EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017085 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 19235 bases
Position: chrAVPZ01000445.1:6020530-6039764
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017418	OAS1_C	PF10421.9	4.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021224	-	1245	-	ENSCAPP00000017418	414 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017085	-	54	35.632	ENSCAPG00000008640	OAS2	50	35.443
ENSCAPG00000017085	-	65	37.805	ENSCAPG00000006829	-	75	38.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017085	-	54	48.000	ENSG00000111331	OAS3	52	47.826	Homo_sapiens
ENSCAPG00000017085	-	76	80.645	ENSG00000135114	OASL	73	83.051	Homo_sapiens
ENSCAPG00000017085	-	55	49.624	ENSAMEG00000008347	-	73	49.248	Ailuropoda_melanoleuca
ENSCAPG00000017085	-	50	42.276	ENSBTAG00000003297	OASL	70	41.057	Bos_taurus
ENSCAPG00000017085	-	84	66.467	ENSCJAG00000043836	OASL	100	66.467	Callithrix_jacchus
ENSCAPG00000017085	-	99	45.543	ENSCAFG00000010511	OASL	99	45.155	Canis_familiaris
ENSCAPG00000017085	-	97	41.573	ENSCAFG00000024447	OASL	52	55.789	Canis_familiaris
ENSCAPG00000017085	-	97	41.573	ENSCAFG00020020855	-	52	55.789	Canis_lupus_dingo
ENSCAPG00000017085	-	99	45.930	ENSCAFG00020020845	OASL	99	45.155	Canis_lupus_dingo
ENSCAPG00000017085	-	50	41.736	ENSCHIG00000017422	-	68	39.583	Capra_hircus
ENSCAPG00000017085	-	84	66.867	ENSTSYG00000009320	OASL	100	66.867	Carlito_syrichta
ENSCAPG00000017085	-	100	64.922	ENSCPOG00000007251	OASL	97	64.535	Cavia_porcellus
ENSCAPG00000017085	-	52	35.636	ENSCPOG00000038269	-	99	35.636	Cavia_porcellus
ENSCAPG00000017085	-	84	68.862	ENSCCAG00000028044	OASL	71	88.000	Cebus_capucinus
ENSCAPG00000017085	-	84	71.515	ENSCATG00000034860	OASL	99	71.515	Cercocebus_atys
ENSCAPG00000017085	-	68	38.416	ENSCLAG00000012712	-	78	38.710	Chinchilla_lanigera
ENSCAPG00000017085	-	99	58.447	ENSCLAG00000013631	OASL	99	58.252	Chinchilla_lanigera
ENSCAPG00000017085	-	99	49.419	ENSCSAG00000002221	OASL	99	49.225	Chlorocebus_sabaeus
ENSCAPG00000017085	-	83	70.690	ENSCHOG00000003162	OASL	80	70.690	Choloepus_hoffmanni
ENSCAPG00000017085	-	84	68.862	ENSCANG00000029168	OASL	99	69.697	Colobus_angolensis_palliatus
ENSCAPG00000017085	-	98	50.877	ENSCGRG00001021080	Oasl1	78	76.923	Cricetulus_griseus_chok1gshd
ENSCAPG00000017085	-	97	45.395	ENSCGRG00001017055	Oasl2	99	45.395	Cricetulus_griseus_chok1gshd
ENSCAPG00000017085	-	97	45.395	ENSCGRG00000015082	Oasl2	99	45.395	Cricetulus_griseus_crigri
ENSCAPG00000017085	-	98	50.965	ENSCGRG00000006960	Oasl1	98	51.277	Cricetulus_griseus_crigri
ENSCAPG00000017085	-	96	44.571	ENSDNOG00000048828	-	91	38.024	Dasypus_novemcinctus
ENSCAPG00000017085	-	99	48.837	ENSDNOG00000035785	OASL	80	72.414	Dasypus_novemcinctus
ENSCAPG00000017085	-	98	45.930	ENSETEG00000015102	OASL	77	62.069	Echinops_telfairi
ENSCAPG00000017085	-	89	65.591	ENSEASG00005004445	OASL	98	50.000	Equus_asinus_asinus
ENSCAPG00000017085	-	61	62.105	ENSEASG00005004436	-	50	62.105	Equus_asinus_asinus
ENSCAPG00000017085	-	98	39.394	ENSECAG00000012132	-	88	39.394	Equus_caballus
ENSCAPG00000017085	-	88	65.591	ENSECAG00000014645	OASL	98	49.802	Equus_caballus
ENSCAPG00000017085	-	72	70.000	ENSEEUG00000008275	-	57	70.000	Erinaceus_europaeus
ENSCAPG00000017085	-	99	45.251	ENSFCAG00000032891	-	98	45.251	Felis_catus
ENSCAPG00000017085	-	98	49.409	ENSFCAG00000009641	OASL	98	49.016	Felis_catus
ENSCAPG00000017085	-	98	32.121	ENSFALG00000008796	OASL	62	33.133	Ficedula_albicollis
ENSCAPG00000017085	-	100	53.510	ENSFDAG00000014734	OASL	100	55.706	Fukomys_damarensis
ENSCAPG00000017085	-	98	32.479	ENSFDAG00000012294	-	90	40.196	Fukomys_damarensis
ENSCAPG00000017085	-	65	35.000	ENSGAGG00000013495	-	65	35.312	Gopherus_agassizii
ENSCAPG00000017085	-	84	70.482	ENSGGOG00000012123	OASL	73	83.051	Gorilla_gorilla
ENSCAPG00000017085	-	99	55.067	ENSHGLG00000011746	OASL	99	55.837	Heterocephalus_glaber_female
ENSCAPG00000017085	-	98	34.578	ENSHGLG00000011274	-	100	34.185	Heterocephalus_glaber_female
ENSCAPG00000017085	-	99	54.876	ENSHGLG00100016878	OASL	99	55.642	Heterocephalus_glaber_male
ENSCAPG00000017085	-	98	34.578	ENSHGLG00100014127	-	100	34.185	Heterocephalus_glaber_male
ENSCAPG00000017085	-	98	50.295	ENSJJAG00000022289	Oasl1	98	50.295	Jaculus_jaculus
ENSCAPG00000017085	-	69	32.986	ENSLACG00000017511	-	67	31.944	Latimeria_chalumnae
ENSCAPG00000017085	-	99	47.719	ENSLAFG00000017892	OASL	98	47.784	Loxodonta_africana
ENSCAPG00000017085	-	84	70.303	ENSMFAG00000043280	OASL	99	70.303	Macaca_fascicularis
ENSCAPG00000017085	-	84	69.091	ENSMMUG00000006441	OASL	99	69.091	Macaca_mulatta
ENSCAPG00000017085	-	84	69.697	ENSMNEG00000029657	OASL	99	69.697	Macaca_nemestrina
ENSCAPG00000017085	-	84	71.515	ENSMLEG00000037980	OASL	99	71.515	Mandrillus_leucophaeus
ENSCAPG00000017085	-	54	51.736	ENSMAUG00000016905	-	97	51.736	Mesocricetus_auratus
ENSCAPG00000017085	-	98	44.291	ENSMICG00000046728	OASL	69	82.000	Microcebus_murinus
ENSCAPG00000017085	-	96	35.878	ENSMOCG00000019431	Oasl2	57	57.447	Microtus_ochrogaster
ENSCAPG00000017085	-	98	51.081	ENSMOCG00000013643	Oasl1	98	50.098	Microtus_ochrogaster
ENSCAPG00000017085	-	99	35.714	ENSMODG00000002922	-	66	35.714	Monodelphis_domestica
ENSCAPG00000017085	-	96	43.655	MGP_CAROLIEiJ_G0027608	Oasl2	57	55.789	Mus_caroli
ENSCAPG00000017085	-	99	50.394	MGP_CAROLIEiJ_G0027609	Oasl1	99	46.169	Mus_caroli
ENSCAPG00000017085	-	96	43.077	ENSMUSG00000029561	Oasl2	56	55.789	Mus_musculus
ENSCAPG00000017085	-	99	50.197	ENSMUSG00000041827	Oasl1	99	47.140	Mus_musculus
ENSCAPG00000017085	-	99	48.549	MGP_PahariEiJ_G0024189	Oasl1	78	69.091	Mus_pahari
ENSCAPG00000017085	-	96	43.590	MGP_SPRETEiJ_G0028606	Oasl2	56	55.789	Mus_spretus
ENSCAPG00000017085	-	99	50.591	MGP_SPRETEiJ_G0028607	Oasl1	99	47.535	Mus_spretus
ENSCAPG00000017085	-	96	34.400	ENSMPUG00000003310	-	98	37.425	Mustela_putorius_furo
ENSCAPG00000017085	-	99	46.318	ENSMPUG00000003306	OASL	99	45.736	Mustela_putorius_furo
ENSCAPG00000017085	-	84	72.727	ENSMLUG00000009136	OASL	76	70.690	Myotis_lucifugus
ENSCAPG00000017085	-	96	33.747	ENSNGAG00000019818	Oasl2	98	32.712	Nannospalax_galili
ENSCAPG00000017085	-	98	50.884	ENSNGAG00000016822	Oasl1	98	50.884	Nannospalax_galili
ENSCAPG00000017085	-	84	69.277	ENSNLEG00000027642	OASL	73	81.356	Nomascus_leucogenys
ENSCAPG00000017085	-	65	41.867	ENSMEUG00000002104	-	98	41.867	Notamacropus_eugenii
ENSCAPG00000017085	-	67	52.924	ENSOPRG00000010324	-	77	52.312	Ochotona_princeps
ENSCAPG00000017085	-	97	34.861	ENSODEG00000006462	-	99	39.339	Octodon_degus
ENSCAPG00000017085	-	99	56.420	ENSODEG00000006970	OASL	99	55.837	Octodon_degus
ENSCAPG00000017085	-	99	48.062	ENSOCUG00000029328	OASL	99	47.582	Oryctolagus_cuniculus
ENSCAPG00000017085	-	92	45.977	ENSOCUG00000029637	-	78	45.977	Oryctolagus_cuniculus
ENSCAPG00000017085	-	65	51.515	ENSOGAG00000030882	-	57	47.541	Otolemur_garnettii
ENSCAPG00000017085	-	93	39.264	ENSOARG00000013935	OASL	99	36.550	Ovis_aries
ENSCAPG00000017085	-	84	70.732	ENSPPAG00000036073	OASL	73	81.356	Pan_paniscus
ENSCAPG00000017085	-	98	49.310	ENSPPRG00000023710	OASL	98	48.915	Panthera_pardus
ENSCAPG00000017085	-	99	35.478	ENSPPRG00000023601	-	98	38.643	Panthera_pardus
ENSCAPG00000017085	-	82	68.354	ENSPTIG00000017787	OASL	99	68.354	Panthera_tigris_altaica
ENSCAPG00000017085	-	99	35.478	ENSPTIG00000020051	-	98	38.643	Panthera_tigris_altaica
ENSCAPG00000017085	-	84	69.880	ENSPTRG00000005553	OASL	73	81.356	Pan_troglodytes
ENSCAPG00000017085	-	84	70.909	ENSPANG00000002378	OASL	99	70.909	Papio_anubis
ENSCAPG00000017085	-	98	50.098	ENSPEMG00000016063	Oasl1	76	74.074	Peromyscus_maniculatus_bairdii
ENSCAPG00000017085	-	97	36.811	ENSPCIG00000007839	-	94	41.471	Phascolarctos_cinereus
ENSCAPG00000017085	-	65	35.256	ENSPCIG00000007837	-	73	44.681	Phascolarctos_cinereus
ENSCAPG00000017085	-	100	49.612	ENSPPYG00000005044	OASL	80	70.175	Pongo_abelii
ENSCAPG00000017085	-	89	57.471	ENSPCAG00000013000	OASL	77	67.308	Procavia_capensis
ENSCAPG00000017085	-	82	62.264	ENSPCOG00000026188	OASL	99	62.264	Propithecus_coquereli
ENSCAPG00000017085	-	95	58.261	ENSPVAG00000008047	OASL	87	58.261	Pteropus_vampyrus
ENSCAPG00000017085	-	98	33.201	ENSRNOG00000028814	Oasl2	99	34.538	Rattus_norvegicus
ENSCAPG00000017085	-	98	50.296	ENSRNOG00000001187	Oasl	67	56.522	Rattus_norvegicus
ENSCAPG00000017085	-	54	80.645	ENSRBIG00000008349	OASL	71	83.051	Rhinopithecus_bieti
ENSCAPG00000017085	-	84	69.461	ENSRROG00000035890	OASL	100	48.936	Rhinopithecus_roxellana
ENSCAPG00000017085	-	84	68.263	ENSSBOG00000035582	OASL	74	79.661	Saimiri_boliviensis_boliviensis
ENSCAPG00000017085	-	65	37.015	ENSSHAG00000014676	-	68	37.389	Sarcophilus_harrisii
ENSCAPG00000017085	-	66	64.865	ENSSHAG00000014420	-	99	35.938	Sarcophilus_harrisii
ENSCAPG00000017085	-	93	45.588	ENSSARG00000010081	OASL	99	45.588	Sorex_araneus
ENSCAPG00000017085	-	89	34.274	ENSSPUG00000001562	OASL	50	62.500	Sphenodon_punctatus
ENSCAPG00000017085	-	65	32.530	ENSTGUG00000006574	OASL	66	32.530	Taeniopygia_guttata
ENSCAPG00000017085	-	56	48.980	ENSTBEG00000007593	OASL	65	48.814	Tupaia_belangeri
ENSCAPG00000017085	-	51	34.831	ENSUAMG00000022495	-	55	34.831	Ursus_americanus
ENSCAPG00000017085	-	99	47.093	ENSUAMG00000022496	OASL	99	47.093	Ursus_americanus
ENSCAPG00000017085	-	99	42.369	ENSUMAG00000005863	OASL	70	72.414	Ursus_maritimus
ENSCAPG00000017085	-	98	37.952	ENSUMAG00000005858	-	78	50.820	Ursus_maritimus
ENSCAPG00000017085	-	91	50.000	ENSVPAG00000008967	OASL	80	50.000	Vicugna_pacos
ENSCAPG00000017085	-	99	45.243	ENSVVUG00000021628	OASL	78	68.966	Vulpes_vulpes
ENSCAPG00000017085	-	97	42.135	ENSVVUG00000021631	-	98	36.202	Vulpes_vulpes