EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000016517 (Gene tree)
Gene ID: -
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 2868 bases
Position: chrAVPZ01000178.1:27787243-27790110
Accession: 29207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000016680	B3_4	PF03483.17	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000020477	LRRC47-201	1131	-	ENSCAPP00000016680	376 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016517	LRRC47	100	83.598	ENSG00000130764	LRRC47	65	83.862	Homo_sapiens
ENSCAPG00000016517	LRRC47	97	59.783	ENSAPOG00000019553	lrrc47	66	59.309	Acanthochromis_polyacanthus
ENSCAPG00000016517	LRRC47	100	75.000	ENSAMEG00000009152	LRRC47	82	75.000	Ailuropoda_melanoleuca
ENSCAPG00000016517	LRRC47	100	64.721	ENSAPLG00000003167	LRRC47	98	63.395	Anas_platyrhynchos
ENSCAPG00000016517	LRRC47	100	66.489	ENSACAG00000008267	LRRC47	99	66.667	Anolis_carolinensis
ENSCAPG00000016517	LRRC47	100	81.746	ENSANAG00000025576	LRRC47	65	82.011	Aotus_nancymaae
ENSCAPG00000016517	LRRC47	100	75.597	ENSBTAG00000004738	LRRC47	65	76.064	Bos_taurus
ENSCAPG00000016517	LRRC47	100	76.658	ENSCAFG00000019492	LRRC47	64	77.188	Canis_familiaris
ENSCAPG00000016517	LRRC47	100	76.658	ENSCAFG00020009667	LRRC47	65	77.188	Canis_lupus_dingo
ENSCAPG00000016517	LRRC47	100	75.862	ENSCHIG00000022607	LRRC47	65	76.330	Capra_hircus
ENSCAPG00000016517	LRRC47	100	79.894	ENSTSYG00000009326	LRRC47	65	83.069	Carlito_syrichta
ENSCAPG00000016517	LRRC47	100	99.734	ENSCPOG00000014931	LRRC47	62	99.734	Cavia_porcellus
ENSCAPG00000016517	LRRC47	100	82.804	ENSCCAG00000024895	LRRC47	65	83.069	Cebus_capucinus
ENSCAPG00000016517	LRRC47	100	84.656	ENSCATG00000029337	LRRC47	65	84.921	Cercocebus_atys
ENSCAPG00000016517	LRRC47	100	88.830	ENSCLAG00000006093	LRRC47	65	88.830	Chinchilla_lanigera
ENSCAPG00000016517	LRRC47	100	84.921	ENSCSAG00000000727	LRRC47	65	85.185	Chlorocebus_sabaeus
ENSCAPG00000016517	LRRC47	99	63.228	ENSCPBG00000019404	LRRC47	64	61.905	Chrysemys_picta_bellii
ENSCAPG00000016517	LRRC47	100	82.677	ENSCANG00000030701	LRRC47	79	82.940	Colobus_angolensis_palliatus
ENSCAPG00000016517	LRRC47	100	79.787	ENSCGRG00001015159	Lrrc47	58	80.851	Cricetulus_griseus_chok1gshd
ENSCAPG00000016517	LRRC47	100	80.585	ENSCGRG00000017336	Lrrc47	100	80.851	Cricetulus_griseus_crigri
ENSCAPG00000016517	LRRC47	99	57.219	ENSCSEG00000006217	lrrc47	64	57.754	Cynoglossus_semilaevis
ENSCAPG00000016517	LRRC47	99	81.117	ENSDORG00000016594	Lrrc47	99	81.649	Dipodomys_ordii
ENSCAPG00000016517	LRRC47	100	78.100	ENSEASG00005021788	LRRC47	65	77.778	Equus_asinus_asinus
ENSCAPG00000016517	LRRC47	100	77.778	ENSECAG00000022472	LRRC47	59	78.042	Equus_caballus
ENSCAPG00000016517	LRRC47	99	58.915	ENSELUG00000017544	lrrc47	65	59.432	Esox_lucius
ENSCAPG00000016517	LRRC47	92	75.793	ENSFCAG00000011632	LRRC47	61	76.081	Felis_catus
ENSCAPG00000016517	LRRC47	100	64.721	ENSFALG00000009631	LRRC47	85	62.766	Ficedula_albicollis
ENSCAPG00000016517	LRRC47	97	57.337	ENSGMOG00000015674	lrrc47	64	57.609	Gadus_morhua
ENSCAPG00000016517	LRRC47	100	62.698	ENSGALG00000050995	LRRC47	64	60.733	Gallus_gallus
ENSCAPG00000016517	LRRC47	99	57.181	ENSGACG00000005550	lrrc47	65	57.713	Gasterosteus_aculeatus
ENSCAPG00000016517	LRRC47	99	63.228	ENSGAGG00000022584	LRRC47	63	63.395	Gopherus_agassizii
ENSCAPG00000016517	LRRC47	100	84.127	ENSGGOG00000015571	LRRC47	65	84.392	Gorilla_gorilla
ENSCAPG00000016517	LRRC47	100	86.702	ENSHGLG00000018278	LRRC47	62	86.702	Heterocephalus_glaber_female
ENSCAPG00000016517	LRRC47	100	86.702	ENSHGLG00100008507	LRRC47	93	86.702	Heterocephalus_glaber_male
ENSCAPG00000016517	LRRC47	99	58.793	ENSHCOG00000006348	lrrc47	64	58.115	Hippocampus_comes
ENSCAPG00000016517	LRRC47	100	82.979	ENSSTOG00000027559	LRRC47	65	83.245	Ictidomys_tridecemlineatus
ENSCAPG00000016517	LRRC47	100	82.713	ENSJJAG00000017474	Lrrc47	63	82.713	Jaculus_jaculus
ENSCAPG00000016517	LRRC47	99	59.416	ENSKMAG00000003414	lrrc47	66	59.416	Kryptolebias_marmoratus
ENSCAPG00000016517	LRRC47	100	76.720	ENSLAFG00000011657	LRRC47	65	77.513	Loxodonta_africana
ENSCAPG00000016517	LRRC47	100	84.392	ENSMNEG00000042488	LRRC47	65	84.656	Macaca_nemestrina
ENSCAPG00000016517	LRRC47	100	82.415	ENSMLEG00000043735	LRRC47	77	82.677	Mandrillus_leucophaeus
ENSCAPG00000016517	LRRC47	60	66.667	ENSMGAG00000001670	LRRC47	100	66.667	Meleagris_gallopavo
ENSCAPG00000016517	LRRC47	100	81.915	ENSMAUG00000021337	Lrrc47	64	82.979	Mesocricetus_auratus
ENSCAPG00000016517	LRRC47	100	79.841	ENSMICG00000026816	LRRC47	65	80.159	Microcebus_murinus
ENSCAPG00000016517	LRRC47	100	81.117	ENSMOCG00000021279	Lrrc47	64	82.181	Microtus_ochrogaster
ENSCAPG00000016517	LRRC47	99	57.895	ENSMMOG00000017007	lrrc47	66	57.784	Mola_mola
ENSCAPG00000016517	LRRC47	100	68.435	ENSMODG00000006554	LRRC47	63	68.700	Monodelphis_domestica
ENSCAPG00000016517	LRRC47	100	82.447	MGP_CAROLIEiJ_G0026864	Lrrc47	64	82.447	Mus_caroli
ENSCAPG00000016517	LRRC47	56	33.796	MGP_CAROLIEiJ_G0014310	Farsb	83	32.710	Mus_caroli
ENSCAPG00000016517	LRRC47	56	33.796	ENSMUSG00000026245	Farsb	83	32.710	Mus_musculus
ENSCAPG00000016517	LRRC47	100	82.447	ENSMUSG00000029028	Lrrc47	64	82.447	Mus_musculus
ENSCAPG00000016517	LRRC47	100	81.117	MGP_PahariEiJ_G0029212	Lrrc47	64	82.181	Mus_pahari
ENSCAPG00000016517	LRRC47	56	33.796	MGP_PahariEiJ_G0027548	Farsb	83	32.710	Mus_pahari
ENSCAPG00000016517	LRRC47	56	33.796	MGP_SPRETEiJ_G0015116	Farsb	83	32.710	Mus_spretus
ENSCAPG00000016517	LRRC47	100	82.181	MGP_SPRETEiJ_G0027857	Lrrc47	64	82.181	Mus_spretus
ENSCAPG00000016517	LRRC47	100	75.332	ENSMPUG00000007321	LRRC47	75	75.862	Mustela_putorius_furo
ENSCAPG00000016517	LRRC47	100	77.660	ENSNGAG00000022153	Lrrc47	64	78.457	Nannospalax_galili
ENSCAPG00000016517	LRRC47	100	83.598	ENSNLEG00000008131	LRRC47	67	83.333	Nomascus_leucogenys
ENSCAPG00000016517	LRRC47	100	88.830	ENSODEG00000010882	LRRC47	72	88.830	Octodon_degus
ENSCAPG00000016517	LRRC47	95	61.003	ENSORLG00000002532	lrrc47	65	61.173	Oryzias_latipes
ENSCAPG00000016517	LRRC47	99	60.477	ENSORLG00020019601	lrrc47	66	60.638	Oryzias_latipes_hni
ENSCAPG00000016517	LRRC47	99	59.151	ENSORLG00015014040	lrrc47	66	59.309	Oryzias_latipes_hsok
ENSCAPG00000016517	LRRC47	99	59.682	ENSOMEG00000008989	lrrc47	66	59.840	Oryzias_melastigma
ENSCAPG00000016517	LRRC47	100	80.159	ENSOGAG00000001553	LRRC47	65	80.159	Otolemur_garnettii
ENSCAPG00000016517	LRRC47	100	75.332	ENSOARG00000015290	LRRC47	65	76.330	Ovis_aries
ENSCAPG00000016517	LRRC47	100	83.862	ENSPPAG00000036370	-	81	84.127	Pan_paniscus
ENSCAPG00000016517	LRRC47	100	75.332	ENSPPRG00000005261	LRRC47	64	75.597	Panthera_pardus
ENSCAPG00000016517	LRRC47	100	83.862	ENSPTRG00000000068	LRRC47	65	84.127	Pan_troglodytes
ENSCAPG00000016517	LRRC47	100	84.392	ENSPANG00000012437	LRRC47	65	84.656	Papio_anubis
ENSCAPG00000016517	LRRC47	99	65.079	ENSPSIG00000004196	LRRC47	99	64.550	Pelodiscus_sinensis
ENSCAPG00000016517	LRRC47	100	81.915	ENSPEMG00000021068	Lrrc47	100	82.979	Peromyscus_maniculatus_bairdii
ENSCAPG00000016517	LRRC47	100	68.883	ENSPCIG00000003638	LRRC47	65	72.149	Phascolarctos_cinereus
ENSCAPG00000016517	LRRC47	88	62.048	ENSPFOG00000000992	lrrc47	59	62.236	Poecilia_formosa
ENSCAPG00000016517	LRRC47	99	59.733	ENSPLAG00000008077	lrrc47	65	59.893	Poecilia_latipinna
ENSCAPG00000016517	LRRC47	99	59.151	ENSPMEG00000007367	lrrc47	65	59.091	Poecilia_mexicana
ENSCAPG00000016517	LRRC47	100	84.127	ENSPPYG00000001960	LRRC47	65	84.392	Pongo_abelii
ENSCAPG00000016517	LRRC47	100	81.432	ENSPCOG00000019161	LRRC47	65	80.952	Propithecus_coquereli
ENSCAPG00000016517	LRRC47	100	73.810	ENSPVAG00000009839	LRRC47	65	74.670	Pteropus_vampyrus
ENSCAPG00000016517	LRRC47	100	60.158	ENSPNAG00000017982	lrrc47	65	59.894	Pygocentrus_nattereri
ENSCAPG00000016517	LRRC47	100	81.649	ENSRNOG00000024796	Lrrc47	64	82.713	Rattus_norvegicus
ENSCAPG00000016517	LRRC47	100	84.921	ENSRBIG00000019437	LRRC47	65	85.185	Rhinopithecus_bieti
ENSCAPG00000016517	LRRC47	100	84.921	ENSRROG00000043182	LRRC47	65	85.185	Rhinopithecus_roxellana
ENSCAPG00000016517	LRRC47	100	82.804	ENSSBOG00000026334	LRRC47	77	83.069	Saimiri_boliviensis_boliviensis
ENSCAPG00000016517	LRRC47	100	69.761	ENSSHAG00000007360	LRRC47	64	71.958	Sarcophilus_harrisii
ENSCAPG00000016517	LRRC47	99	58.090	ENSSMAG00000009344	lrrc47	66	59.309	Scophthalmus_maximus
ENSCAPG00000016517	LRRC47	97	59.511	ENSSDUG00000014618	lrrc47	66	58.530	Seriola_dumerili
ENSCAPG00000016517	LRRC47	97	60.598	ENSSLDG00000018908	lrrc47	66	59.574	Seriola_lalandi_dorsalis
ENSCAPG00000016517	LRRC47	100	65.885	ENSSPUG00000010277	LRRC47	64	66.667	Sphenodon_punctatus
ENSCAPG00000016517	LRRC47	99	59.682	ENSSPAG00000005188	lrrc47	66	60.372	Stegastes_partitus
ENSCAPG00000016517	LRRC47	100	76.190	ENSSSCG00000039516	LRRC47	65	77.454	Sus_scrofa
ENSCAPG00000016517	LRRC47	100	64.987	ENSTGUG00000002737	LRRC47	91	63.830	Taeniopygia_guttata
ENSCAPG00000016517	LRRC47	99	59.467	ENSTRUG00000017696	lrrc47	65	59.358	Takifugu_rubripes
ENSCAPG00000016517	LRRC47	99	58.400	ENSTNIG00000010923	lrrc47	65	58.556	Tetraodon_nigroviridis
ENSCAPG00000016517	LRRC47	100	74.868	ENSTTRG00000011751	LRRC47	65	75.862	Tursiops_truncatus
ENSCAPG00000016517	LRRC47	100	75.862	ENSUAMG00000012080	LRRC47	71	76.393	Ursus_americanus
ENSCAPG00000016517	LRRC47	100	75.862	ENSUMAG00000010781	LRRC47	80	76.393	Ursus_maritimus
ENSCAPG00000016517	LRRC47	100	76.393	ENSVVUG00000027118	LRRC47	65	76.923	Vulpes_vulpes
ENSCAPG00000016517	LRRC47	100	63.588	ENSXETG00000006029	lrrc47	66	63.852	Xenopus_tropicalis
ENSCAPG00000016517	LRRC47	99	59.200	ENSXCOG00000002813	lrrc47	65	60.160	Xiphophorus_couchianus
ENSCAPG00000016517	LRRC47	99	59.200	ENSXMAG00000019386	lrrc47	66	59.358	Xiphophorus_maculatus