EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAPG00000017175 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Minus strand
Length: 1673 bases
Position: chrAVPZ01000167.1:13806830-13808502
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017536	Ribosomal_L6	PF00347.23	3.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021342	-	267	-	ENSCAPP00000017536	89 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017175	-	100	98.876	ENSG00000163682	RPL9	54	98.876	Homo_sapiens
ENSCAPG00000017175	-	100	95.506	ENSAPLG00000011712	RPL9	51	95.506	Anas_platyrhynchos
ENSCAPG00000017175	-	100	85.393	ENSANAG00000028192	-	50	85.393	Aotus_nancymaae
ENSCAPG00000017175	-	100	94.382	ENSANAG00000025368	-	51	94.382	Aotus_nancymaae
ENSCAPG00000017175	-	100	66.667	ENSANAG00000024659	-	66	66.667	Aotus_nancymaae
ENSCAPG00000017175	-	100	96.629	ENSCCAG00000019506	-	51	96.629	Cebus_capucinus
ENSCAPG00000017175	-	100	98.876	ENSCCAG00000000333	RPL9	54	98.876	Cebus_capucinus
ENSCAPG00000017175	-	100	80.899	ENSCATG00000031517	-	51	80.899	Cercocebus_atys
ENSCAPG00000017175	-	100	100.000	ENSCLAG00000001418	-	53	100.000	Chinchilla_lanigera
ENSCAPG00000017175	-	100	83.146	ENSCLAG00000009325	-	54	83.146	Chinchilla_lanigera
ENSCAPG00000017175	-	99	64.773	ENSCSAVG00000006454	-	61	64.773	Ciona_savignyi
ENSCAPG00000017175	-	100	98.876	ENSCANG00000029652	-	54	98.876	Colobus_angolensis_palliatus
ENSCAPG00000017175	-	100	93.258	ENSCGRG00001020965	-	55	81.034	Cricetulus_griseus_chok1gshd
ENSCAPG00000017175	-	82	98.630	ENSCGRG00001008572	-	64	98.630	Cricetulus_griseus_chok1gshd
ENSCAPG00000017175	-	100	88.889	ENSCGRG00001006653	-	51	92.222	Cricetulus_griseus_chok1gshd
ENSCAPG00000017175	-	100	98.876	ENSCGRG00000003666	-	52	81.034	Cricetulus_griseus_crigri
ENSCAPG00000017175	-	100	64.045	ENSDNOG00000032325	-	62	64.045	Dasypus_novemcinctus
ENSCAPG00000017175	-	57	86.275	ENSECAG00000029016	-	50	86.275	Equus_caballus
ENSCAPG00000017175	-	100	98.876	ENSEEUG00000004394	RPL9	57	98.876	Erinaceus_europaeus
ENSCAPG00000017175	-	94	85.714	ENSEEUG00000000368	-	67	85.714	Erinaceus_europaeus
ENSCAPG00000017175	-	60	81.132	ENSFCAG00000036586	-	50	81.132	Felis_catus
ENSCAPG00000017175	-	100	100.000	ENSFDAG00000013998	-	53	100.000	Fukomys_damarensis
ENSCAPG00000017175	-	100	88.764	ENSGGOG00000024529	-	53	88.764	Gorilla_gorilla
ENSCAPG00000017175	-	100	95.506	ENSHGLG00000003222	-	51	95.506	Heterocephalus_glaber_female
ENSCAPG00000017175	-	100	95.506	ENSHGLG00100019348	-	51	95.506	Heterocephalus_glaber_male
ENSCAPG00000017175	-	100	76.404	ENSLAFG00000027505	-	51	76.404	Loxodonta_africana
ENSCAPG00000017175	-	100	98.876	ENSMMUG00000008553	RPL9	54	98.876	Macaca_mulatta
ENSCAPG00000017175	-	64	79.661	ENSMNEG00000010083	-	53	79.661	Macaca_nemestrina
ENSCAPG00000017175	-	100	80.899	ENSMNEG00000033519	-	52	80.899	Macaca_nemestrina
ENSCAPG00000017175	-	100	83.333	ENSMLEG00000014598	-	65	83.333	Mandrillus_leucophaeus
ENSCAPG00000017175	-	100	92.135	ENSMAUG00000018199	-	51	92.135	Mesocricetus_auratus
ENSCAPG00000017175	-	60	77.358	ENSMICG00000048936	-	52	77.358	Microcebus_murinus
ENSCAPG00000017175	-	100	91.011	ENSMICG00000046687	-	53	91.011	Microcebus_murinus
ENSCAPG00000017175	-	61	81.481	MGP_CAROLIEiJ_G0027247	-	62	100.000	Mus_caroli
ENSCAPG00000017175	-	100	98.876	ENSMUSG00000047215	Rpl9	68	100.000	Mus_musculus
ENSCAPG00000017175	-	100	98.876	MGP_PahariEiJ_G0017029	-	69	100.000	Mus_pahari
ENSCAPG00000017175	-	100	98.876	MGP_SPRETEiJ_G0028242	-	69	100.000	Mus_spretus
ENSCAPG00000017175	-	87	87.013	MGP_SPRETEiJ_G0015311	-	65	87.013	Mus_spretus
ENSCAPG00000017175	-	99	88.636	ENSMPUG00000010590	-	58	88.636	Mustela_putorius_furo
ENSCAPG00000017175	-	100	62.921	ENSMLUG00000025668	-	58	62.921	Myotis_lucifugus
ENSCAPG00000017175	-	100	98.876	ENSNGAG00000023169	-	54	98.876	Nannospalax_galili
ENSCAPG00000017175	-	85	76.316	ENSNLEG00000029075	-	53	78.571	Nomascus_leucogenys
ENSCAPG00000017175	-	66	79.661	ENSNLEG00000032007	-	51	79.661	Nomascus_leucogenys
ENSCAPG00000017175	-	100	96.629	ENSODEG00000009562	-	52	96.629	Octodon_degus
ENSCAPG00000017175	-	100	100.000	ENSODEG00000003855	-	53	100.000	Octodon_degus
ENSCAPG00000017175	-	100	74.157	ENSOCUG00000023206	-	62	74.157	Oryctolagus_cuniculus
ENSCAPG00000017175	-	100	95.506	ENSOCUG00000025270	-	54	95.506	Oryctolagus_cuniculus
ENSCAPG00000017175	-	97	59.302	ENSOCUG00000017944	-	57	59.302	Oryctolagus_cuniculus
ENSCAPG00000017175	-	97	91.860	ENSOGAG00000025369	-	58	91.860	Otolemur_garnettii
ENSCAPG00000017175	-	100	91.011	ENSOGAG00000027169	-	61	91.011	Otolemur_garnettii
ENSCAPG00000017175	-	87	83.117	ENSPPAG00000035534	-	52	83.117	Pan_paniscus
ENSCAPG00000017175	-	100	60.000	ENSPPRG00000013850	-	63	60.000	Panthera_pardus
ENSCAPG00000017175	-	92	92.683	ENSPTRG00000049459	-	50	92.683	Pan_troglodytes
ENSCAPG00000017175	-	84	92.000	ENSPTRG00000046993	-	55	92.857	Pan_troglodytes
ENSCAPG00000017175	-	100	98.876	ENSPANG00000003718	-	51	98.876	Papio_anubis
ENSCAPG00000017175	-	100	98.876	ENSPEMG00000017878	-	54	98.876	Peromyscus_maniculatus_bairdii
ENSCAPG00000017175	-	87	85.714	ENSPMAG00000002765	rpl9	55	85.714	Petromyzon_marinus
ENSCAPG00000017175	-	73	68.657	ENSPCIG00000029909	-	61	68.657	Phascolarctos_cinereus
ENSCAPG00000017175	-	100	88.764	ENSPCIG00000006853	-	54	88.764	Phascolarctos_cinereus
ENSCAPG00000017175	-	100	98.876	ENSRROG00000045039	-	51	98.876	Rhinopithecus_roxellana
ENSCAPG00000017175	-	88	79.487	ENSSSCG00000034097	-	66	79.487	Sus_scrofa
ENSCAPG00000017175	-	100	91.011	ENSUAMG00000014494	-	56	91.011	Ursus_americanus
ENSCAPG00000017175	-	83	86.486	ENSUMAG00000011460	-	54	88.095	Ursus_maritimus