	-	100	73.118	ENSCANG00000037761	-	98	73.118	Colobus_angolensis_palliatus
ENSCAPG00000016359	-	100	72.760	ENSCGRG00001003415	Isy1	98	72.760	Cricetulus_griseus_chok1gshd
ENSCAPG00000016359	-	100	72.760	ENSCGRG00000011641	Isy1	98	72.760	Cricetulus_griseus_crigri
ENSCAPG00000016359	-	86	59.322	ENSCSEG00000020382	isy1	92	59.494	Cynoglossus_semilaevis
ENSCAPG00000016359	-	99	63.004	ENSCVAG00000000650	isy1	98	63.004	Cyprinodon_variegatus
ENSCAPG00000016359	-	99	65.468	ENSDARG00000063466	isy1	98	65.468	Danio_rerio
ENSCAPG00000016359	-	100	72.500	ENSDNOG00000002763	-	98	72.500	Dasypus_novemcinctus
ENSCAPG00000016359	-	99	72.924	ENSDORG00000006886	Isy1	100	72.924	Dipodomys_ordii
ENSCAPG00000016359	-	94	48.302	FBgn0037550	CG9667	99	48.092	Drosophila_melanogaster
ENSCAPG00000016359	-	98	71.168	ENSETEG00000017009	-	100	72.263	Echinops_telfairi
ENSCAPG00000016359	-	99	46.122	ENSEBUG00000002888	isy1	96	46.122	Eptatretus_burgeri
ENSCAPG00000016359	-	99	69.314	ENSEASG00005015810	-	97	69.314	Equus_asinus_asinus
ENSCAPG00000016359	-	93	71.756	ENSECAG00000013768	-	86	71.756	Equus_caballus
ENSCAPG00000016359	-	99	64.158	ENSELUG00000000489	isy1	98	64.158	Esox_lucius
ENSCAPG00000016359	-	100	73.835	ENSFCAG00000008664	-	98	73.835	Felis_catus
ENSCAPG00000016359	-	100	65.201	ENSFALG00000014998	-	98	65.201	Ficedula_albicollis
ENSCAPG00000016359	-	99	68.750	ENSFALG00000000023	-	97	69.853	Ficedula_albicollis
ENSCAPG00000016359	-	99	73.022	ENSFDAG00000012661	-	95	73.022	Fukomys_damarensis
ENSCAPG00000016359	-	99	62.774	ENSFHEG00000006776	isy1	98	64.234	Fundulus_heteroclitus
ENSCAPG00000016359	-	79	85.294	ENSGMOG00000005635	isy1	71	85.294	Gadus_morhua
ENSCAPG00000016359	-	99	70.696	ENSGALG00000005012	-	98	70.696	Gallus_gallus
ENSCAPG00000016359	-	97	63.774	ENSGAFG00000019550	isy1	97	63.534	Gambusia_affinis
ENSCAPG00000016359	-	99	61.679	ENSGACG00000003342	isy1	98	62.774	Gasterosteus_aculeatus
ENSCAPG00000016359	-	98	71.111	ENSGAGG00000021274	-	97	69.170	Gopherus_agassizii
ENSCAPG00000016359	-	100	72.760	ENSGGOG00000038733	ISY1	86	87.156	Gorilla_gorilla
ENSCAPG00000016359	-	98	57.455	ENSHGLG00000017889	-	77	57.455	Heterocephalus_glaber_female
ENSCAPG00000016359	-	100	74.101	ENSHGLG00000002576	-	98	74.101	Heterocephalus_glaber_female
ENSCAPG00000016359	-	98	57.455	ENSHGLG00100005531	-	77	57.455	Heterocephalus_glaber_male
ENSCAPG00000016359	-	99	73.818	ENSHGLG00100004254	-	96	73.818	Heterocephalus_glaber_male
ENSCAPG00000016359	-	99	60.967	ENSHCOG00000014775	isy1	97	60.967	Hippocampus_comes
ENSCAPG00000016359	-	99	65.343	ENSIPUG00000011379	Isy1	98	66.065	Ictalurus_punctatus
ENSCAPG00000016359	-	100	72.500	ENSSTOG00000024769	-	98	72.500	Ictidomys_tridecemlineatus
ENSCAPG00000016359	-	77	66.667	ENSJJAG00000009635	Isy1	96	66.667	Jaculus_jaculus
ENSCAPG00000016359	-	99	68.000	ENSLACG00000004490	isy1	98	69.091	Latimeria_chalumnae
ENSCAPG00000016359	-	99	64.748	ENSLOCG00000013988	isy1	98	65.108	Lepisosteus_oculatus
ENSCAPG00000016359	-	100	62.366	ENSLAFG00000004015	-	98	63.441	Loxodonta_africana
ENSCAPG00000016359	-	100	73.118	ENSMFAG00000037074	-	98	73.118	Macaca_fascicularis
ENSCAPG00000016359	-	100	73.118	ENSMMUG00000011580	ISY1-RAB43	98	73.118	Macaca_mulatta
ENSCAPG00000016359	-	100	73.188	ENSMNEG00000043206	ISY1	98	73.188	Macaca_nemestrina
ENSCAPG00000016359	-	100	73.118	ENSMLEG00000033836	-	98	73.118	Mandrillus_leucophaeus
ENSCAPG00000016359	-	99	63.406	ENSMAMG00000009501	isy1	98	63.768	Mastacembelus_armatus
ENSCAPG00000016359	-	99	64.855	ENSMZEG00005012021	isy1	98	64.855	Maylandia_zebra
ENSCAPG00000016359	-	99	69.565	ENSMGAG00000005181	-	98	69.565	Meleagris_gallopavo
ENSCAPG00000016359	-	100	72.760	ENSMAUG00000008793	Isy1	98	72.760	Mesocricetus_auratus
ENSCAPG00000016359	-	99	71.377	ENSMICG00000037547	-	100	71.377	Microcebus_murinus
ENSCAPG00000016359	-	100	73.118	ENSMOCG00000000472	Isy1	98	73.118	Microtus_ochrogaster
ENSCAPG00000016359	-	92	58.113	ENSMMOG00000017810	isy1	91	58.113	Mola_mola
ENSCAPG00000016359	-	100	69.203	ENSMODG00000008387	-	98	69.203	Monodelphis_domestica
ENSCAPG00000016359	-	99	63.899	ENSMALG00000020650	isy1	98	63.899	Monopterus_albus
ENSCAPG00000016359	-	100	73.118	MGP_CAROLIEiJ_G0028619	Isy1	86	97.674	Mus_caroli
ENSCAPG00000016359	-	100	73.118	ENSMUSG00000030056	Isy1	86	97.674	Mus_musculus
ENSCAPG00000016359	-	100	64.469	MGP_PahariEiJ_G0022357	Isy1	98	61.649	Mus_pahari
ENSCAPG00000016359	-	100	73.118	MGP_SPRETEiJ_G0029631	Isy1	86	97.674	Mus_spretus
ENSCAPG00000016359	-	99	72.302	ENSMPUG00000017307	-	93	72.302	Mustela_putorius_furo
ENSCAPG00000016359	-	100	68.817	ENSMLUG00000011804	-	98	68.817	Myotis_lucifugus
ENSCAPG00000016359	-	100	73.477	ENSNGAG00000015207	Isy1	98	73.477	Nannospalax_galili
ENSCAPG00000016359	-	63	71.930	ENSNBRG00000006974	isy1	72	73.099	Neolamprologus_brichardi
ENSCAPG00000016359	-	100	73.118	ENSNLEG00000028747	ISY1	98	73.118	Nomascus_leucogenys
ENSCAPG00000016359	-	71	87.692	ENSMEUG00000008434	-	58	87.692	Notamacropus_eugenii
ENSCAPG00000016359	-	99	72.302	ENSOPRG00000005468	-	84	72.302	Ochotona_princeps
ENSCAPG00000016359	-	99	62.731	ENSODEG00000002067	-	96	63.838	Octodon_degus
ENSCAPG00000016359	-	85	61.066	ENSONIG00000000267	isy1	96	62.295	Oreochromis_niloticus
ENSCAPG00000016359	-	99	60.886	ENSOANG00000013141	-	97	60.886	Ornithorhynchus_anatinus
ENSCAPG00000016359	-	100	73.477	ENSOCUG00000003923	-	98	73.477	Oryctolagus_cuniculus
ENSCAPG00000016359	-	99	62.319	ENSORLG00000013250	isy1	98	62.319	Oryzias_latipes
ENSCAPG00000016359	-	99	61.957	ENSORLG00020020966	isy1	98	61.957	Oryzias_latipes_hni
ENSCAPG00000016359	-	99	62.545	ENSORLG00015017316	isy1	98	61.957	Oryzias_latipes_hsok
ENSCAPG00000016359	-	98	63.370	ENSOMEG00000023905	isy1	97	62.637	Oryzias_melastigma
ENSCAPG00000016359	-	100	73.477	ENSOGAG00000005142	-	98	73.477	Otolemur_garnettii
ENSCAPG00000016359	-	99	72.202	ENSOARG00000003231	-	92	72.202	Ovis_aries
ENSCAPG00000016359	-	100	72.760	ENSPPAG00000042141	-	86	87.156	Pan_paniscus
ENSCAPG00000016359	-	100	73.835	ENSPPRG00000003480	-	98	73.835	Panthera_pardus
ENSCAPG00000016359	-	100	73.835	ENSPTIG00000017919	-	98	73.835	Panthera_tigris_altaica
ENSCAPG00000016359	-	100	68.106	ENSPTRG00000015367	ISY1	86	87.156	Pan_troglodytes
ENSCAPG00000016359	-	100	73.118	ENSPANG00000004750	-	98	73.118	Papio_anubis
ENSCAPG00000016359	-	99	66.426	ENSPKIG00000024592	isy1	98	66.426	Paramormyrops_kingsleyae
ENSCAPG00000016359	-	99	69.818	ENSPSIG00000009384	-	98	69.818	Pelodiscus_sinensis
ENSCAPG00000016359	-	98	54.545	ENSPMGG00000016328	isy1	88	54.545	Periophthalmus_magnuspinnatus
ENSCAPG00000016359	-	100	72.760	ENSPEMG00000005390	Isy1	98	72.760	Peromyscus_maniculatus_bairdii
ENSCAPG00000016359	-	64	67.630	ENSPMAG00000005010	-	97	69.540	Petromyzon_marinus
ENSCAPG00000016359	-	92	87.692	ENSPCIG00000000466	-	57	87.692	Phascolarctos_cinereus
ENSCAPG00000016359	-	56	54.861	ENSPFOG00000010228	isy1	83	56.552	Poecilia_formosa
ENSCAPG00000016359	-	97	64.659	ENSPREG00000015121	isy1	97	66.667	Poecilia_reticulata
ENSCAPG00000016359	-	100	73.118	ENSPPYG00000013424	-	98	73.118	Pongo_abelii
ENSCAPG00000016359	-	99	66.779	ENSPCAG00000009535	-	97	67.785	Procavia_capensis
ENSCAPG00000016359	-	100	62.140	ENSPCOG00000025242	-	96	63.090	Propithecus_coquereli
ENSCAPG00000016359	-	99	66.187	ENSPNAG00000000703	isy1	98	67.266	Pygocentrus_nattereri
ENSCAPG00000016359	-	100	73.381	ENSRNOG00000010021	Isy1	98	73.381	Rattus_norvegicus
ENSCAPG00000016359	-	100	76.562	ENSRBIG00000028747	ISY1	98	76.562	Rhinopithecus_bieti
ENSCAPG00000016359	-	100	73.118	ENSRROG00000032314	ISY1	98	73.118	Rhinopithecus_roxellana
ENSCAPG00000016359	-	100	73.118	ENSSBOG00000029301	-	98	73.118	Saimiri_boliviensis_boliviensis
ENSCAPG00000016359	-	100	69.203	ENSSHAG00000017192	-	98	69.203	Sarcophilus_harrisii
ENSCAPG00000016359	-	99	65.950	ENSSFOG00015001127	isy1	98	65.950	Scleropages_formosus
ENSCAPG00000016359	-	99	62.094	ENSSMAG00000006601	isy1	98	63.309	Scophthalmus_maximus
ENSCAPG00000016359	-	99	63.043	ENSSDUG00000018291	isy1	98	64.493	Seriola_dumerili
ENSCAPG00000016359	-	99	62.681	ENSSLDG00000022252	isy1	98	64.130	Seriola_lalandi_dorsalis
ENSCAPG00000016359	-	56	64.667	ENSSARG00000007648	-	55	64.667	Sorex_araneus
ENSCAPG00000016359	-	99	69.818	ENSSPUG00000018050	-	98	69.818	Sphenodon_punctatus
ENSCAPG00000016359	-	73	66.500	ENSSPAG00000021900	isy1	74	66.500	Stegastes_partitus
ENSCAPG00000016359	-	100	74.101	ENSSSCG00000038900	-	98	74.101	Sus_scrofa
ENSCAPG00000016359	-	76	58.605	ENSTGUG00000003998	-	99	60.930	Taeniopygia_guttata
ENSCAPG00000016359	-	80	61.778	ENSTGUG00000007076	-	97	59.912	Taeniopygia_guttata
ENSCAPG00000016359	-	64	70.520	ENSTRUG00000002546	isy1	93	72.414	Takifugu_rubripes
ENSCAPG00000016359	-	99	62.825	ENSTNIG00000005224	isy1	97	62.825	Tetraodon_nigroviridis
ENSCAPG00000016359	-	61	100.000	ENSTBEG00000006938	-	100	61.364	Tupaia_belangeri
ENSCAPG00000016359	-	99	70.803	ENSTTRG00000015267	-	97	71.174	Tursiops_truncatus
ENSCAPG00000016359	-	100	73.835	ENSVVUG00000018261	-	98	73.835	Vulpes_vulpes
ENSCAPG00000016359	-	99	64.207	ENSXMAG00000012452	isy1	97	65.809	Xiphophorus_maculatus