EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000017001 (Gene tree)
Gene ID: -
Gene Symbol: TRIT1
Alias: FLJ20061|IPT
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 12403 bases
Position: chrAVPZ01000049.1:1816555-1828957
Accession: 20286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017300	IPPT	PF01715.17	5.7e-46	1	1
ENSCAPP00000017300	zf-C2H2_jaz	PF12171.8	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021106	TRIT1-201	1164	-	ENSCAPP00000017300	387 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017001	TRIT1	93	86.351	ENSG00000043514	TRIT1	98	80.625	Homo_sapiens
ENSCAPG00000017001	TRIT1	82	59.133	ENSAPOG00000020918	trit1	76	56.000	Acanthochromis_polyacanthus
ENSCAPG00000017001	TRIT1	93	85.237	ENSAMEG00000004342	TRIT1	77	85.237	Ailuropoda_melanoleuca
ENSCAPG00000017001	TRIT1	78	62.458	ENSACIG00000017409	trit1	70	60.542	Amphilophus_citrinellus
ENSCAPG00000017001	TRIT1	87	56.000	ENSAOCG00000009850	trit1	72	56.000	Amphiprion_ocellaris
ENSCAPG00000017001	TRIT1	87	56.286	ENSAPEG00000001481	trit1	72	56.286	Amphiprion_percula
ENSCAPG00000017001	TRIT1	90	55.241	ENSATEG00000005426	trit1	71	55.241	Anabas_testudineus
ENSCAPG00000017001	TRIT1	85	64.392	ENSAPLG00000011421	TRIT1	96	64.392	Anas_platyrhynchos
ENSCAPG00000017001	TRIT1	91	65.449	ENSACAG00000002280	TRIT1	71	65.449	Anolis_carolinensis
ENSCAPG00000017001	TRIT1	93	86.630	ENSANAG00000030732	TRIT1	98	81.875	Aotus_nancymaae
ENSCAPG00000017001	TRIT1	90	56.630	ENSACLG00000004920	trit1	75	56.630	Astatotilapia_calliptera
ENSCAPG00000017001	TRIT1	88	55.457	ENSAMXG00000010959	trit1	74	55.457	Astyanax_mexicanus
ENSCAPG00000017001	TRIT1	93	84.958	ENSBTAG00000013832	TRIT1	77	84.958	Bos_taurus
ENSCAPG00000017001	TRIT1	79	33.851	WBGene00001740	gro-1	75	34.226	Caenorhabditis_elegans
ENSCAPG00000017001	TRIT1	93	85.515	ENSCJAG00000002620	TRIT1	98	80.625	Callithrix_jacchus
ENSCAPG00000017001	TRIT1	93	84.765	ENSCAFG00000003048	TRIT1	77	84.765	Canis_familiaris
ENSCAPG00000017001	TRIT1	93	84.680	ENSCAFG00020003875	TRIT1	93	92.228	Canis_lupus_dingo
ENSCAPG00000017001	TRIT1	91	83.944	ENSCHIG00000013259	TRIT1	75	83.944	Capra_hircus
ENSCAPG00000017001	TRIT1	93	86.592	ENSTSYG00000004363	TRIT1	98	81.761	Carlito_syrichta
ENSCAPG00000017001	TRIT1	93	99.441	ENSCPOG00000012820	TRIT1	77	99.441	Cavia_porcellus
ENSCAPG00000017001	TRIT1	93	85.237	ENSCCAG00000031271	TRIT1	98	79.375	Cebus_capucinus
ENSCAPG00000017001	TRIT1	91	80.791	ENSCATG00000034344	TRIT1	100	72.941	Cercocebus_atys
ENSCAPG00000017001	TRIT1	92	92.157	ENSCLAG00000009828	TRIT1	77	92.157	Chinchilla_lanigera
ENSCAPG00000017001	TRIT1	93	85.237	ENSCSAG00000001137	TRIT1	87	85.237	Chlorocebus_sabaeus
ENSCAPG00000017001	TRIT1	93	83.565	ENSCHOG00000000435	TRIT1	77	83.565	Choloepus_hoffmanni
ENSCAPG00000017001	TRIT1	55	67.290	ENSCPBG00000000908	-	100	67.290	Chrysemys_picta_bellii
ENSCAPG00000017001	TRIT1	88	38.592	ENSCSAVG00000002050	-	78	38.592	Ciona_savignyi
ENSCAPG00000017001	TRIT1	93	84.401	ENSCANG00000043008	TRIT1	98	79.375	Colobus_angolensis_palliatus
ENSCAPG00000017001	TRIT1	93	85.237	ENSCGRG00001001894	Trit1	77	85.237	Cricetulus_griseus_chok1gshd
ENSCAPG00000017001	TRIT1	93	85.237	ENSCGRG00000007059	Trit1	80	85.237	Cricetulus_griseus_crigri
ENSCAPG00000017001	TRIT1	78	56.958	ENSCSEG00000009574	trit1	75	53.911	Cynoglossus_semilaevis
ENSCAPG00000017001	TRIT1	87	55.685	ENSDARG00000032876	trit1	76	55.685	Danio_rerio
ENSCAPG00000017001	TRIT1	93	73.430	ENSDNOG00000001994	TRIT1	78	73.430	Dasypus_novemcinctus
ENSCAPG00000017001	TRIT1	93	80.475	ENSDORG00000012449	Trit1	86	80.475	Dipodomys_ordii
ENSCAPG00000017001	TRIT1	85	36.464	FBgn0043799	CG31381	75	36.464	Drosophila_melanogaster
ENSCAPG00000017001	TRIT1	80	87.379	ENSETEG00000008733	TRIT1	73	87.379	Echinops_telfairi
ENSCAPG00000017001	TRIT1	85	50.000	ENSEBUG00000012845	trit1	74	50.000	Eptatretus_burgeri
ENSCAPG00000017001	TRIT1	57	85.520	ENSEASG00005000884	-	100	85.520	Equus_asinus_asinus
ENSCAPG00000017001	TRIT1	93	85.596	ENSECAG00000010597	TRIT1	70	85.596	Equus_caballus
ENSCAPG00000017001	TRIT1	84	67.278	ENSEEUG00000009269	TRIT1	69	67.278	Erinaceus_europaeus
ENSCAPG00000017001	TRIT1	93	47.383	ENSELUG00000017278	trit1	74	47.383	Esox_lucius
ENSCAPG00000017001	TRIT1	93	84.958	ENSFCAG00000006029	TRIT1	100	77.914	Felis_catus
ENSCAPG00000017001	TRIT1	88	72.222	ENSFALG00000000532	TRIT1	86	72.222	Ficedula_albicollis
ENSCAPG00000017001	TRIT1	86	89.426	ENSFDAG00000003098	TRIT1	73	89.426	Fukomys_damarensis
ENSCAPG00000017001	TRIT1	58	60.444	ENSFHEG00000022274	trit1	70	60.444	Fundulus_heteroclitus
ENSCAPG00000017001	TRIT1	83	59.517	ENSGMOG00000006522	trit1	76	59.517	Gadus_morhua
ENSCAPG00000017001	TRIT1	90	68.571	ENSGALG00000003851	TRIT1	76	68.571	Gallus_gallus
ENSCAPG00000017001	TRIT1	65	56.917	ENSGAFG00000018636	trit1	67	58.333	Gambusia_affinis
ENSCAPG00000017001	TRIT1	83	57.622	ENSGACG00000008493	trit1	75	57.622	Gasterosteus_aculeatus
ENSCAPG00000017001	TRIT1	86	73.214	ENSGAGG00000000522	TRIT1	88	73.214	Gopherus_agassizii
ENSCAPG00000017001	TRIT1	93	86.072	ENSGGOG00000010070	TRIT1	98	80.000	Gorilla_gorilla
ENSCAPG00000017001	TRIT1	90	56.906	ENSHBUG00000018999	trit1	81	54.545	Haplochromis_burtoni
ENSCAPG00000017001	TRIT1	91	91.761	ENSHGLG00000010308	-	76	91.761	Heterocephalus_glaber_female
ENSCAPG00000017001	TRIT1	92	83.989	ENSHGLG00000009564	-	77	83.989	Heterocephalus_glaber_female
ENSCAPG00000017001	TRIT1	91	91.761	ENSHGLG00100015382	-	76	91.761	Heterocephalus_glaber_male
ENSCAPG00000017001	TRIT1	67	86.047	ENSHGLG00100018159	-	77	86.047	Heterocephalus_glaber_male
ENSCAPG00000017001	TRIT1	79	60.984	ENSHCOG00000006755	trit1	98	51.643	Hippocampus_comes
ENSCAPG00000017001	TRIT1	95	54.617	ENSIPUG00000021822	trit1	88	54.167	Ictalurus_punctatus
ENSCAPG00000017001	TRIT1	93	87.465	ENSSTOG00000006446	TRIT1	75	87.465	Ictidomys_tridecemlineatus
ENSCAPG00000017001	TRIT1	93	81.616	ENSJJAG00000000316	-	79	81.616	Jaculus_jaculus
ENSCAPG00000017001	TRIT1	93	86.351	ENSJJAG00000000300	-	77	86.351	Jaculus_jaculus
ENSCAPG00000017001	TRIT1	82	59.938	ENSKMAG00000021788	trit1	68	59.938	Kryptolebias_marmoratus
ENSCAPG00000017001	TRIT1	89	55.043	ENSLBEG00000024262	trit1	72	55.043	Labrus_bergylta
ENSCAPG00000017001	TRIT1	82	65.854	ENSLACG00000013861	TRIT1	67	65.854	Latimeria_chalumnae
ENSCAPG00000017001	TRIT1	86	58.457	ENSLOCG00000002057	trit1	71	58.457	Lepisosteus_oculatus
ENSCAPG00000017001	TRIT1	93	84.680	ENSLAFG00000016876	TRIT1	77	84.680	Loxodonta_africana
ENSCAPG00000017001	TRIT1	93	84.958	ENSMFAG00000001316	TRIT1	98	79.375	Macaca_fascicularis
ENSCAPG00000017001	TRIT1	93	84.958	ENSMMUG00000016220	TRIT1	98	79.375	Macaca_mulatta
ENSCAPG00000017001	TRIT1	93	84.958	ENSMNEG00000023137	TRIT1	98	79.375	Macaca_nemestrina
ENSCAPG00000017001	TRIT1	92	84.916	ENSMLEG00000035296	TRIT1	98	78.750	Mandrillus_leucophaeus
ENSCAPG00000017001	TRIT1	79	56.818	ENSMAMG00000005868	trit1	70	53.977	Mastacembelus_armatus
ENSCAPG00000017001	TRIT1	90	56.630	ENSMZEG00005011506	trit1	75	56.630	Maylandia_zebra
ENSCAPG00000017001	TRIT1	82	73.292	ENSMGAG00000005516	TRIT1	86	73.292	Meleagris_gallopavo
ENSCAPG00000017001	TRIT1	93	86.630	ENSMAUG00000000399	Trit1	77	86.630	Mesocricetus_auratus
ENSCAPG00000017001	TRIT1	93	86.072	ENSMICG00000016294	TRIT1	99	77.778	Microcebus_murinus
ENSCAPG00000017001	TRIT1	93	84.958	ENSMOCG00000008173	Trit1	77	84.958	Microtus_ochrogaster
ENSCAPG00000017001	TRIT1	92	56.425	ENSMMOG00000021140	trit1	82	56.534	Mola_mola
ENSCAPG00000017001	TRIT1	87	74.852	ENSMODG00000017650	TRIT1	74	74.852	Monodelphis_domestica
ENSCAPG00000017001	TRIT1	82	55.108	ENSMALG00000017843	trit1	71	53.392	Monopterus_albus
ENSCAPG00000017001	TRIT1	93	84.958	MGP_CAROLIEiJ_G0026428	Trit1	77	84.958	Mus_caroli
ENSCAPG00000017001	TRIT1	93	84.958	ENSMUSG00000028653	Trit1	77	84.958	Mus_musculus
ENSCAPG00000017001	TRIT1	93	84.680	MGP_PahariEiJ_G0028758	Trit1	77	84.680	Mus_pahari
ENSCAPG00000017001	TRIT1	93	85.237	MGP_SPRETEiJ_G0027408	Trit1	77	85.237	Mus_spretus
ENSCAPG00000017001	TRIT1	93	85.319	ENSMPUG00000014291	TRIT1	77	85.319	Mustela_putorius_furo
ENSCAPG00000017001	TRIT1	93	82.173	ENSMLUG00000000334	TRIT1	77	82.173	Myotis_lucifugus
ENSCAPG00000017001	TRIT1	93	86.072	ENSNLEG00000012038	TRIT1	98	80.625	Nomascus_leucogenys
ENSCAPG00000017001	TRIT1	91	62.784	ENSMEUG00000005217	TRIT1	76	62.784	Notamacropus_eugenii
ENSCAPG00000017001	TRIT1	92	90.196	ENSODEG00000006117	TRIT1	76	90.196	Octodon_degus
ENSCAPG00000017001	TRIT1	90	56.906	ENSONIG00000015407	trit1	75	56.906	Oreochromis_niloticus
ENSCAPG00000017001	TRIT1	82	73.041	ENSOANG00000002779	TRIT1	87	68.895	Ornithorhynchus_anatinus
ENSCAPG00000017001	TRIT1	92	85.475	ENSOCUG00000002054	TRIT1	77	85.475	Oryctolagus_cuniculus
ENSCAPG00000017001	TRIT1	87	57.353	ENSORLG00000005802	trit1	74	57.353	Oryzias_latipes
ENSCAPG00000017001	TRIT1	87	56.637	ENSORLG00020005519	trit1	74	56.637	Oryzias_latipes_hni
ENSCAPG00000017001	TRIT1	87	56.471	ENSORLG00015018715	trit1	74	56.471	Oryzias_latipes_hsok
ENSCAPG00000017001	TRIT1	89	58.140	ENSOMEG00000006569	trit1	74	58.772	Oryzias_melastigma
ENSCAPG00000017001	TRIT1	93	83.056	ENSOGAG00000009571	TRIT1	77	83.056	Otolemur_garnettii
ENSCAPG00000017001	TRIT1	93	84.958	ENSOARG00000020140	TRIT1	77	84.958	Ovis_aries
ENSCAPG00000017001	TRIT1	93	86.072	ENSPPAG00000023930	TRIT1	98	80.000	Pan_paniscus
ENSCAPG00000017001	TRIT1	93	84.958	ENSPPRG00000009680	TRIT1	100	78.528	Panthera_pardus
ENSCAPG00000017001	TRIT1	93	84.958	ENSPTIG00000021134	TRIT1	100	78.528	Panthera_tigris_altaica
ENSCAPG00000017001	TRIT1	93	86.072	ENSPTRG00000000579	TRIT1	98	80.000	Pan_troglodytes
ENSCAPG00000017001	TRIT1	93	84.680	ENSPANG00000018125	TRIT1	98	78.750	Papio_anubis
ENSCAPG00000017001	TRIT1	85	54.491	ENSPKIG00000024527	trit1	85	54.242	Paramormyrops_kingsleyae
ENSCAPG00000017001	TRIT1	59	70.000	ENSPSIG00000017073	TRIT1	74	70.000	Pelodiscus_sinensis
ENSCAPG00000017001	TRIT1	87	56.805	ENSPMGG00000018445	trit1	82	56.805	Periophthalmus_magnuspinnatus
ENSCAPG00000017001	TRIT1	93	86.072	ENSPEMG00000022418	Trit1	77	86.072	Peromyscus_maniculatus_bairdii
ENSCAPG00000017001	TRIT1	82	54.407	ENSPMAG00000008892	trit1	82	54.407	Petromyzon_marinus
ENSCAPG00000017001	TRIT1	87	73.699	ENSPCIG00000020666	TRIT1	75	73.699	Phascolarctos_cinereus
ENSCAPG00000017001	TRIT1	90	55.307	ENSPFOG00000014626	trit1	75	55.307	Poecilia_formosa
ENSCAPG00000017001	TRIT1	62	57.500	ENSPLAG00000011669	trit1	72	57.500	Poecilia_latipinna
ENSCAPG00000017001	TRIT1	61	58.824	ENSPREG00000018182	trit1	68	58.824	Poecilia_reticulata
ENSCAPG00000017001	TRIT1	93	86.072	ENSPPYG00000001499	TRIT1	77	86.072	Pongo_abelii
ENSCAPG00000017001	TRIT1	93	72.423	ENSPCAG00000014680	TRIT1	99	72.423	Procavia_capensis
ENSCAPG00000017001	TRIT1	92	85.955	ENSPCOG00000014150	TRIT1	98	79.245	Propithecus_coquereli
ENSCAPG00000017001	TRIT1	93	74.095	ENSPVAG00000003344	TRIT1	77	74.095	Pteropus_vampyrus
ENSCAPG00000017001	TRIT1	51	59.606	ENSPNYG00000001003	trit1	66	59.606	Pundamilia_nyererei
ENSCAPG00000017001	TRIT1	82	57.278	ENSPNAG00000009466	trit1	64	60.938	Pygocentrus_nattereri
ENSCAPG00000017001	TRIT1	93	83.008	ENSRNOG00000014274	Trit1	75	83.008	Rattus_norvegicus
ENSCAPG00000017001	TRIT1	93	84.123	ENSRBIG00000043179	TRIT1	98	79.375	Rhinopithecus_bieti
ENSCAPG00000017001	TRIT1	93	84.123	ENSRROG00000042670	TRIT1	98	79.375	Rhinopithecus_roxellana
ENSCAPG00000017001	TRIT1	83	33.235	YOR274W	-	74	33.235	Saccharomyces_cerevisiae
ENSCAPG00000017001	TRIT1	93	84.401	ENSSBOG00000024417	TRIT1	98	78.750	Saimiri_boliviensis_boliviensis
ENSCAPG00000017001	TRIT1	91	73.521	ENSSHAG00000018363	TRIT1	84	73.521	Sarcophilus_harrisii
ENSCAPG00000017001	TRIT1	82	56.646	ENSSFOG00015007284	trit1	63	56.646	Scleropages_formosus
ENSCAPG00000017001	TRIT1	91	54.270	ENSSMAG00000020730	trit1	74	54.270	Scophthalmus_maximus
ENSCAPG00000017001	TRIT1	92	54.076	ENSSDUG00000001683	trit1	76	54.076	Seriola_dumerili
ENSCAPG00000017001	TRIT1	79	57.419	ENSSLDG00000008379	trit1	67	57.276	Seriola_lalandi_dorsalis
ENSCAPG00000017001	TRIT1	99	76.227	ENSSARG00000004540	TRIT1	81	76.227	Sorex_araneus
ENSCAPG00000017001	TRIT1	84	70.859	ENSSPUG00000003472	TRIT1	67	70.859	Sphenodon_punctatus
ENSCAPG00000017001	TRIT1	80	58.991	ENSSPAG00000020745	trit1	73	57.492	Stegastes_partitus
ENSCAPG00000017001	TRIT1	57	81.696	ENSSSCG00000003667	-	100	81.696	Sus_scrofa
ENSCAPG00000017001	TRIT1	83	69.969	ENSTGUG00000001242	TRIT1	86	69.969	Taeniopygia_guttata
ENSCAPG00000017001	TRIT1	87	57.817	ENSTRUG00000013936	trit1	71	59.627	Takifugu_rubripes
ENSCAPG00000017001	TRIT1	93	53.846	ENSTNIG00000009240	trit1	78	53.846	Tetraodon_nigroviridis
ENSCAPG00000017001	TRIT1	72	85.663	ENSTBEG00000001317	TRIT1	59	85.663	Tupaia_belangeri
ENSCAPG00000017001	TRIT1	93	85.515	ENSTTRG00000005064	TRIT1	77	85.515	Tursiops_truncatus
ENSCAPG00000017001	TRIT1	50	83.673	ENSUAMG00000000509	-	98	83.673	Ursus_americanus
ENSCAPG00000017001	TRIT1	93	84.680	ENSUMAG00000017299	TRIT1	69	84.680	Ursus_maritimus
ENSCAPG00000017001	TRIT1	93	85.237	ENSVPAG00000003008	TRIT1	77	85.237	Vicugna_pacos
ENSCAPG00000017001	TRIT1	50	91.710	ENSVVUG00000005208	-	93	91.710	Vulpes_vulpes
ENSCAPG00000017001	TRIT1	82	61.585	ENSXETG00000010952	trit1	73	61.585	Xenopus_tropicalis
ENSCAPG00000017001	TRIT1	62	58.333	ENSXMAG00000016302	trit1	67	58.333	Xiphophorus_maculatus