EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017041 (Gene tree)
Gene ID: -
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 30774 bases
Position: chrAVPZ01000400.1:14721262-14752035
Accession: 11370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017362	dsrm	PF00035.26	7.8e-34	1	3
ENSCAPP00000017362	dsrm	PF00035.26	7.8e-34	2	3
ENSCAPP00000017362	dsrm	PF00035.26	7.8e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021168	STAU1-201	1449	-	ENSCAPP00000017362	482 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017041	STAU1	66	51.335	ENSCAPG00000017061	-	64	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017041	STAU1	100	94.332	ENSG00000124214	STAU1	100	94.332	Homo_sapiens
ENSCAPG00000017041	STAU1	99	72.056	ENSAPOG00000017260	stau1	72	72.255	Acanthochromis_polyacanthus
ENSCAPG00000017041	STAU1	99	91.667	ENSAMEG00000013681	STAU1	70	91.667	Ailuropoda_melanoleuca
ENSCAPG00000017041	STAU1	99	75.000	ENSACIG00000015918	stau1	72	75.202	Amphilophus_citrinellus
ENSCAPG00000017041	STAU1	99	73.054	ENSAOCG00000012224	stau1	72	73.253	Amphiprion_ocellaris
ENSCAPG00000017041	STAU1	99	73.253	ENSAPEG00000012308	stau1	72	73.453	Amphiprion_percula
ENSCAPG00000017041	STAU1	99	73.441	ENSATEG00000024600	stau1	74	73.642	Anabas_testudineus
ENSCAPG00000017041	STAU1	99	84.538	ENSAPLG00000010527	STAU1	70	84.538	Anas_platyrhynchos
ENSCAPG00000017041	STAU1	99	84.168	ENSACAG00000015909	STAU1	71	84.168	Anolis_carolinensis
ENSCAPG00000017041	STAU1	100	92.829	ENSANAG00000032714	STAU1	100	88.105	Aotus_nancymaae
ENSCAPG00000017041	STAU1	99	72.455	ENSACLG00000012270	stau1	72	72.655	Astatotilapia_calliptera
ENSCAPG00000017041	STAU1	100	72.525	ENSAMXG00000016812	stau1	86	72.727	Astyanax_mexicanus
ENSCAPG00000017041	STAU1	100	91.935	ENSBTAG00000000241	STAU1	86	91.935	Bos_taurus
ENSCAPG00000017041	STAU1	100	93.952	ENSCJAG00000016233	STAU1	86	93.952	Callithrix_jacchus
ENSCAPG00000017041	STAU1	100	91.532	ENSCAFG00000011347	STAU1	84	91.532	Canis_familiaris
ENSCAPG00000017041	STAU1	100	90.258	ENSCAFG00020017123	STAU1	83	90.258	Canis_lupus_dingo
ENSCAPG00000017041	STAU1	100	91.734	ENSCHIG00000001799	-	100	85.132	Capra_hircus
ENSCAPG00000017041	STAU1	100	91.331	ENSTSYG00000036179	-	86	91.331	Carlito_syrichta
ENSCAPG00000017041	STAU1	99	92.525	ENSCPOG00000005566	STAU1	100	92.525	Cavia_porcellus
ENSCAPG00000017041	STAU1	100	92.629	ENSCCAG00000034339	STAU1	86	92.629	Cebus_capucinus
ENSCAPG00000017041	STAU1	100	93.952	ENSCATG00000028474	STAU1	100	92.829	Cercocebus_atys
ENSCAPG00000017041	STAU1	100	77.621	ENSCLAG00000002784	-	100	77.621	Chinchilla_lanigera
ENSCAPG00000017041	STAU1	99	94.747	ENSCLAG00000006516	-	100	94.747	Chinchilla_lanigera
ENSCAPG00000017041	STAU1	100	93.750	ENSCSAG00000014986	STAU1	100	93.750	Chlorocebus_sabaeus
ENSCAPG00000017041	STAU1	100	91.952	ENSCHOG00000001511	STAU1	86	91.952	Choloepus_hoffmanni
ENSCAPG00000017041	STAU1	99	84.369	ENSCPBG00000026741	STAU1	72	84.369	Chrysemys_picta_bellii
ENSCAPG00000017041	STAU1	100	93.750	ENSCANG00000039220	STAU1	100	83.903	Colobus_angolensis_palliatus
ENSCAPG00000017041	STAU1	99	88.081	ENSCGRG00001013453	Stau1	100	88.081	Cricetulus_griseus_chok1gshd
ENSCAPG00000017041	STAU1	99	88.081	ENSCGRG00000007216	Stau1	100	88.081	Cricetulus_griseus_crigri
ENSCAPG00000017041	STAU1	99	67.071	ENSCSEG00000000792	stau1	69	67.475	Cynoglossus_semilaevis
ENSCAPG00000017041	STAU1	99	72.008	ENSCVAG00000005906	stau1	87	72.211	Cyprinodon_variegatus
ENSCAPG00000017041	STAU1	99	71.514	ENSDARG00000044182	stau1	79	71.713	Danio_rerio
ENSCAPG00000017041	STAU1	100	92.354	ENSDNOG00000014933	STAU1	84	92.354	Dasypus_novemcinctus
ENSCAPG00000017041	STAU1	99	89.571	ENSDORG00000030220	Stau1	100	89.571	Dipodomys_ordii
ENSCAPG00000017041	STAU1	85	92.359	ENSETEG00000018235	STAU1	73	92.359	Echinops_telfairi
ENSCAPG00000017041	STAU1	100	92.339	ENSEASG00005023343	STAU1	88	90.217	Equus_asinus_asinus
ENSCAPG00000017041	STAU1	100	92.137	ENSECAG00000012894	STAU1	86	92.137	Equus_caballus
ENSCAPG00000017041	STAU1	93	93.418	ENSEEUG00000014344	STAU1	68	93.418	Erinaceus_europaeus
ENSCAPG00000017041	STAU1	99	70.138	ENSELUG00000002529	stau1	78	71.316	Esox_lucius
ENSCAPG00000017041	STAU1	100	92.742	ENSFCAG00000001447	STAU1	100	85.282	Felis_catus
ENSCAPG00000017041	STAU1	99	83.570	ENSFALG00000012940	STAU1	71	83.570	Ficedula_albicollis
ENSCAPG00000017041	STAU1	100	72.032	ENSFDAG00000020837	-	100	72.032	Fukomys_damarensis
ENSCAPG00000017041	STAU1	99	93.939	ENSFDAG00000014119	-	100	93.939	Fukomys_damarensis
ENSCAPG00000017041	STAU1	99	71.919	ENSFHEG00000013517	stau1	86	72.121	Fundulus_heteroclitus
ENSCAPG00000017041	STAU1	99	61.509	ENSGMOG00000016850	stau1	72	61.509	Gadus_morhua
ENSCAPG00000017041	STAU1	99	86.004	ENSGALG00000004736	STAU1	71	86.004	Gallus_gallus
ENSCAPG00000017041	STAU1	99	72.255	ENSGAFG00000010437	stau1	72	72.455	Gambusia_affinis
ENSCAPG00000017041	STAU1	99	71.912	ENSGACG00000001352	stau1	73	72.112	Gasterosteus_aculeatus
ENSCAPG00000017041	STAU1	99	84.990	ENSGAGG00000009825	STAU1	71	84.990	Gopherus_agassizii
ENSCAPG00000017041	STAU1	100	93.028	ENSGGOG00000025351	STAU1	100	95.890	Gorilla_gorilla
ENSCAPG00000017041	STAU1	99	72.655	ENSHBUG00000023668	stau1	72	72.854	Haplochromis_burtoni
ENSCAPG00000017041	STAU1	99	95.910	ENSHGLG00000008730	STAU1	100	95.910	Heterocephalus_glaber_female
ENSCAPG00000017041	STAU1	99	95.910	ENSHGLG00100000098	STAU1	100	95.910	Heterocephalus_glaber_male
ENSCAPG00000017041	STAU1	99	70.020	ENSHCOG00000018461	stau1	71	70.221	Hippocampus_comes
ENSCAPG00000017041	STAU1	94	71.915	ENSIPUG00000023725	stau1	71	72.128	Ictalurus_punctatus
ENSCAPG00000017041	STAU1	99	93.865	ENSSTOG00000003634	STAU1	100	93.865	Ictidomys_tridecemlineatus
ENSCAPG00000017041	STAU1	99	91.411	ENSJJAG00000020032	Stau1	100	91.616	Jaculus_jaculus
ENSCAPG00000017041	STAU1	99	71.169	ENSKMAG00000007135	stau1	72	71.371	Kryptolebias_marmoratus
ENSCAPG00000017041	STAU1	99	71.116	ENSLBEG00000020172	stau1	72	71.315	Labrus_bergylta
ENSCAPG00000017041	STAU1	99	79.879	ENSLACG00000016157	STAU1	71	78.614	Latimeria_chalumnae
ENSCAPG00000017041	STAU1	99	77.465	ENSLOCG00000003134	stau1	72	77.465	Lepisosteus_oculatus
ENSCAPG00000017041	STAU1	100	91.129	ENSLAFG00000003238	STAU1	97	91.129	Loxodonta_africana
ENSCAPG00000017041	STAU1	100	93.952	ENSMFAG00000040931	STAU1	100	96.324	Macaca_fascicularis
ENSCAPG00000017041	STAU1	100	92.829	ENSMMUG00000002302	STAU1	100	96.324	Macaca_mulatta
ENSCAPG00000017041	STAU1	100	93.952	ENSMNEG00000033821	STAU1	100	92.829	Macaca_nemestrina
ENSCAPG00000017041	STAU1	100	93.952	ENSMLEG00000031383	STAU1	86	93.952	Mandrillus_leucophaeus
ENSCAPG00000017041	STAU1	99	73.843	ENSMAMG00000017586	stau1	75	74.044	Mastacembelus_armatus
ENSCAPG00000017041	STAU1	99	72.455	ENSMZEG00005015605	stau1	72	72.655	Maylandia_zebra
ENSCAPG00000017041	STAU1	99	84.739	ENSMGAG00000004719	STAU1	70	84.739	Meleagris_gallopavo
ENSCAPG00000017041	STAU1	99	87.879	ENSMAUG00000013846	Stau1	100	87.879	Mesocricetus_auratus
ENSCAPG00000017041	STAU1	100	91.633	ENSMICG00000001995	STAU1	86	91.833	Microcebus_murinus
ENSCAPG00000017041	STAU1	99	89.938	ENSMOCG00000018743	Stau1	100	89.091	Microtus_ochrogaster
ENSCAPG00000017041	STAU1	100	72.819	ENSMMOG00000015455	stau1	99	73.022	Mola_mola
ENSCAPG00000017041	STAU1	100	89.113	ENSMODG00000016276	STAU1	74	89.113	Monodelphis_domestica
ENSCAPG00000017041	STAU1	99	73.054	ENSMALG00000000045	stau1	72	73.253	Monopterus_albus
ENSCAPG00000017041	STAU1	99	88.912	MGP_CAROLIEiJ_G0024699	Stau1	100	88.912	Mus_caroli
ENSCAPG00000017041	STAU1	99	88.296	ENSMUSG00000039536	Stau1	100	88.296	Mus_musculus
ENSCAPG00000017041	STAU1	99	88.501	MGP_PahariEiJ_G0026141	Stau1	100	88.501	Mus_pahari
ENSCAPG00000017041	STAU1	99	87.885	MGP_SPRETEiJ_G0025619	Stau1	100	87.885	Mus_spretus
ENSCAPG00000017041	STAU1	99	92.073	ENSMPUG00000017581	STAU1	73	92.073	Mustela_putorius_furo
ENSCAPG00000017041	STAU1	100	91.935	ENSMLUG00000008407	STAU1	84	91.935	Myotis_lucifugus
ENSCAPG00000017041	STAU1	99	91.313	ENSNGAG00000007108	Stau1	100	91.313	Nannospalax_galili
ENSCAPG00000017041	STAU1	99	72.655	ENSNBRG00000017596	stau1	72	72.854	Neolamprologus_brichardi
ENSCAPG00000017041	STAU1	100	93.750	ENSNLEG00000006955	STAU1	100	92.629	Nomascus_leucogenys
ENSCAPG00000017041	STAU1	94	91.886	ENSMEUG00000003263	STAU1	79	91.886	Notamacropus_eugenii
ENSCAPG00000017041	STAU1	100	91.549	ENSOPRG00000014569	STAU1	87	91.549	Ochotona_princeps
ENSCAPG00000017041	STAU1	100	95.547	ENSODEG00000006523	STAU1	100	95.547	Octodon_degus
ENSCAPG00000017041	STAU1	99	72.854	ENSONIG00000004152	stau1	69	73.054	Oreochromis_niloticus
ENSCAPG00000017041	STAU1	99	84.970	ENSOANG00000006394	STAU1	71	84.970	Ornithorhynchus_anatinus
ENSCAPG00000017041	STAU1	100	93.548	ENSOCUG00000006214	STAU1	86	93.548	Oryctolagus_cuniculus
ENSCAPG00000017041	STAU1	99	70.942	ENSOMEG00000002388	stau1	72	71.142	Oryzias_melastigma
ENSCAPG00000017041	STAU1	100	93.750	ENSOGAG00000002127	STAU1	84	93.750	Otolemur_garnettii
ENSCAPG00000017041	STAU1	99	63.074	ENSOGAG00000028222	-	99	63.508	Otolemur_garnettii
ENSCAPG00000017041	STAU1	100	91.734	ENSOARG00000012204	STAU1	84	91.734	Ovis_aries
ENSCAPG00000017041	STAU1	100	93.028	ENSPPAG00000032023	STAU1	100	95.890	Pan_paniscus
ENSCAPG00000017041	STAU1	100	92.742	ENSPPRG00000003436	STAU1	100	92.742	Panthera_pardus
ENSCAPG00000017041	STAU1	100	92.742	ENSPTIG00000011768	STAU1	100	91.451	Panthera_tigris_altaica
ENSCAPG00000017041	STAU1	100	93.028	ENSPTRG00000023130	STAU1	100	95.890	Pan_troglodytes
ENSCAPG00000017041	STAU1	100	93.952	ENSPANG00000020560	STAU1	100	88.687	Papio_anubis
ENSCAPG00000017041	STAU1	99	72.255	ENSPKIG00000024588	stau1	72	72.455	Paramormyrops_kingsleyae
ENSCAPG00000017041	STAU1	99	84.787	ENSPSIG00000010731	STAU1	71	84.787	Pelodiscus_sinensis
ENSCAPG00000017041	STAU1	99	73.547	ENSPMGG00000018553	stau1	99	71.197	Periophthalmus_magnuspinnatus
ENSCAPG00000017041	STAU1	99	88.485	ENSPEMG00000022045	Stau1	100	88.485	Peromyscus_maniculatus_bairdii
ENSCAPG00000017041	STAU1	100	89.676	ENSPCIG00000023269	STAU1	95	89.676	Phascolarctos_cinereus
ENSCAPG00000017041	STAU1	99	72.311	ENSPFOG00000017253	stau1	72	72.510	Poecilia_formosa
ENSCAPG00000017041	STAU1	62	67.834	ENSPLAG00000014829	stau1	79	69.427	Poecilia_latipinna
ENSCAPG00000017041	STAU1	93	71.489	ENSPMEG00000007495	stau1	69	71.702	Poecilia_mexicana
ENSCAPG00000017041	STAU1	99	71.912	ENSPREG00000003477	stau1	72	72.112	Poecilia_reticulata
ENSCAPG00000017041	STAU1	100	93.952	ENSPPYG00000011111	STAU1	86	93.952	Pongo_abelii
ENSCAPG00000017041	STAU1	93	82.289	ENSPCAG00000002459	STAU1	85	82.289	Procavia_capensis
ENSCAPG00000017041	STAU1	100	93.145	ENSPCOG00000027746	STAU1	100	92.032	Propithecus_coquereli
ENSCAPG00000017041	STAU1	84	94.702	ENSPVAG00000015019	STAU1	72	94.702	Pteropus_vampyrus
ENSCAPG00000017041	STAU1	99	72.655	ENSPNYG00000014436	stau1	72	72.854	Pundamilia_nyererei
ENSCAPG00000017041	STAU1	99	70.833	ENSPNAG00000011323	stau1	78	71.032	Pygocentrus_nattereri
ENSCAPG00000017041	STAU1	99	87.475	ENSRNOG00000007781	Stau1	100	87.475	Rattus_norvegicus
ENSCAPG00000017041	STAU1	100	92.829	ENSRBIG00000037345	STAU1	100	93.725	Rhinopithecus_bieti
ENSCAPG00000017041	STAU1	100	93.952	ENSRROG00000039008	STAU1	100	93.763	Rhinopithecus_roxellana
ENSCAPG00000017041	STAU1	100	93.750	ENSSBOG00000034448	STAU1	100	89.315	Saimiri_boliviensis_boliviensis
ENSCAPG00000017041	STAU1	100	89.315	ENSSHAG00000009492	STAU1	84	89.315	Sarcophilus_harrisii
ENSCAPG00000017041	STAU1	99	74.648	ENSSFOG00015021497	stau1	87	71.567	Scleropages_formosus
ENSCAPG00000017041	STAU1	99	72.854	ENSSMAG00000017410	stau1	72	73.054	Scophthalmus_maximus
ENSCAPG00000017041	STAU1	99	73.852	ENSSDUG00000019439	stau1	72	74.052	Seriola_dumerili
ENSCAPG00000017041	STAU1	99	73.852	ENSSLDG00000025040	stau1	72	74.052	Seriola_lalandi_dorsalis
ENSCAPG00000017041	STAU1	99	83.968	ENSSPUG00000017983	STAU1	74	83.936	Sphenodon_punctatus
ENSCAPG00000017041	STAU1	99	73.253	ENSSPAG00000019275	stau1	72	73.453	Stegastes_partitus
ENSCAPG00000017041	STAU1	100	93.522	ENSSSCG00000027444	STAU1	100	93.145	Sus_scrofa
ENSCAPG00000017041	STAU1	99	83.367	ENSTGUG00000008784	STAU1	70	83.367	Taeniopygia_guttata
ENSCAPG00000017041	STAU1	99	74.245	ENSTRUG00000005837	stau1	71	74.447	Takifugu_rubripes
ENSCAPG00000017041	STAU1	99	72.709	ENSTNIG00000014732	stau1	74	72.908	Tetraodon_nigroviridis
ENSCAPG00000017041	STAU1	100	78.270	ENSTBEG00000009404	STAU1	86	79.477	Tupaia_belangeri
ENSCAPG00000017041	STAU1	94	92.763	ENSTTRG00000004285	STAU1	79	92.763	Tursiops_truncatus
ENSCAPG00000017041	STAU1	100	90.457	ENSUAMG00000025449	STAU1	100	90.457	Ursus_americanus
ENSCAPG00000017041	STAU1	74	88.360	ENSUMAG00000024475	STAU1	89	88.360	Ursus_maritimus
ENSCAPG00000017041	STAU1	100	92.944	ENSVPAG00000001313	STAU1	86	92.944	Vicugna_pacos
ENSCAPG00000017041	STAU1	100	90.457	ENSVVUG00000022325	STAU1	74	90.457	Vulpes_vulpes
ENSCAPG00000017041	STAU1	99	78.138	ENSXETG00000001783	stau1	71	78.340	Xenopus_tropicalis
ENSCAPG00000017041	STAU1	54	70.438	ENSXCOG00000008804	stau1	74	70.000	Xiphophorus_couchianus
ENSCAPG00000017041	STAU1	99	72.255	ENSXMAG00000016175	stau1	72	72.455	Xiphophorus_maculatus