EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000016985 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 25845 bases
Position: chrAVPZ01001000.1:7831682-7857526
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017282	MRP-S32	PF10210.9	5.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021087	-	402	-	ENSCAPP00000017282	133 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000016985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000016985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000016985	-	89	78.814	ENSCAPG00000015105	-	81	78.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000016985	-	89	84.034	ENSG00000198015	MRPL42	84	84.034	Homo_sapiens
ENSCAPG00000016985	-	86	80.870	ENSAMEG00000009832	MRPL42	91	80.870	Ailuropoda_melanoleuca
ENSCAPG00000016985	-	71	67.010	ENSACIG00000017826	mrpl42	69	67.010	Amphilophus_citrinellus
ENSCAPG00000016985	-	89	72.269	ENSAPLG00000015057	MRPL42	83	72.269	Anas_platyrhynchos
ENSCAPG00000016985	-	78	79.048	ENSANAG00000000692	-	75	79.048	Aotus_nancymaae
ENSCAPG00000016985	-	100	75.373	ENSANAG00000036935	-	91	75.373	Aotus_nancymaae
ENSCAPG00000016985	-	79	80.189	ENSANAG00000033101	-	70	80.189	Aotus_nancymaae
ENSCAPG00000016985	-	89	61.864	ENSANAG00000036083	-	81	61.864	Aotus_nancymaae
ENSCAPG00000016985	-	79	73.585	ENSBTAG00000052971	-	97	73.585	Bos_taurus
ENSCAPG00000016985	-	100	80.597	ENSBTAG00000002708	MRPL42	92	80.597	Bos_taurus
ENSCAPG00000016985	-	89	83.193	ENSCJAG00000046971	MRPL42	84	83.193	Callithrix_jacchus
ENSCAPG00000016985	-	72	88.660	ENSCAFG00020022967	-	85	88.660	Canis_lupus_dingo
ENSCAPG00000016985	-	89	77.869	ENSCHIG00000014921	MRPL42	95	77.869	Capra_hircus
ENSCAPG00000016985	-	78	83.810	ENSTSYG00000036466	-	72	83.810	Carlito_syrichta
ENSCAPG00000016985	-	81	80.734	ENSTSYG00000032810	-	100	80.734	Carlito_syrichta
ENSCAPG00000016985	-	89	89.076	ENSTSYG00000006370	-	84	89.076	Carlito_syrichta
ENSCAPG00000016985	-	99	86.429	ENSCPOG00000030015	-	98	86.429	Cavia_porcellus
ENSCAPG00000016985	-	89	79.661	ENSCPOG00000008943	-	81	79.661	Cavia_porcellus
ENSCAPG00000016985	-	77	80.769	ENSCCAG00000032203	-	63	80.769	Cebus_capucinus
ENSCAPG00000016985	-	79	66.038	ENSCCAG00000029290	-	80	61.053	Cebus_capucinus
ENSCAPG00000016985	-	89	83.193	ENSCCAG00000031179	-	84	83.193	Cebus_capucinus
ENSCAPG00000016985	-	89	84.874	ENSCATG00000037616	MRPL42	84	84.874	Cercocebus_atys
ENSCAPG00000016985	-	100	85.714	ENSCLAG00000005421	MRPL42	91	85.714	Chinchilla_lanigera
ENSCAPG00000016985	-	89	84.034	ENSCSAG00000003706	MRPL42	84	84.034	Chlorocebus_sabaeus
ENSCAPG00000016985	-	95	69.291	ENSCPBG00000001581	MRPL42	86	69.291	Chrysemys_picta_bellii
ENSCAPG00000016985	-	89	84.874	ENSCANG00000033457	MRPL42	84	84.874	Colobus_angolensis_palliatus
ENSCAPG00000016985	-	89	81.513	ENSCGRG00001012694	-	83	81.513	Cricetulus_griseus_chok1gshd
ENSCAPG00000016985	-	89	67.797	ENSCGRG00001003813	-	81	67.797	Cricetulus_griseus_chok1gshd
ENSCAPG00000016985	-	89	81.513	ENSCGRG00000003801	Mrpl42	84	81.513	Cricetulus_griseus_crigri
ENSCAPG00000016985	-	89	78.151	ENSDNOG00000032710	-	84	78.151	Dasypus_novemcinctus
ENSCAPG00000016985	-	89	74.790	ENSDNOG00000049701	-	84	74.790	Dasypus_novemcinctus
ENSCAPG00000016985	-	89	85.714	ENSDORG00000015571	Mrpl42	84	85.714	Dipodomys_ordii
ENSCAPG00000016985	-	91	54.472	ENSETEG00000014745	-	91	54.472	Echinops_telfairi
ENSCAPG00000016985	-	100	80.882	ENSEASG00005019361	MRPL42	96	80.882	Equus_asinus_asinus
ENSCAPG00000016985	-	100	80.147	ENSECAG00000026888	MRPL42	96	80.147	Equus_caballus
ENSCAPG00000016985	-	89	89.076	ENSFCAG00000037907	-	84	89.076	Felis_catus
ENSCAPG00000016985	-	78	64.762	ENSFCAG00000036356	-	64	64.762	Felis_catus
ENSCAPG00000016985	-	89	81.513	ENSFCAG00000040567	-	96	81.513	Felis_catus
ENSCAPG00000016985	-	100	63.830	ENSFALG00000010717	MRPL42	97	63.830	Ficedula_albicollis
ENSCAPG00000016985	-	89	90.756	ENSFDAG00000018129	MRPL42	84	90.756	Fukomys_damarensis
ENSCAPG00000016985	-	88	70.339	ENSGALG00000011293	MRPL42	81	70.339	Gallus_gallus
ENSCAPG00000016985	-	95	70.866	ENSGAGG00000010125	MRPL42	86	70.866	Gopherus_agassizii
ENSCAPG00000016985	-	89	84.034	ENSGGOG00000022760	MRPL42	84	84.034	Gorilla_gorilla
ENSCAPG00000016985	-	89	84.034	ENSHGLG00000007399	-	85	84.034	Heterocephalus_glaber_female
ENSCAPG00000016985	-	86	80.000	ENSHGLG00000008248	-	90	80.000	Heterocephalus_glaber_female
ENSCAPG00000016985	-	89	84.034	ENSHGLG00100018317	-	81	84.034	Heterocephalus_glaber_male
ENSCAPG00000016985	-	84	79.646	ENSHGLG00100013257	-	89	79.646	Heterocephalus_glaber_male
ENSCAPG00000016985	-	89	84.034	ENSSTOG00000026544	MRPL42	84	84.034	Ictidomys_tridecemlineatus
ENSCAPG00000016985	-	83	69.912	ENSLACG00000006919	MRPL42	79	69.912	Latimeria_chalumnae
ENSCAPG00000016985	-	89	84.874	ENSLAFG00000013779	MRPL42	85	84.874	Loxodonta_africana
ENSCAPG00000016985	-	89	84.874	ENSMFAG00000032330	MRPL42	84	84.874	Macaca_fascicularis
ENSCAPG00000016985	-	89	82.353	ENSMMUG00000016805	MRPL42	83	82.353	Macaca_mulatta
ENSCAPG00000016985	-	89	84.034	ENSMNEG00000028853	MRPL42	84	84.034	Macaca_nemestrina
ENSCAPG00000016985	-	89	84.874	ENSMLEG00000038104	MRPL42	84	84.874	Mandrillus_leucophaeus
ENSCAPG00000016985	-	88	72.034	ENSMGAG00000011346	MRPL42	81	72.034	Meleagris_gallopavo
ENSCAPG00000016985	-	72	76.289	ENSMAUG00000018130	-	81	76.289	Mesocricetus_auratus
ENSCAPG00000016985	-	89	75.630	ENSMAUG00000010057	-	84	75.630	Mesocricetus_auratus
ENSCAPG00000016985	-	77	87.379	ENSMICG00000036541	-	99	82.075	Microcebus_murinus
ENSCAPG00000016985	-	89	87.395	ENSMICG00000032596	-	84	87.395	Microcebus_murinus
ENSCAPG00000016985	-	71	82.292	ENSMICG00000045594	-	97	82.292	Microcebus_murinus
ENSCAPG00000016985	-	81	85.321	ENSMICG00000035189	-	76	85.321	Microcebus_murinus
ENSCAPG00000016985	-	71	82.292	ENSMICG00000028094	-	89	82.292	Microcebus_murinus
ENSCAPG00000016985	-	89	81.513	ENSMOCG00000013541	-	84	81.513	Microtus_ochrogaster
ENSCAPG00000016985	-	89	77.119	ENSMOCG00000004616	-	84	77.119	Microtus_ochrogaster
ENSCAPG00000016985	-	89	77.500	MGP_CAROLIEiJ_G0015750	Mrpl42	85	77.500	Mus_caroli
ENSCAPG00000016985	-	89	76.667	ENSMUSG00000062981	Mrpl42	85	76.667	Mus_musculus
ENSCAPG00000016985	-	98	76.119	ENSMLUG00000025058	-	94	76.119	Myotis_lucifugus
ENSCAPG00000016985	-	89	78.992	ENSMLUG00000023702	-	84	78.992	Myotis_lucifugus
ENSCAPG00000016985	-	89	82.353	ENSMLUG00000029623	-	84	82.353	Myotis_lucifugus
ENSCAPG00000016985	-	78	84.762	ENSNGAG00000000717	Mrpl42	82	84.762	Nannospalax_galili
ENSCAPG00000016985	-	89	84.034	ENSNLEG00000005699	MRPL42	84	84.034	Nomascus_leucogenys
ENSCAPG00000016985	-	84	84.071	ENSOPRG00000010967	MRPL42	80	84.071	Ochotona_princeps
ENSCAPG00000016985	-	100	73.723	ENSODEG00000016452	-	95	75.182	Octodon_degus
ENSCAPG00000016985	-	89	85.833	ENSODEG00000012689	-	84	88.333	Octodon_degus
ENSCAPG00000016985	-	88	93.277	ENSODEG00000008681	-	100	93.277	Octodon_degus
ENSCAPG00000016985	-	89	83.193	ENSOCUG00000010928	MRPL42	84	83.193	Oryctolagus_cuniculus
ENSCAPG00000016985	-	89	79.832	ENSOGAG00000026395	-	84	79.832	Otolemur_garnettii
ENSCAPG00000016985	-	99	73.050	ENSOGAG00000034004	-	99	73.050	Otolemur_garnettii
ENSCAPG00000016985	-	89	80.672	ENSOGAG00000027617	-	84	80.672	Otolemur_garnettii
ENSCAPG00000016985	-	89	81.513	ENSOGAG00000030438	-	84	81.513	Otolemur_garnettii
ENSCAPG00000016985	-	99	68.794	ENSOGAG00000024156	-	99	68.794	Otolemur_garnettii
ENSCAPG00000016985	-	89	88.235	ENSOGAG00000025600	-	84	88.235	Otolemur_garnettii
ENSCAPG00000016985	-	89	86.555	ENSOGAG00000025686	-	84	86.555	Otolemur_garnettii
ENSCAPG00000016985	-	89	78.689	ENSOARG00000015849	MRPL42	95	78.689	Ovis_aries
ENSCAPG00000016985	-	89	84.034	ENSPPAG00000038254	MRPL42	84	84.034	Pan_paniscus
ENSCAPG00000016985	-	77	63.462	ENSPPRG00000006533	-	63	63.462	Panthera_pardus
ENSCAPG00000016985	-	89	88.235	ENSPPRG00000015755	-	84	88.235	Panthera_pardus
ENSCAPG00000016985	-	89	88.235	ENSPPRG00000013218	-	84	88.235	Panthera_pardus
ENSCAPG00000016985	-	89	81.513	ENSPPRG00000017935	-	96	81.513	Panthera_pardus
ENSCAPG00000016985	-	89	88.235	ENSPTIG00000009394	-	84	88.235	Panthera_tigris_altaica
ENSCAPG00000016985	-	89	88.235	ENSPTIG00000019099	-	84	88.235	Panthera_tigris_altaica
ENSCAPG00000016985	-	93	75.000	ENSPTIG00000009717	-	92	81.416	Panthera_tigris_altaica
ENSCAPG00000016985	-	89	84.034	ENSPTRG00000022791	MRPL42	84	84.034	Pan_troglodytes
ENSCAPG00000016985	-	81	79.646	ENSPANG00000030179	MRPL42	91	80.556	Papio_anubis
ENSCAPG00000016985	-	95	66.142	ENSPSIG00000010745	MRPL42	86	66.142	Pelodiscus_sinensis
ENSCAPG00000016985	-	89	81.513	ENSPEMG00000020562	-	83	82.857	Peromyscus_maniculatus_bairdii
ENSCAPG00000016985	-	88	72.881	ENSPCIG00000001472	-	62	72.881	Phascolarctos_cinereus
ENSCAPG00000016985	-	89	83.193	ENSPPYG00000004833	MRPL42	84	83.193	Pongo_abelii
ENSCAPG00000016985	-	84	83.621	ENSPCAG00000003791	MRPL42	98	83.621	Procavia_capensis
ENSCAPG00000016985	-	78	84.762	ENSPCOG00000014986	-	76	84.762	Propithecus_coquereli
ENSCAPG00000016985	-	89	66.102	ENSPCOG00000018896	-	81	66.102	Propithecus_coquereli
ENSCAPG00000016985	-	89	74.790	ENSPCOG00000025008	-	83	74.790	Propithecus_coquereli
ENSCAPG00000016985	-	61	67.073	ENSPVAG00000013736	-	69	67.073	Pteropus_vampyrus
ENSCAPG00000016985	-	89	71.667	ENSRNOG00000021867	AABR07009508.1	84	71.667	Rattus_norvegicus
ENSCAPG00000016985	-	89	78.992	ENSRNOG00000042740	Mrpl42	84	78.992	Rattus_norvegicus
ENSCAPG00000016985	-	89	84.034	ENSRBIG00000011046	-	84	84.034	Rhinopithecus_bieti
ENSCAPG00000016985	-	78	60.000	ENSRBIG00000044361	-	60	60.000	Rhinopithecus_bieti
ENSCAPG00000016985	-	89	84.034	ENSRROG00000033949	MRPL42	84	84.034	Rhinopithecus_roxellana
ENSCAPG00000016985	-	70	77.660	ENSSBOG00000027483	-	82	77.660	Saimiri_boliviensis_boliviensis
ENSCAPG00000016985	-	100	73.134	ENSSBOG00000009656	-	92	73.134	Saimiri_boliviensis_boliviensis
ENSCAPG00000016985	-	88	58.475	ENSSBOG00000025086	-	100	58.475	Saimiri_boliviensis_boliviensis
ENSCAPG00000016985	-	95	59.690	ENSSFOG00015006975	mrpl42	88	59.690	Scleropages_formosus
ENSCAPG00000016985	-	83	74.107	ENSSPUG00000015009	-	75	74.107	Sphenodon_punctatus
ENSCAPG00000016985	-	68	67.368	ENSSPAG00000013637	mrpl42	73	67.368	Stegastes_partitus
ENSCAPG00000016985	-	74	60.204	ENSSSCG00000034693	-	84	60.204	Sus_scrofa
ENSCAPG00000016985	-	99	56.818	ENSSSCG00000036897	-	90	56.818	Sus_scrofa
ENSCAPG00000016985	-	80	61.947	ENSSSCG00000035613	-	88	67.677	Sus_scrofa
ENSCAPG00000016985	-	93	84.000	ENSSSCG00000030478	-	93	84.000	Sus_scrofa
ENSCAPG00000016985	-	88	71.186	ENSTGUG00000008272	MRPL42	100	71.186	Taeniopygia_guttata
ENSCAPG00000016985	-	65	60.227	ENSTNIG00000018478	mrpl42	67	60.227	Tetraodon_nigroviridis
ENSCAPG00000016985	-	95	83.465	ENSTTRG00000003312	MRPL42	95	83.465	Tursiops_truncatus
ENSCAPG00000016985	-	100	80.882	ENSUAMG00000025405	-	89	88.235	Ursus_americanus
ENSCAPG00000016985	-	83	73.451	ENSUMAG00000014643	-	70	73.451	Ursus_maritimus
ENSCAPG00000016985	-	100	80.882	ENSUMAG00000003107	-	96	80.882	Ursus_maritimus
ENSCAPG00000016985	-	88	83.898	ENSVPAG00000007658	MRPL42	100	83.898	Vicugna_pacos
ENSCAPG00000016985	-	89	86.555	ENSVVUG00000011842	-	84	86.555	Vulpes_vulpes
ENSCAPG00000016985	-	74	60.396	ENSXMAG00000004057	mrpl42	76	60.396	Xiphophorus_maculatus