EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017061 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 122264 bases
Position: chrAVPZ01000001.1:39339324-39461587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017401	dsrm	PF00035.26	3.5e-39	1	3
ENSCAPP00000017401	dsrm	PF00035.26	3.5e-39	2	3
ENSCAPP00000017401	dsrm	PF00035.26	3.5e-39	3	3
ENSCAPP00000017407	dsrm	PF00035.26	3.8e-39	1	3
ENSCAPP00000017407	dsrm	PF00035.26	3.8e-39	2	3
ENSCAPP00000017407	dsrm	PF00035.26	3.8e-39	3	3
ENSCAPP00000017411	dsrm	PF00035.26	4.8e-32	1	2
ENSCAPP00000017411	dsrm	PF00035.26	4.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021213	-	1488	-	ENSCAPP00000017407	495 (aa)	-	-
ENSCAPT00000021217	-	1377	-	ENSCAPP00000017411	458 (aa)	-	-
ENSCAPT00000021207	-	1473	-	ENSCAPP00000017401	490 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017061	-	64	52.941	ENSCAPG00000017041	STAU1	66	51.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017061	-	98	81.445	ENSG00000040341	STAU2	98	95.455	Homo_sapiens
ENSCAPG00000017061	-	98	58.824	ENSAPOG00000002892	stau2	78	58.824	Acanthochromis_polyacanthus
ENSCAPG00000017061	-	98	82.422	ENSAMEG00000001864	STAU2	93	80.785	Ailuropoda_melanoleuca
ENSCAPG00000017061	-	98	59.013	ENSACIG00000000839	stau2	86	59.013	Amphilophus_citrinellus
ENSCAPG00000017061	-	98	58.824	ENSAOCG00000013358	stau2	78	58.824	Amphiprion_ocellaris
ENSCAPG00000017061	-	98	58.824	ENSAPEG00000022162	stau2	78	58.824	Amphiprion_percula
ENSCAPG00000017061	-	98	57.656	ENSATEG00000013484	stau2	92	57.089	Anabas_testudineus
ENSCAPG00000017061	-	98	70.760	ENSAPLG00000005175	STAU2	80	72.353	Anas_platyrhynchos
ENSCAPG00000017061	-	98	65.039	ENSACAG00000012977	STAU2	88	65.039	Anolis_carolinensis
ENSCAPG00000017061	-	99	80.460	ENSANAG00000023588	STAU2	98	80.753	Aotus_nancymaae
ENSCAPG00000017061	-	98	58.634	ENSACLG00000024336	stau2	90	58.634	Astatotilapia_calliptera
ENSCAPG00000017061	-	98	61.793	ENSAMXG00000000460	stau2	79	61.598	Astyanax_mexicanus
ENSCAPG00000017061	-	99	80.651	ENSBTAG00000002076	STAU2	89	81.250	Bos_taurus
ENSCAPG00000017061	-	98	81.836	ENSCJAG00000007632	STAU2	96	81.474	Callithrix_jacchus
ENSCAPG00000017061	-	95	81.104	ENSCJAG00000009484	-	95	81.978	Callithrix_jacchus
ENSCAPG00000017061	-	98	82.422	ENSCAFG00000008077	STAU2	89	82.422	Canis_familiaris
ENSCAPG00000017061	-	99	81.226	ENSCAFG00020017809	STAU2	89	81.875	Canis_lupus_dingo
ENSCAPG00000017061	-	99	80.651	ENSCHIG00000012254	STAU2	90	82.903	Capra_hircus
ENSCAPG00000017061	-	99	67.698	ENSTSYG00000034361	-	93	72.964	Carlito_syrichta
ENSCAPG00000017061	-	98	83.789	ENSCPOG00000015001	-	99	83.789	Cavia_porcellus
ENSCAPG00000017061	-	98	81.836	ENSCCAG00000035053	-	97	81.435	Cebus_capucinus
ENSCAPG00000017061	-	98	81.641	ENSCATG00000044825	STAU2	99	81.641	Cercocebus_atys
ENSCAPG00000017061	-	95	62.372	ENSCATG00000031335	-	98	61.684	Cercocebus_atys
ENSCAPG00000017061	-	99	81.696	ENSCLAG00000001824	STAU2	99	82.422	Chinchilla_lanigera
ENSCAPG00000017061	-	99	80.460	ENSCSAG00000013572	-	94	80.460	Chlorocebus_sabaeus
ENSCAPG00000017061	-	98	68.102	ENSCHOG00000010590	STAU2	72	93.407	Choloepus_hoffmanni
ENSCAPG00000017061	-	98	70.291	ENSCPBG00000006987	STAU2	83	72.059	Chrysemys_picta_bellii
ENSCAPG00000017061	-	98	60.000	ENSCANG00000031540	-	99	67.290	Colobus_angolensis_palliatus
ENSCAPG00000017061	-	98	80.859	ENSCGRG00001006522	Stau2	74	96.703	Cricetulus_griseus_chok1gshd
ENSCAPG00000017061	-	70	85.981	ENSCGRG00000007511	Stau2	98	85.981	Cricetulus_griseus_crigri
ENSCAPG00000017061	-	98	54.323	ENSCSEG00000010050	stau2	78	54.049	Cynoglossus_semilaevis
ENSCAPG00000017061	-	98	57.598	ENSCVAG00000009893	stau2	79	57.786	Cyprinodon_variegatus
ENSCAPG00000017061	-	98	62.157	ENSDARG00000026801	stau2	75	62.157	Danio_rerio
ENSCAPG00000017061	-	98	80.980	ENSDNOG00000039875	STAU2	89	81.250	Dasypus_novemcinctus
ENSCAPG00000017061	-	98	82.549	ENSDORG00000014308	Stau2	99	82.549	Dipodomys_ordii
ENSCAPG00000017061	-	98	73.633	ENSETEG00000009087	STAU2	89	73.633	Echinops_telfairi
ENSCAPG00000017061	-	79	36.053	ENSEBUG00000006591	STAU2	89	35.279	Eptatretus_burgeri
ENSCAPG00000017061	-	99	80.769	ENSEASG00005020174	STAU2	90	80.460	Equus_asinus_asinus
ENSCAPG00000017061	-	99	80.651	ENSECAG00000000260	STAU2	85	80.651	Equus_caballus
ENSCAPG00000017061	-	98	80.859	ENSEEUG00000015102	STAU2	88	81.873	Erinaceus_europaeus
ENSCAPG00000017061	-	92	60.484	ENSELUG00000006988	stau2	83	60.606	Esox_lucius
ENSCAPG00000017061	-	99	81.226	ENSFCAG00000004917	STAU2	96	82.105	Felis_catus
ENSCAPG00000017061	-	99	69.143	ENSFALG00000008552	STAU2	75	71.875	Ficedula_albicollis
ENSCAPG00000017061	-	98	83.008	ENSFDAG00000005157	STAU2	99	91.409	Fukomys_damarensis
ENSCAPG00000017061	-	67	61.231	ENSFHEG00000018386	stau2	85	61.043	Fundulus_heteroclitus
ENSCAPG00000017061	-	77	62.560	ENSGMOG00000005428	stau2	67	62.560	Gadus_morhua
ENSCAPG00000017061	-	98	70.874	ENSGALG00000031390	STAU2	84	72.266	Gallus_gallus
ENSCAPG00000017061	-	98	57.875	ENSGAFG00000008442	stau2	81	57.875	Gambusia_affinis
ENSCAPG00000017061	-	98	59.501	ENSGACG00000002757	stau2	83	58.925	Gasterosteus_aculeatus
ENSCAPG00000017061	-	98	70.291	ENSGAGG00000003794	STAU2	79	71.680	Gopherus_agassizii
ENSCAPG00000017061	-	98	81.641	ENSGGOG00000026508	STAU2	99	81.641	Gorilla_gorilla
ENSCAPG00000017061	-	63	65.398	ENSGGOG00000036979	-	99	65.398	Gorilla_gorilla
ENSCAPG00000017061	-	98	58.634	ENSHBUG00000020209	stau2	90	58.634	Haplochromis_burtoni
ENSCAPG00000017061	-	98	83.008	ENSHGLG00000014888	STAU2	89	83.008	Heterocephalus_glaber_female
ENSCAPG00000017061	-	98	83.008	ENSHGLG00100005337	STAU2	89	83.008	Heterocephalus_glaber_male
ENSCAPG00000017061	-	95	57.935	ENSHCOG00000004724	stau2	86	57.854	Hippocampus_comes
ENSCAPG00000017061	-	98	57.333	ENSIPUG00000009105	stau2	90	56.952	Ictalurus_punctatus
ENSCAPG00000017061	-	98	82.779	ENSSTOG00000011076	STAU2	89	81.837	Ictidomys_tridecemlineatus
ENSCAPG00000017061	-	98	81.765	ENSJJAG00000020228	Stau2	99	91.900	Jaculus_jaculus
ENSCAPG00000017061	-	98	59.434	ENSKMAG00000006853	stau2	79	57.925	Kryptolebias_marmoratus
ENSCAPG00000017061	-	98	59.766	ENSLBEG00000014492	stau2	90	59.766	Labrus_bergylta
ENSCAPG00000017061	-	95	67.118	ENSLACG00000006873	STAU2	96	68.012	Latimeria_chalumnae
ENSCAPG00000017061	-	98	49.711	ENSLOCG00000003717	stau2	82	49.711	Lepisosteus_oculatus
ENSCAPG00000017061	-	98	82.617	ENSLAFG00000013327	STAU2	89	82.617	Loxodonta_africana
ENSCAPG00000017061	-	98	81.445	ENSMFAG00000044834	STAU2	99	81.445	Macaca_fascicularis
ENSCAPG00000017061	-	93	69.915	ENSMFAG00000037793	-	93	79.322	Macaca_fascicularis
ENSCAPG00000017061	-	92	70.091	ENSMMUG00000048014	-	94	70.091	Macaca_mulatta
ENSCAPG00000017061	-	98	81.445	ENSMMUG00000021588	-	98	95.455	Macaca_mulatta
ENSCAPG00000017061	-	63	75.601	ENSMNEG00000004012	-	96	75.601	Macaca_nemestrina
ENSCAPG00000017061	-	98	81.641	ENSMNEG00000035325	STAU2	99	81.641	Macaca_nemestrina
ENSCAPG00000017061	-	93	69.556	ENSMLEG00000034013	-	99	76.282	Mandrillus_leucophaeus
ENSCAPG00000017061	-	98	81.445	ENSMLEG00000044427	STAU2	99	80.833	Mandrillus_leucophaeus
ENSCAPG00000017061	-	95	58.733	ENSMAMG00000023036	stau2	90	58.269	Mastacembelus_armatus
ENSCAPG00000017061	-	98	58.634	ENSMZEG00005021462	stau2	90	58.634	Maylandia_zebra
ENSCAPG00000017061	-	98	71.068	ENSMGAG00000011523	STAU2	80	72.656	Meleagris_gallopavo
ENSCAPG00000017061	-	98	68.410	ENSMAUG00000021644	Stau2	86	72.792	Mesocricetus_auratus
ENSCAPG00000017061	-	79	78.333	ENSMICG00000032397	-	97	79.310	Microcebus_murinus
ENSCAPG00000017061	-	98	81.250	ENSMICG00000002886	-	96	80.591	Microcebus_murinus
ENSCAPG00000017061	-	98	77.539	ENSMOCG00000001037	Stau2	98	96.739	Microtus_ochrogaster
ENSCAPG00000017061	-	95	59.309	ENSMMOG00000003579	stau2	90	58.960	Mola_mola
ENSCAPG00000017061	-	68	74.194	ENSMODG00000007112	-	99	74.194	Monodelphis_domestica
ENSCAPG00000017061	-	95	56.513	ENSMALG00000001524	stau2	87	56.513	Monopterus_albus
ENSCAPG00000017061	-	98	80.859	MGP_CAROLIEiJ_G0013967	Stau2	98	96.739	Mus_caroli
ENSCAPG00000017061	-	98	80.859	ENSMUSG00000025920	Stau2	98	96.739	Mus_musculus
ENSCAPG00000017061	-	98	80.273	MGP_PahariEiJ_G0023852	Stau2	99	95.652	Mus_pahari
ENSCAPG00000017061	-	98	80.859	MGP_SPRETEiJ_G0014772	Stau2	98	96.739	Mus_spretus
ENSCAPG00000017061	-	99	81.226	ENSMPUG00000010221	STAU2	85	81.226	Mustela_putorius_furo
ENSCAPG00000017061	-	98	81.836	ENSMLUG00000000592	STAU2	99	81.836	Myotis_lucifugus
ENSCAPG00000017061	-	98	81.641	ENSNGAG00000017873	Stau2	99	81.641	Nannospalax_galili
ENSCAPG00000017061	-	98	58.634	ENSNBRG00000023829	stau2	78	58.634	Neolamprologus_brichardi
ENSCAPG00000017061	-	98	80.784	ENSNLEG00000001342	STAU2	97	81.013	Nomascus_leucogenys
ENSCAPG00000017061	-	96	70.562	ENSNLEG00000036286	-	98	83.448	Nomascus_leucogenys
ENSCAPG00000017061	-	98	74.755	ENSOPRG00000008474	STAU2	90	74.755	Ochotona_princeps
ENSCAPG00000017061	-	98	83.008	ENSODEG00000003610	STAU2	99	83.008	Octodon_degus
ENSCAPG00000017061	-	98	58.824	ENSONIG00000014300	stau2	81	58.824	Oreochromis_niloticus
ENSCAPG00000017061	-	99	81.226	ENSOCUG00000013843	STAU2	85	81.226	Oryctolagus_cuniculus
ENSCAPG00000017061	-	98	58.015	ENSORLG00000007943	stau2	77	56.513	Oryzias_latipes
ENSCAPG00000017061	-	98	58.206	ENSORLG00020016648	stau2	78	58.397	Oryzias_latipes_hni
ENSCAPG00000017061	-	98	58.206	ENSORLG00015016882	stau2	95	58.397	Oryzias_latipes_hsok
ENSCAPG00000017061	-	98	57.678	ENSOMEG00000010542	stau2	82	58.444	Oryzias_melastigma
ENSCAPG00000017061	-	70	92.284	ENSOGAG00000001112	STAU2	86	92.284	Otolemur_garnettii
ENSCAPG00000017061	-	99	80.651	ENSOARG00000006011	STAU2	83	80.165	Ovis_aries
ENSCAPG00000017061	-	98	81.641	ENSPPAG00000034287	STAU2	99	81.641	Pan_paniscus
ENSCAPG00000017061	-	79	69.697	ENSPPAG00000041507	-	99	69.697	Pan_paniscus
ENSCAPG00000017061	-	98	82.422	ENSPPRG00000024814	STAU2	96	82.105	Panthera_pardus
ENSCAPG00000017061	-	98	82.422	ENSPTIG00000007856	STAU2	99	82.422	Panthera_tigris_altaica
ENSCAPG00000017061	-	62	75.958	ENSPTRG00000043384	-	99	76.655	Pan_troglodytes
ENSCAPG00000017061	-	94	61.149	ENSPTRG00000045302	-	96	61.538	Pan_troglodytes
ENSCAPG00000017061	-	98	81.250	ENSPTRG00000047797	STAU2	99	81.250	Pan_troglodytes
ENSCAPG00000017061	-	98	81.641	ENSPANG00000021222	STAU2	99	80.331	Papio_anubis
ENSCAPG00000017061	-	94	56.652	ENSPKIG00000006663	stau2	85	56.531	Paramormyrops_kingsleyae
ENSCAPG00000017061	-	98	70.485	ENSPSIG00000003686	STAU2	87	71.875	Pelodiscus_sinensis
ENSCAPG00000017061	-	98	57.714	ENSPMGG00000009011	stau2	83	57.524	Periophthalmus_magnuspinnatus
ENSCAPG00000017061	-	98	81.055	ENSPEMG00000012104	Stau2	99	81.055	Peromyscus_maniculatus_bairdii
ENSCAPG00000017061	-	92	53.878	ENSPMAG00000003826	stau2	80	53.131	Petromyzon_marinus
ENSCAPG00000017061	-	98	67.843	ENSPCIG00000012872	STAU2	80	67.843	Phascolarctos_cinereus
ENSCAPG00000017061	-	98	57.143	ENSPFOG00000013147	stau2	79	57.331	Poecilia_formosa
ENSCAPG00000017061	-	63	64.014	ENSPLAG00000008809	stau2	83	64.706	Poecilia_latipinna
ENSCAPG00000017061	-	50	48.746	ENSPLAG00000009029	stau2	71	48.746	Poecilia_latipinna
ENSCAPG00000017061	-	98	58.153	ENSPMEG00000014168	stau2	81	57.331	Poecilia_mexicana
ENSCAPG00000017061	-	98	57.439	ENSPREG00000017795	stau2	79	57.627	Poecilia_reticulata
ENSCAPG00000017061	-	99	73.755	ENSPPYG00000018674	STAU2	85	73.755	Pongo_abelii
ENSCAPG00000017061	-	98	72.266	ENSPCAG00000004679	STAU2	99	72.266	Procavia_capensis
ENSCAPG00000017061	-	98	67.987	ENSPCOG00000011840	STAU2	99	67.987	Propithecus_coquereli
ENSCAPG00000017061	-	90	91.277	ENSPVAG00000014575	STAU2	80	91.277	Pteropus_vampyrus
ENSCAPG00000017061	-	98	58.634	ENSPNYG00000001132	stau2	90	58.634	Pundamilia_nyererei
ENSCAPG00000017061	-	98	61.988	ENSPNAG00000023606	stau2	89	61.988	Pygocentrus_nattereri
ENSCAPG00000017061	-	98	72.222	ENSRNOG00000042458	AABR07046707.1	99	88.820	Rattus_norvegicus
ENSCAPG00000017061	-	99	80.268	ENSRBIG00000034859	-	99	79.959	Rhinopithecus_bieti
ENSCAPG00000017061	-	72	78.512	ENSRROG00000039882	-	94	78.571	Rhinopithecus_roxellana
ENSCAPG00000017061	-	67	61.022	ENSRROG00000029227	-	79	61.661	Rhinopithecus_roxellana
ENSCAPG00000017061	-	98	81.836	ENSSBOG00000032091	STAU2	99	81.836	Saimiri_boliviensis_boliviensis
ENSCAPG00000017061	-	60	73.358	ENSSHAG00000012057	-	90	73.358	Sarcophilus_harrisii
ENSCAPG00000017061	-	98	58.882	ENSSFOG00015012905	stau2	89	59.155	Scleropages_formosus
ENSCAPG00000017061	-	95	58.812	ENSSMAG00000016487	stau2	81	58.812	Scophthalmus_maximus
ENSCAPG00000017061	-	95	59.387	ENSSDUG00000012535	stau2	89	58.027	Seriola_dumerili
ENSCAPG00000017061	-	95	59.653	ENSSLDG00000007156	stau2	89	58.994	Seriola_lalandi_dorsalis
ENSCAPG00000017061	-	67	94.144	ENSSARG00000009750	-	60	94.144	Sorex_araneus
ENSCAPG00000017061	-	83	72.362	ENSSPUG00000018208	STAU2	82	70.277	Sphenodon_punctatus
ENSCAPG00000017061	-	98	58.824	ENSSPAG00000000291	stau2	88	57.671	Stegastes_partitus
ENSCAPG00000017061	-	98	81.836	ENSSSCG00000006179	-	94	92.857	Sus_scrofa
ENSCAPG00000017061	-	98	70.097	ENSTGUG00000011535	STAU2	89	71.875	Taeniopygia_guttata
ENSCAPG00000017061	-	98	57.386	ENSTRUG00000001905	stau2	89	57.386	Takifugu_rubripes
ENSCAPG00000017061	-	95	50.702	ENSTNIG00000008181	stau2	96	50.622	Tetraodon_nigroviridis
ENSCAPG00000017061	-	98	81.055	ENSTBEG00000016245	STAU2	89	81.055	Tupaia_belangeri
ENSCAPG00000017061	-	90	92.476	ENSTTRG00000009236	STAU2	80	92.835	Tursiops_truncatus
ENSCAPG00000017061	-	99	81.226	ENSUMAG00000018908	STAU2	98	81.250	Ursus_maritimus
ENSCAPG00000017061	-	97	82.157	ENSVPAG00000001523	STAU2	89	82.157	Vicugna_pacos
ENSCAPG00000017061	-	98	82.422	ENSVVUG00000019217	-	97	82.068	Vulpes_vulpes
ENSCAPG00000017061	-	97	62.327	ENSXETG00000011826	stau2	77	69.620	Xenopus_tropicalis
ENSCAPG00000017061	-	69	62.428	ENSXCOG00000007032	stau2	84	62.428	Xiphophorus_couchianus
ENSCAPG00000017061	-	98	60.355	ENSXMAG00000010426	stau2	98	59.961	Xiphophorus_maculatus