EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAPG00000017296 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Cavia_aperea
Status: putative
Strand: Plus strand
Length: 53768 bases
Position: chrAVPZ01000111.1:16308259-16362026
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAPP00000017716	zf-C2H2	PF00096.26	1.2e-16	1	2
ENSCAPP00000017716	zf-C2H2	PF00096.26	1.2e-16	2	2
ENSCAPP00000017709	zf-C2H2	PF00096.26	2.3e-16	1	2
ENSCAPP00000017709	zf-C2H2	PF00096.26	2.3e-16	2	2
ENSCAPP00000017716	zf-met	PF12874.7	3.6e-08	1	2
ENSCAPP00000017716	zf-met	PF12874.7	3.6e-08	2	2
ENSCAPP00000017709	zf-met	PF12874.7	3.4e-06	1	2
ENSCAPP00000017709	zf-met	PF12874.7	3.4e-06	2	2
ENSCAPP00000017716	zf-C2H2_jaz	PF12171.8	1.2e-13	1	1
ENSCAPP00000017709	zf-C2H2_jaz	PF12171.8	8.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAPT00000021521	PRDM10-202	921	-	ENSCAPP00000017713	307 (aa)	-	-
ENSCAPT00000021517	PRDM10-201	3324	-	ENSCAPP00000017709	1107 (aa)	-	-
ENSCAPT00000021524	PRDM10-203	3144	-	ENSCAPP00000017716	1047 (aa)	-	-

Gene Model

Click here to download ENSCAPG00000017296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAPG00000017296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAPG00000017296	PRDM10	52	30.556	ENSCAPG00000003129	-	74	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAPG00000017296	PRDM10	98	87.638	ENSG00000170325	PRDM10	100	85.458	Homo_sapiens
ENSCAPG00000017296	PRDM10	97	91.379	ENSAMEG00000002425	PRDM10	97	87.903	Ailuropoda_melanoleuca
ENSCAPG00000017296	PRDM10	100	77.284	ENSAPLG00000004858	PRDM10	100	77.028	Anas_platyrhynchos
ENSCAPG00000017296	PRDM10	100	81.256	ENSANAG00000022064	PRDM10	100	81.609	Aotus_nancymaae
ENSCAPG00000017296	PRDM10	97	89.655	ENSBTAG00000019001	PRDM10	100	84.820	Bos_taurus
ENSCAPG00000017296	PRDM10	100	86.847	ENSCJAG00000009235	PRDM10	100	86.847	Callithrix_jacchus
ENSCAPG00000017296	PRDM10	98	87.702	ENSCAFG00000010164	PRDM10	100	85.590	Canis_familiaris
ENSCAPG00000017296	PRDM10	98	87.600	ENSCAFG00020010152	PRDM10	100	85.506	Canis_lupus_dingo
ENSCAPG00000017296	PRDM10	98	87.097	ENSCHIG00000026530	PRDM10	100	84.734	Capra_hircus
ENSCAPG00000017296	PRDM10	98	88.543	ENSTSYG00000000544	PRDM10	100	86.313	Carlito_syrichta
ENSCAPG00000017296	PRDM10	100	95.875	ENSCPOG00000000389	PRDM10	100	95.875	Cavia_porcellus
ENSCAPG00000017296	PRDM10	98	87.928	ENSCCAG00000024567	PRDM10	100	85.702	Cebus_capucinus
ENSCAPG00000017296	PRDM10	100	86.922	ENSCATG00000040031	PRDM10	100	87.271	Cercocebus_atys
ENSCAPG00000017296	PRDM10	100	88.642	ENSCLAG00000014605	PRDM10	100	88.984	Chinchilla_lanigera
ENSCAPG00000017296	PRDM10	98	88.318	ENSCSAG00000002202	PRDM10	100	86.204	Chlorocebus_sabaeus
ENSCAPG00000017296	PRDM10	98	79.960	ENSCPBG00000026880	PRDM10	99	72.690	Chrysemys_picta_bellii
ENSCAPG00000017296	PRDM10	98	88.129	ENSCANG00000032669	PRDM10	100	85.702	Colobus_angolensis_palliatus
ENSCAPG00000017296	PRDM10	100	85.357	ENSCGRG00001021647	Prdm10	98	85.185	Cricetulus_griseus_chok1gshd
ENSCAPG00000017296	PRDM10	100	85.357	ENSCGRG00000006562	Prdm10	98	85.185	Cricetulus_griseus_crigri
ENSCAPG00000017296	PRDM10	81	84.183	ENSDNOG00000001366	PRDM10	95	84.079	Dasypus_novemcinctus
ENSCAPG00000017296	PRDM10	97	91.379	ENSDORG00000014292	Prdm10	100	85.924	Dipodomys_ordii
ENSCAPG00000017296	PRDM10	98	88.306	ENSEASG00005022914	PRDM10	100	86.216	Equus_asinus_asinus
ENSCAPG00000017296	PRDM10	100	87.035	ENSECAG00000011499	PRDM10	100	87.035	Equus_caballus
ENSCAPG00000017296	PRDM10	97	91.379	ENSFCAG00000004111	PRDM10	96	86.276	Felis_catus
ENSCAPG00000017296	PRDM10	97	80.402	ENSFALG00000004873	PRDM10	100	72.208	Ficedula_albicollis
ENSCAPG00000017296	PRDM10	100	86.436	ENSFDAG00000017311	PRDM10	100	85.762	Fukomys_damarensis
ENSCAPG00000017296	PRDM10	97	80.361	ENSGALG00000033660	PRDM10	99	77.886	Gallus_gallus
ENSCAPG00000017296	PRDM10	98	60.000	ENSGACG00000012293	prdm10	99	56.021	Gasterosteus_aculeatus
ENSCAPG00000017296	PRDM10	98	78.679	ENSGAGG00000012523	PRDM10	99	75.765	Gopherus_agassizii
ENSCAPG00000017296	PRDM10	100	86.881	ENSGGOG00000015359	PRDM10	100	86.881	Gorilla_gorilla
ENSCAPG00000017296	PRDM10	100	87.097	ENSHGLG00000001106	PRDM10	100	87.267	Heterocephalus_glaber_female
ENSCAPG00000017296	PRDM10	100	87.415	ENSHGLG00100002350	PRDM10	100	87.330	Heterocephalus_glaber_male
ENSCAPG00000017296	PRDM10	100	86.301	ENSSTOG00000002015	PRDM10	100	86.473	Ictidomys_tridecemlineatus
ENSCAPG00000017296	PRDM10	81	85.291	ENSJJAG00000021493	Prdm10	90	84.855	Jaculus_jaculus
ENSCAPG00000017296	PRDM10	100	82.823	ENSLAFG00000031867	PRDM10	100	82.653	Loxodonta_africana
ENSCAPG00000017296	PRDM10	100	87.010	ENSMFAG00000031008	PRDM10	100	87.358	Macaca_fascicularis
ENSCAPG00000017296	PRDM10	100	87.010	ENSMMUG00000017555	PRDM10	100	87.358	Macaca_mulatta
ENSCAPG00000017296	PRDM10	100	86.922	ENSMNEG00000036493	PRDM10	100	87.271	Macaca_nemestrina
ENSCAPG00000017296	PRDM10	92	100.000	ENSMLEG00000042028	PRDM10	91	100.000	Mandrillus_leucophaeus
ENSCAPG00000017296	PRDM10	97	80.201	ENSMGAG00000001112	PRDM10	100	72.599	Meleagris_gallopavo
ENSCAPG00000017296	PRDM10	98	87.915	ENSMICG00000013888	PRDM10	100	85.947	Microcebus_murinus
ENSCAPG00000017296	PRDM10	98	87.438	ENSMOCG00000021853	Prdm10	100	84.968	Microtus_ochrogaster
ENSCAPG00000017296	PRDM10	81	79.533	ENSMODG00000004979	PRDM10	99	68.852	Monodelphis_domestica
ENSCAPG00000017296	PRDM10	100	85.422	ENSMUSG00000042496	Prdm10	100	85.251	Mus_musculus
ENSCAPG00000017296	PRDM10	100	85.481	MGP_SPRETEiJ_G0033061	-	100	85.309	Mus_spretus
ENSCAPG00000017296	PRDM10	98	87.702	ENSMPUG00000008711	PRDM10	99	85.249	Mustela_putorius_furo
ENSCAPG00000017296	PRDM10	100	84.274	ENSMLUG00000013051	PRDM10	100	83.846	Myotis_lucifugus
ENSCAPG00000017296	PRDM10	100	85.838	ENSNGAG00000000580	Prdm10	100	86.630	Nannospalax_galili
ENSCAPG00000017296	PRDM10	100	86.748	ENSNLEG00000007488	PRDM10	100	87.097	Nomascus_leucogenys
ENSCAPG00000017296	PRDM10	99	89.631	ENSODEG00000005309	PRDM10	100	87.596	Octodon_degus
ENSCAPG00000017296	PRDM10	98	76.809	ENSOANG00000000577	-	100	73.395	Ornithorhynchus_anatinus
ENSCAPG00000017296	PRDM10	100	84.206	ENSOCUG00000003736	PRDM10	100	84.120	Oryctolagus_cuniculus
ENSCAPG00000017296	PRDM10	98	87.763	ENSOGAG00000010723	PRDM10	100	85.141	Otolemur_garnettii
ENSCAPG00000017296	PRDM10	98	87.298	ENSOARG00000014507	PRDM10	100	84.906	Ovis_aries
ENSCAPG00000017296	PRDM10	100	86.707	ENSPPAG00000042881	PRDM10	100	86.707	Pan_paniscus
ENSCAPG00000017296	PRDM10	97	91.379	ENSPPRG00000007002	PRDM10	100	85.849	Panthera_pardus
ENSCAPG00000017296	PRDM10	97	91.379	ENSPTIG00000013331	PRDM10	100	85.763	Panthera_tigris_altaica
ENSCAPG00000017296	PRDM10	100	86.794	ENSPTRG00000004477	PRDM10	100	86.794	Pan_troglodytes
ENSCAPG00000017296	PRDM10	100	86.922	ENSPANG00000017470	PRDM10	100	87.271	Papio_anubis
ENSCAPG00000017296	PRDM10	100	86.204	ENSPEMG00000014985	Prdm10	100	86.118	Peromyscus_maniculatus_bairdii
ENSCAPG00000017296	PRDM10	98	88.040	ENSPPYG00000004061	PRDM10	100	85.800	Pongo_abelii
ENSCAPG00000017296	PRDM10	90	96.364	ENSPCAG00000014514	PRDM10	92	96.364	Procavia_capensis
ENSCAPG00000017296	PRDM10	100	80.691	ENSPCOG00000023406	PRDM10	100	81.311	Propithecus_coquereli
ENSCAPG00000017296	PRDM10	98	87.651	ENSPVAG00000012764	PRDM10	100	85.214	Pteropus_vampyrus
ENSCAPG00000017296	PRDM10	100	85.948	ENSRNOG00000007853	Prdm10	100	85.776	Rattus_norvegicus
ENSCAPG00000017296	PRDM10	100	86.858	ENSRBIG00000030924	PRDM10	100	87.119	Rhinopithecus_bieti
ENSCAPG00000017296	PRDM10	98	88.141	ENSRROG00000034334	PRDM10	100	85.800	Rhinopithecus_roxellana
ENSCAPG00000017296	PRDM10	100	86.684	ENSSBOG00000008773	PRDM10	100	86.945	Saimiri_boliviensis_boliviensis
ENSCAPG00000017296	PRDM10	99	80.392	ENSSHAG00000004503	PRDM10	99	80.904	Sarcophilus_harrisii
ENSCAPG00000017296	PRDM10	67	83.862	ENSSARG00000013953	-	62	85.393	Sorex_araneus
ENSCAPG00000017296	PRDM10	100	76.450	ENSSPUG00000001178	PRDM10	99	76.364	Sphenodon_punctatus
ENSCAPG00000017296	PRDM10	100	85.470	ENSSSCG00000015243	PRDM10	100	85.478	Sus_scrofa
ENSCAPG00000017296	PRDM10	100	76.746	ENSTGUG00000000530	PRDM10	100	76.405	Taeniopygia_guttata
ENSCAPG00000017296	PRDM10	92	97.464	ENSTBEG00000007221	PRDM10	81	97.464	Tupaia_belangeri
ENSCAPG00000017296	PRDM10	100	84.418	ENSTTRG00000009189	PRDM10	100	83.904	Tursiops_truncatus
ENSCAPG00000017296	PRDM10	90	91.379	ENSUAMG00000018832	PRDM10	96	86.200	Ursus_americanus
ENSCAPG00000017296	PRDM10	97	91.379	ENSUMAG00000003167	PRDM10	99	86.486	Ursus_maritimus
ENSCAPG00000017296	PRDM10	100	86.736	ENSVVUG00000019878	PRDM10	100	86.736	Vulpes_vulpes
ENSCAPG00000017296	PRDM10	97	67.703	ENSXETG00000032173	PRDM10	100	61.602	Xenopus_tropicalis